EY757962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD1_HUMAN (ATP-binding cassette sub-family D member 1 OS=Homo sapiens GN=ABCD1 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.921e-18 Identity = 59/184 (32.07%), Postives = 89/184 (48.37%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFIDQESLYNLS 569 PQRPY +GSLR Q+IYP +E++ RK S DL L+ V L +IL R + +W VLS GE+QR+ AR+ +P+ LLDE TSA+ E +++ + AGI +S+ HR +L+ +H +L Q + WK E +D + +L+ Sbjct: 543 PQRPYMSVGSLRDQVIYP-------------------------DSVEDMQRKGY--SEQDLEAILDVVHLHHILQREGGWEAMCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLL------QFDGEGGWKFEKLDSAARLSLT 693
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD2_RAT (ATP-binding cassette sub-family D member 2 OS=Rattus norvegicus GN=Abcd2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.692e-17 Identity = 61/185 (32.97%), Postives = 85/185 (45.95%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTD-DLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFIDQESLYNLS 569 PQRPY LGSLR Q+IYP ++V K TD DL L V L +I+ R D +W VLS GE+QR+ AR+ KP+ LLDE TSA+ E +++ AGI+ +S+ HR +L+ +H +L Q + W+ E +D LS Sbjct: 548 PQRPYMSLGSLRDQVIYP----------------------------DSVDDMHEKGYTDRDLEHILHSVHLYHIVQREGGWDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAIGAGISLLSITHRPSLWKYHTHLL------QFDGEGGWRFEQLDTAIRLTLS 698
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD1_MOUSE (ATP-binding cassette sub-family D member 1 OS=Mus musculus GN=Abcd1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.886e-17 Identity = 58/184 (31.52%), Postives = 89/184 (48.37%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFIDQESLYNLS 569 PQRPY +GSLR Q+IYP E+++ S Q+LE + L V L +IL R + +W VLS GE+QR+ AR+ +P+ LLDE TSA+ E +++ + AGI +S+ HR +L+ +H +L Q + WK E +D + +L+ Sbjct: 543 PQRPYMSVGSLRDQVIYPDSAEDMRRKG------------CSEQQLEAI---------------LGIVHLRHILQREGGWEAVCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLL------QFDGEGGWKFEKLDSAARLSLT 693
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: Y1467_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI1467 OS=Haemophilus influenzae GN=HI1467 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.398e-17 Identity = 56/160 (35.00%), Postives = 81/160 (50.62%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIE--AAGITYISVGHRRTLYDFHKRVLRI 491 PQRPY G+LR+ + YP + PS +L + ++D LG + LN + +W ++LS GE QR+AF R+LL+KP +V LDE+TSALDE E LY+ I+ + +SVGHR TL FH + L++ Sbjct: 459 PQRPYMPQGTLREAICYP----------------------------------NINPSHAELEQTMKDCALGKYIHALNVKN---DWQAILSPGELQRVAFIRILLTKPDVVFLDETTSALDETTENLLYQTIKERLPEMIILSVGHRSTLQQFHNKQLKL 581
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD2_DICDI (ABC transporter D family member 2 OS=Dictyostelium discoideum GN=abcD2 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.168e-16 Identity = 58/178 (32.58%), Postives = 83/178 (46.63%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFIDQE 551 PQ+PY VLG+LR Q+IYP + D K G+ + DDL L V + R + D T +W + LS G++QR+A ARL +PQ +LDE TSA+ + E +YE + GIT +V HR L +H VL + + W+ ID + Sbjct: 587 PQKPYLVLGTLRDQIIYPH-------SHDDMKKLGV--------------------TDDDLQHLLATVDPNLTIIRQWNWDDTKDWFTALSGGQKQRIAMARLFYHRPQYAILDECTSAVSDEVEGKIYETCKKLGITLFTVSHRPQLRAYHDYVLLF------NGRGGWEWSKIDHD 731
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD3_DICDI (ABC transporter D family member 3 OS=Dictyostelium discoideum GN=abcD3 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.528e-15 Identity = 53/182 (29.12%), Postives = 82/182 (45.05%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSL-------DTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFI 542 PQ+PY + G+L +Q++YP +K + + + + + Y+L R + D T+ W + LS GEQQ +A RL+ KP+ L+DESTS++ ++ E +Y + GIT ISVGHR +L +H +LR NW LE I Sbjct: 576 PQQPYLIFGTLEEQILYP------------------------------FSKKQKRIPKSIMRELFQRFDIDYLLDRERFIKKSAQVNDLTHNWLNQLSPGEQQLIAIIRLIYHKPKFALMDESTSSIPQSLEERVYSVAKELGITIISVGHRISLLKYHSTLLRF------DKDKNWYLEDI 721
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: ABCD1_DICDI (ABC transporter D family member 1 OS=Dictyostelium discoideum GN=abcD1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.528e-15 Identity = 53/182 (29.12%), Postives = 83/182 (45.60%), Query Frame = 3 Query: 18 PQRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSL-------DTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFI 542 PQ+PY + G+L +Q++YP +K + + + + ++ Y+L R + D T+ W + LS GEQQ +A RL+ KP+ L+DESTS++ ++ E +Y + GIT ISVGHR +L +H +LR NW LE I Sbjct: 561 PQQPYLIFGTLEEQILYP------------------------------FSKKQKRIPKSIMRELFQRFEIDYLLDRERFIKKSAQVNDLTHNWLNQLSPGEQQLIAIIRLIYHKPKFALMDESTSSIPQSLEERVYYVAKELGITIISVGHRISLLKYHSTLLRF------DKDKNWYLEDI 706
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: Y036_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI0036 OS=Haemophilus influenzae GN=HI0036 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.608e-15 Identity = 53/157 (33.76%), Postives = 77/157 (49.04%), Query Frame = 3 Query: 21 QRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYE--QIEAAGITYISVGHRRTLYDFHKRVL 485 Q+PY G+L L YP + + S ++ L V+LG++ +L + +W+ +LSLGEQQRLAFARL+L KP + LDE+T+++DE E +Y+ Q E T ISVGHR TL H++ L Sbjct: 460 QKPYVPQGNLMSALAYPNNADNI--------------------------------SHTQAVEILNKVQLGHLAEQL---EKEQDWTRILSLGEQQRLAFARLILHKPAVAFLDEATASMDEGLEFSMYQLLQQELPQTTIISVGHRSTLKTLHQQQL 581
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: PXA1_YEAST (Peroxisomal long-chain fatty acid import protein 2 OS=Saccharomyces cerevisiae GN=PXA1 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.751e-14 Identity = 54/179 (30.17%), Postives = 87/179 (48.60%), Query Frame = 3 Query: 18 PQRPYTVLG-SLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPR---LNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLRISTVDQNSSQSNWKLEFI 542 PQ+PY G +LR Q+IYP ++E K +L++ L +VKL Y+L R L LD +W +LS GE+QR+ FAR++ KP V+LDE+T+A+ E +L+ ++ +IS+ R TL +H+ +L I + W+L+ + Sbjct: 683 PQKPYFSRGGTLRDQIIYPMSSDEFFDRGFRDK---------------------------ELVQILVEVKLDYLLKRGVGLTYLDAIADWKDLLSGGEKQRVNFARIMFHKPLYVVLDEATNAISVDMEDYLFNLLKRYRFNFISISQRPTLIKYHEMLLEIG----ENRDGKWQLQAV 830
BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: Y1819_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv1819c/MT1867 OS=Mycobacterium tuberculosis GN=Rv1819c PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.095e-14 Identity = 57/159 (35.85%), Postives = 72/159 (45.28%), Query Frame = 3 Query: 21 QRPYTVLGSLRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQI--EAAGITYISVGHRRTLYDFHKRVLRI 491 Q PY LG+LR + YP SA +P T L V + P + LD +W+ VLS GEQQR+AFAR+LL+KP+ V LDESTSALD E LY+ + E ISV HR L H+ L + Sbjct: 498 QLPYVPLGTLRDVVCYPN-------------SAAAIPDATLRDTLTKVA----------------------LAPLCDRLDEERDWAKVLSPGEQQRVAFARILLTKPKAVFLDESTSALDTGLEFALYQLLRSELPDCIVISVSHRPALERLHENQLEL 621 The following BLAST results are available for this feature:
BLAST of EY757962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY757962 ID=EY757962; Name=EY757962; organism=Citrus sinensis; type=EST; length=859bpback to top |