EY757962

Overview
NameEY757962
Unique NameEY757962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY757962 vs. ExPASy Swiss-Prot
Match: PXA2_YEAST (Peroxisomal long-chain fatty acid import protein 1 OS=Saccharomyces cerevisiae GN=PXA2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.936e-13
Identity = 56/169 (33.14%), Postives = 83/169 (49.11%), Query Frame = 3 
Query:   18 PQRPYTVLGS-LRQQLIYPTWTEEVKPASDAAKSAGLVPFLTSAQKL-------ENVG----RKSSKPSTDDLIKALEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGHRRTLYDFHKRVLR 488
            PQRPY    S  R+Q+IYP   E+ K         G    +   Q L       EN+     +++SK  +  L  + ED +    +   ++      WS  L++G QQRLA AR+   KP+  +LDE TSA+    E  +YE  +  GI+ ISV HR +L+ FH  +L+
Sbjct:  553 PQRPYMGNRSTFREQIIYPDSIEQFKERYHNDYDLGDADLIKILQLLDLEDLVTENMSLLLAQRTSKNDSQQL--STEDNQSPCAIKVRDAFSIVRNWSEELTIGVQQRLAMARMYYHKPKFAVLDECTSAVAPEMEQRMYENAQNFGISLISVCHRTSLWHFHNYLLK 719
The following BLAST results are available for this feature:
BLAST of EY757962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PXA2_YEAST1.936e-1333.14Peroxisomal long-chain fatty acid import protein 1... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-F02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757962 ID=EY757962; Name=EY757962; organism=Citrus sinensis; type=EST; length=859bp
TTCGTCGACCCACGCGTCCGCAGAGACCATATACGGTTTTAGGTAGTCTT
CGTCAACAATTGATTTATCCTACGTGGACTGAAGAAGTGAAACCGGCGTC
TGATGCTGCGAAATCCGCTGGTTTAGTGCCATTCTTGACATCAGCACAAA
AATTGGAAAATGTGGGAAGAAAGTCTAGCAAGCCCTCAACAGATGATCTA
ATTAAGGCTCTAGAGGATGTCAAACTTGGCTATATCTTGCCTCGTCTCAA
TAGCTTGGACACAACATATGAGTGGTCCAGTGTTCTGTCCCTTGGGGAGC
AGCAGCGCCTTGCTTTTGCACGTTTGTTGCTTTCAAAACCACAGATAGTT
CTATTGGATGAGTCTACCAGTGCTTTAGACGAAGCCAACGAGGCTCATTT
ATATGAGCAAATTGAAGCAGCAGGCATAACATATATTAGTGTCGGCCATC
GGCGAACCTTGTATGATTTCCACAAAAGGGTGTTGCGCATATCCACAGTG
GATCAGAACAGTAGTCAAAGTAATTGGAAGCTTGAGTTTATTGATCAAGA
ATCCTTGTATAATCTGTCAAGGCGATAGTAACTGCCCATGTAGTCAATGA
TTCTCTTTCATCANGTGATTAATACCTAGTCATATTGGAAAGATGAAGCA
AGACGNTGGAGGGCTTTCTTGNTAGAACCGTACATTGAAAATGGGCTATT
GTATGACCCAAATCAGATTTTGCCCATTTCTGTATATTTTCCACTCAGTT
TCCGGGCAGCAATTAATACCCCTGTNCTGCTTTCATGTAAGAACCGTACA
TTGAAAATAGCTATTGTAATGACTCAAATAAGATTTTGCCCAAAAAAAAA
AAAAAAAAA
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