EY757938

Overview
NameEY757938
Unique NameEY757938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.440e-23
Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            +YP   PKV F T+IYHPNI+  G ICLDIL+D+WSPAL I  VLLSI +LL+ PNPDDPL   IA  +KT+ +    +A+EWTR YA
Sbjct:   59 DYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYA 146          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.440e-23
Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 271
            +YP   PKV F TK+YHPNI+  G ICLDILK++WSPAL +  VLLSI +LL+ PNPDDPL   IA  +KT+  +   TA+ WT+ YA G
Sbjct:   59 DYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.881e-23
Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            EYP   PKV F T+IYHPN++  G ICLDIL+ +WSPAL I  VLLSI +LL  PNPDDPL   IA+ +KT+  +   TA+EWT+ YA
Sbjct:   59 EYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYA 146          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.881e-23
Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            EYP   PKV F T+IYHPN++  G ICLDIL+ +WSPAL I  VLLSI +LL  PNPDDPL   IA+ +KT+  +   TA+EWT+ YA
Sbjct:   59 EYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYA 146          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.457e-23
Identity = 52/88 (59.09%), Postives = 63/88 (71.59%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            +YP   PKV F T+IYHPNI+  G ICLDIL+ +WSPAL I  VLLSI +LL  PNPDDPL   IA+ +KT+  +  E A+EWTR YA
Sbjct:   59 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 146          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.457e-23
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 271
            +YP   PKV F TK++HPNI+  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL   IA  +KT++ +   TA+ WT+ YA G
Sbjct:   59 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.209e-23
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 271
            +YP   PKV F TK++HPNI+  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL   IA  +KT++ +   TA+ WT+ YA G
Sbjct:   59 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.191e-23
Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            +YP   PK+ F TKIYHPNI+  G ICLDILKD+WSPAL +  VLLSI +LL+  NPDDPL   IA  +KT+  +   TA+EWT+ YA
Sbjct:   60 DYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKYA 147          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.148e-23
Identity = 53/91 (58.24%), Postives = 60/91 (65.93%), Query Frame = 2
Query:    5 YPMAAPKVRFLTKIYHPNIDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            YP   PK+RFLT IYHPNID  GRICLDILK      W PAL I TVL SIQ L+S PNPDDPL  +I+  +K N A     AK+WT  +A
Sbjct:   61 YPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEFKYNRAVFFSNAKKWTEKHA 151          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.219e-22
Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            +YP+  PK+   TKIYHPNI+  G ICLDILKD+WSPAL I  VLLSI +LL+  NPDDPL   IA  +K +  +   TAKEWT+ YA
Sbjct:   59 DYPLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKKYA 146          
The following BLAST results are available for this feature:
BLAST of EY757938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
UBC4_SCHPO1.440e-2359.09Ubiquitin-conjugating enzyme E2 4 OS=Schizosacchar... [more]
UBC30_ARATH1.440e-2356.67Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
U2D2B_RAT1.881e-2357.95Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norv... [more]
U2D2B_MOUSE1.881e-2357.95Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculu... [more]
UBCD1_DROME2.457e-2359.09Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophi... [more]
UBC10_ARATH2.457e-2356.67Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC9_ARATH3.209e-2356.67SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC4_YEAST4.191e-2357.95Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces... [more]
UBE2T_XENLA7.148e-2358.24Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevi... [more]
UBC4_CANAL1.219e-2257.95Ubiquitin-conjugating enzyme E2 4 OS=Candida albic... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757938 ID=EY757938; Name=EY757938; organism=Citrus sinensis; type=EST; length=476bp
AGAATATCCTATGGCTGCTCCAAAGGTCCGATTTCTTACCAAGATATATC
ATCCTAACATTGATAAGCTTGGAAGGATTTGTCTTGATATTCTGAAAGAC
AAGTGGAGTCCAGCTCTCCAGATTCGGACTGTACTGTTGAGCATTCAAGC
ACTTCTGAGTGCTCCTAACCCCGATGATCCTCTCTCCGAGAACATTGCCA
AACACTGGAAAACAAATGAGGCCGAAGCAGTTGAAACAGCGAAGGAATGG
ACACGTTTATATGCCAGTGGTGCTTGATGACATGGTGGAAAATATCACTT
CATTCAAATAACAATTGTGCAATGTATGCTATTCACTGTCTGTTTAAAAT
GGAAAATTTGGAAGAATTGAATTGATGTTTGAACATTCGGAGTTTGACAT
TCTGAAAGCTTCCATCTTACCGCACATGTCAATTATTTTCTTCTTGTGGA
AAAAAAAAAAAAAAAAAAAAAAAAAA
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