EY757931

Overview
NameEY757931
Unique NameEY757931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9639 contig Csv1_Contig9639:454..1032. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY757931 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.666e-66
Identity = 120/128 (93.75%), Postives = 123/128 (96.09%), Query Frame = 3
Query:   12 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 395
            FSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEA AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT   PGK
Sbjct:  129 FSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPGK 256          
BLAST of EY757931 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 8.168e-66
Identity = 119/128 (92.97%), Postives = 124/128 (96.88%), Query Frame = 3
Query:   12 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 395
            FSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+ PEAFAELKVKE+KNGRLAMFSMFGFFV AIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  101 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228          
BLAST of EY757931 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.067e-65
Identity = 117/128 (91.41%), Postives = 123/128 (96.09%), Query Frame = 3
Query:   12 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 395
            FSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLG V DPLYPGGSFDPLGLA+DPEAFAELKVKE KNGRLAMFSMFGFF+QAIVTGKGPLENLADHL DPVNNNAW+YATNFVP K
Sbjct:  140 FSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVPRK 267          
BLAST of EY757931 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.376e-65
Identity = 116/128 (90.62%), Postives = 124/128 (96.88%), Query Frame = 3
Query:   12 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 395
            FSEGGLDYLGNPSL+HAQSIL+IWA QV+LMGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLA+DPE  AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  137 FSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264          
BLAST of EY757931 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 4.054e-65
Identity = 116/128 (90.62%), Postives = 124/128 (96.88%), Query Frame = 3
Query:   12 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 395
            FS+GGLDYLGNPSL+HAQS+LAIWACQVVLMGAVEGYRIAGGPLGE+ DPLYPGGSFDPLGLA+ P+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE+LADH+ADPVNNNAW  ATNFVPGK
Sbjct:  139 FSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266          
BLAST of EY757931 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 1.179e-64
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 3
Query:   12 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 395
            FSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYR+ GGPLGE  DP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct:  138 FSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265          
BLAST of EY757931 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.482e-64
Identity = 116/127 (91.34%), Postives = 120/127 (94.49%), Query Frame = 3
Query:   12 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 392
            FSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLADPV NNAWAYA    PG
Sbjct:  141 FSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267          
BLAST of EY757931 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.482e-64
Identity = 119/129 (92.25%), Postives = 123/129 (95.35%), Query Frame = 3
Query:   12 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 395
            FSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  138 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266          
BLAST of EY757931 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 5.854e-64
Identity = 114/128 (89.06%), Postives = 122/128 (95.31%), Query Frame = 3
Query:   12 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 395
            FSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+ GGPLGE  DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADH+ADPV NNAWA+ATNFVPGK
Sbjct:  137 FSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPGK 264          
BLAST of EY757931 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.224e-63
Identity = 113/128 (88.28%), Postives = 121/128 (94.53%), Query Frame = 3
Query:   12 FSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 395
            FSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPLGE  D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ DPV NNAWAYATNFVPGK
Sbjct:  138 FSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265          
The following BLAST results are available for this feature:
BLAST of EY757931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
CB22_SOYBN3.666e-6693.75Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB21_PEA8.168e-6692.97Chlorophyll a-b binding protein AB96 (Fragment) OS... [more]
CB22_PETSP1.067e-6591.41Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB23_APIGR2.376e-6590.63Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_WHEAT4.054e-6590.63Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_GOSHI1.179e-6490.63Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB2_PHYPA4.482e-6491.34Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_SINAL4.482e-6492.25Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB21_LEMGI5.854e-6489.06Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB24_SOLLC2.224e-6388.28Chlorophyll a-b binding protein 4, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-C03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757931 ID=EY757931; Name=EY757931; organism=Citrus sinensis; type=EST; length=579bp
CACGCGTCCGCTTCAGCGAGGGCGGGCTAGACTACTTGGGAAACCCAAGC
TTGATCCACGCCCAGAGCATCTTGGCCATCTGGGCTTGCCAGGTGGTCTT
GATGGGAGCCGTTGAGGGTTACAGAATTGCTGGAGGGCCGCTCGGTGAAG
TGACTGACCCATTGTACCCAGGTGGCAGCTTTGATCCATTGGGTTTGGCT
GATGACCCGGAGGCTTTTGCTGAGCTCAAGGTTAAGGAAATCAAGAATGG
AAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTCGTTCAGGCCATTGTCA
CCGGCAAGGGACCGTTAGAGAACTTGGCCGACCACTTGGCCGACCCTGTC
AACAACAATGCCTGGGCCTACGCCACCAACTTTGTCCCCGGAAAGTGAGC
TTCGGTTGATAACATTAGTAGCGTGGAAATTGGAATTGAGAGTGATTGGT
TATTGATGTGACTCTATTTCAACTTGCAAAACATGTGAATTATGTAATGT
ACTGCTACTACTAGTTTGAGGGGATTGTATTTTAAAAAAAAAAAAAAAAA
AAAAAACAAAAAAAAAAAAAAAAAAAAAA
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