EY757938

Overview
NameEY757938
Unique NameEY757938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 3.922e-21
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 2
Query:    5 YPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            YP   PKVRF+TKI+HPNI  + G ICLDILKD+W+ A+ +RTVLLS+QALL+A  PDDP    +A  +K N     +TA+ W  +YA
Sbjct:   66 YPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 3.922e-21
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 2
Query:    5 YPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            YP   PKVRF+TKI+HPNI  + G ICLDILKD+W+ A+ +RTVLLS+QALL+A  PDDP    +A  +K N     +TA+ W  +YA
Sbjct:   66 YPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 3.922e-21
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 2
Query:    5 YPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            YP   PKVRF+TKI+HPNI  + G ICLDILKD+W+ A+ +RTVLLS+QALL+A  PDDP    +A  +K N     +TA+ W  +YA
Sbjct:   66 YPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.922e-21
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 268
            EYP   PKV F T+IYH NI+  G ICLDILKD WSPAL I  VLLSI +LL+  NP DPL  +IA  + TN AE    A++WT+ YA+
Sbjct:  105 EYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 193          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.922e-21
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 268
            EYP   PKV F T+IYH NI+  G ICLDILKD WSPAL I  VLLSI +LL+  NP DPL  +IA  + TN AE    A++WT+ YA+
Sbjct:  105 EYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 193          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.123e-21
Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            +YP   PKV F T+IYHPNI+    ICLDIL+ +WSPAL I  VLLSI +LL  PNPDDPL   IA+ +KT+  +    ++EWT+ YA
Sbjct:   59 DYPFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.691e-21
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 268
            EYP   PK++F TK+YHPNI  + G ICLDILK+ WSP + +++ L+S+QALL +P P+DP    +A+H+  +     +TA  WTRLYAS
Sbjct:   61 EYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 150          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 8.738e-21
Identity = 49/90 (54.44%), Postives = 61/90 (67.78%), Query Frame = 2
Query:    5 YPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 271
            YP   PKVRF+T+I+HPNI  + G ICLDILKD W+ A+ +RTVLLS+QALL+A  PDDP    +A  +K      + TAK WT  YA G
Sbjct:   66 YPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKDKYDLFLLTAKHWTNAYAGG 155          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 8.738e-21
Identity = 50/89 (56.18%), Postives = 61/89 (68.54%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 268
            +YP   PKV F T+IYH NI+  G ICLDILKD WSPAL I  VLLSI +LL+  NP DPL  +IA  + TN AE    A++WT+ YA+
Sbjct:  113 DYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 201          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 8.738e-21
Identity = 50/89 (56.18%), Postives = 61/89 (68.54%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 268
            +YP   PKV F T+IYH NI+  G ICLDILKD WSPAL I  VLLSI +LL+  NP DPL  +IA  + TN AE    A++WT+ YA+
Sbjct:  113 DYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 201          
The following BLAST results are available for this feature:
BLAST of EY757938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
UBE2K_MOUSE3.922e-2154.55Ubiquitin-conjugating enzyme E2 K OS=Mus musculus ... [more]
UBE2K_HUMAN3.922e-2154.55Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens ... [more]
UBE2K_BOVIN3.922e-2154.55Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN... [more]
UB2E1_MOUSE3.922e-2157.30Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus... [more]
UB2E1_HUMAN3.922e-2157.30Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens... [more]
UB2D3_BOVIN5.123e-2154.55Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus G... [more]
UBC1_YEAST6.691e-2150.00Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharo... [more]
UBCD4_DROME8.738e-2154.44Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophi... [more]
UB2E2_MOUSE8.738e-2156.18Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus... [more]
UB2E2_HUMAN8.738e-2156.18Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757938 ID=EY757938; Name=EY757938; organism=Citrus sinensis; type=EST; length=476bp
AGAATATCCTATGGCTGCTCCAAAGGTCCGATTTCTTACCAAGATATATC
ATCCTAACATTGATAAGCTTGGAAGGATTTGTCTTGATATTCTGAAAGAC
AAGTGGAGTCCAGCTCTCCAGATTCGGACTGTACTGTTGAGCATTCAAGC
ACTTCTGAGTGCTCCTAACCCCGATGATCCTCTCTCCGAGAACATTGCCA
AACACTGGAAAACAAATGAGGCCGAAGCAGTTGAAACAGCGAAGGAATGG
ACACGTTTATATGCCAGTGGTGCTTGATGACATGGTGGAAAATATCACTT
CATTCAAATAACAATTGTGCAATGTATGCTATTCACTGTCTGTTTAAAAT
GGAAAATTTGGAAGAATTGAATTGATGTTTGAACATTCGGAGTTTGACAT
TCTGAAAGCTTCCATCTTACCGCACATGTCAATTATTTTCTTCTTGTGGA
AAAAAAAAAAAAAAAAAAAAAAAAAA
back to top