EY757938

Overview
NameEY757938
Unique NameEY757938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.141e-20
Identity = 50/89 (56.18%), Postives = 61/89 (68.54%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 268
            +YP   PKV F T+IYH NI+  G ICLDILKD WSPAL I  VLLSI +LL+  NP DPL  +IA  + TN AE    A++WT+ YA+
Sbjct:  119 DYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT 207          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.141e-20
Identity = 50/89 (56.18%), Postives = 61/89 (68.54%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 268
            +YP   PKV F T+IYH NI+  G ICLDILKD WSPAL I  VLLSI +LL+  NP DPL  +IA  + TN AE    A++WT+ YA+
Sbjct:  119 DYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT 207          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.141e-20
Identity = 50/89 (56.18%), Postives = 61/89 (68.54%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 268
            +YP   PKV F T+IYH NI+  G ICLDILKD WSPAL I  VLLSI +LL+  NP DPL  +IA  + TN AE    A++WT+ YA+
Sbjct:  119 DYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT 207          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.947e-20
Identity = 47/88 (53.41%), Postives = 61/88 (69.32%), Query Frame = 2
Query:    5 YPMAAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            YP   PK++F TK++HPNI  + G ICLDILKD+WSPAL ++T L+SIQALLSAP P DP    +A+ +  N    V TA+ WT  +A
Sbjct:   62 YPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTETFA 149          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.337e-20
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 2
Query:    5 YPMAAPKVRFLTKIYHPNIDKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 265
            YP   P++RFLT IYHPNID  GRICLD+LK      W P+L I T+L  IQ L++ PNPDDPL  +I+  +K N+    + A++WT  +A
Sbjct:   61 YPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHA 151          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.152e-19
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 268
            +YP   PK  F T IYHPNI+  G IC++ILKDKW+PAL +  VLLSI  LL  PNPDDPL   I + +K N  +  + A+E+T  +A+
Sbjct:   65 DYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHAN 153          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.671e-19
Identity = 49/89 (55.06%), Postives = 58/89 (65.17%), Query Frame = 2
Query:    2 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 268
            EYP   PKV F T+IYH NI+  G ICLDILKD WSPAL I  VLLSI +LL+  NP DPL  +IA  +  N  E    A+ WT+ YA+
Sbjct:  144 EYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYAT 232          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.262e-19
Identity = 43/73 (58.90%), Postives = 51/73 (69.86%), Query Frame = 2
Query:    5 YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEA 223
            YP  AP V+FLT  YHPN+D  G ICLDILKDKWS    +RT+LLSIQ+LL  PN D PL+ + A+ WK   A
Sbjct:   89 YPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.262e-19
Identity = 43/73 (58.90%), Postives = 51/73 (69.86%), Query Frame = 2
Query:    5 YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEA 223
            YP  AP V+FLT  YHPN+D  G ICLDILKDKWS    +RT+LLSIQ+LL  PN D PL+ + A+ WK   A
Sbjct:   89 YPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161          
BLAST of EY757938 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.262e-19
Identity = 43/73 (58.90%), Postives = 51/73 (69.86%), Query Frame = 2
Query:    5 YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEA 223
            YP  AP V+FLT  YHPN+D  G ICLDILKDKWS    +RT+LLSIQ+LL  PN D PL+ + A+ WK   A
Sbjct:   89 YPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161          
The following BLAST results are available for this feature:
BLAST of EY757938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
UB2E3_MOUSE1.141e-2056.18Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus... [more]
UB2E3_HUMAN1.141e-2056.18Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens... [more]
UB2E3_BOVIN1.141e-2056.18Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus G... [more]
UBC27_ARATH1.947e-2053.41Ubiquitin carrier protein E2 27 OS=Arabidopsis tha... [more]
UBE2T_BOVIN4.337e-2049.45Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN... [more]
UBC31_ARATH2.152e-1950.56Probable ubiquitin carrier protein E2 31 OS=Arabid... [more]
UBCD2_DROME3.671e-1955.06Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophi... [more]
UBE2C_MOUSE6.262e-1958.90Ubiquitin-conjugating enzyme E2 C OS=Mus musculus ... [more]
UBE2C_MACFA6.262e-1958.90Ubiquitin-conjugating enzyme E2 C OS=Macaca fascic... [more]
UBE2C_BOVIN6.262e-1958.90Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757938 ID=EY757938; Name=EY757938; organism=Citrus sinensis; type=EST; length=476bp
AGAATATCCTATGGCTGCTCCAAAGGTCCGATTTCTTACCAAGATATATC
ATCCTAACATTGATAAGCTTGGAAGGATTTGTCTTGATATTCTGAAAGAC
AAGTGGAGTCCAGCTCTCCAGATTCGGACTGTACTGTTGAGCATTCAAGC
ACTTCTGAGTGCTCCTAACCCCGATGATCCTCTCTCCGAGAACATTGCCA
AACACTGGAAAACAAATGAGGCCGAAGCAGTTGAAACAGCGAAGGAATGG
ACACGTTTATATGCCAGTGGTGCTTGATGACATGGTGGAAAATATCACTT
CATTCAAATAACAATTGTGCAATGTATGCTATTCACTGTCTGTTTAAAAT
GGAAAATTTGGAAGAATTGAATTGATGTTTGAACATTCGGAGTTTGACAT
TCTGAAAGCTTCCATCTTACCGCACATGTCAATTATTTTCTTCTTGTGGA
AAAAAAAAAAAAAAAAAAAAAAAAAA
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