EY757928

Overview
NameEY757928
Unique NameEY757928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.270e-46
Identity = 87/136 (63.97%), Postives = 107/136 (78.68%), Query Frame = 3
Query:  336 LFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSP 743
            LFEAL++ ++EEM+R+  V ++GED+GHYGGSYKVT+GL  KYG  RV+DTPIAE SF G  +GAA TGL P+VEGMNM F+LLA++QISNN GML  TSGG F +P+V+RGPGG G+QLGAEHS  L   F   P
Sbjct:    6 LFEALQKAIDEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAEYSFVGAAVGAAATGLIPVVEGMNMAFILLAYSQISNNMGMLCATSGGHFQVPMVLRGPGGIGKQLGAEHSQRLESYFQSVP 141          

HSP 2 Score: 20.4014 bits (41), Expect = 4.270e-46
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1
Query:  817 PSILFEHVLLLHLK 858
            P +  EHVLL +LK
Sbjct:  167 PILFIEHVLLYNLK 180          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 5.970e-35
Identity = 66/125 (52.80%), Postives = 88/125 (70.40%), Query Frame = 3
Query:  336 LFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHS 710
            L EALR+ + EEM RD  V VMGE+V  Y G+YKVT+GL  ++G  RV+DTPI+E  F+G+G+GAAM GLRP++E M M F + A + I N+    HY SGGQ   PIV RGP G+  ++GA+H+
Sbjct:  141 LREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAAPRVGAQHT 265          

HSP 2 Score: 28.4906 bits (62), Expect = 5.970e-35
Identity = 13/40 (32.50%), Postives = 23/40 (57.50%), Query Frame = 2
Query:  710 QRLESYFQSIPGIQMVACSTPXHXXXLMXAAIRSENPVYF 829
            Q    ++ ++PG+ ++A         L+ AAIRS++PV F
Sbjct:  266 QNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVF 305          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.502e-32
Identity = 67/142 (47.18%), Postives = 90/142 (63.38%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            E+ + +AL   ++EEM  DP V VMGE+VG Y G+YK+TKGL +KYG  RV DTPI E  FTG+G+GAA  GL+P+VE M   F + A + I N+    +Y S GQ  +PIV RGP G+   +GA+HS   +  +   P  K
Sbjct:   35 EMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLK 176          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.562e-32
Identity = 67/142 (47.18%), Postives = 92/142 (64.79%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            ++ + EALR+ ++EEM RD  V VMGE+V  Y G+YKVT+GL +++G  RV+DTPI E  F G+ +GAA  GLRPIVE M   F + AF+ I N+    HY SGGQ   PIV RGP G+  ++ A+HS   +  ++  P  K
Sbjct:    2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAASRVAAQHSQNYTACYSHVPGLK 143          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.707e-32
Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            ++ + EALR+ ++EEM RD  V V+GE+V  Y G+YKVT+GL +++G  RV+DTPI E  F G+ +GAA  GLRPIVE M   F + AF+ I N+    HY SGGQ   PIV RGP G+  ++ A+HS   +  ++  P  K
Sbjct:    2 QITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLK 143          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.707e-32
Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            ++ + EALR+ ++EEM RD  V V+GE+V  Y G+YKVT+GL +++G  RV+DTPI E  F G+ +GAA  GLRPIVE M   F + AF+ I N+    HY SGGQ   PIV RGP G+  ++ A+HS   +  ++  P  K
Sbjct:    2 QITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLK 143          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.707e-32
Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            ++ + EALR+ ++EEM RD  V V+GE+V  Y G+YKVT+GL +++G  RV+DTPI E  F G+ +GAA  GLRPIVE M   F + AF+ I N+    HY SGGQ   PIV RGP G+  ++ A+HS   +  ++  P  K
Sbjct:    2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLK 143          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            ++ + EALR+ ++EEM RD  V VMGE+V  Y G+YKVT+GL +++G  RV+DTPI E  F G+ +GAA  GLRPIVE M   F + A + I N+    HY SGGQ   PIV RGP G+  ++ A+HS   +  ++  P  K
Sbjct:    2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCPIVFRGPNGAASRVAAQHSQNYAACYSYIPGLK 143          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.660e-31
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFKW---WHARPH 773
            E+ + +A+   L+EE+ RD  V +MGE+V  Y G+YK+TKGL DKYG  R++DTPI E  F G+G+GAAM G RPI+E M   F + A + I N+    HY SGG+   PIV RGP G    +GA+HS   +  +   P  K    W A  H
Sbjct:   28 EVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFNPIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADH 179          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.831e-31
Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 3
Query:  342 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            EALR+ + EEM  +  V VMGE+V  Y G+YKVT+GL  ++G  RV+DTPI E+ F G+G+GAAMTGLRPIVE M   F + A +QI N+     Y SGGQ   PIV RGP G+  ++ A+HS   +  ++  P  K
Sbjct:  142 EALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPSGAAARVAAQHSQCYAAWYSHIPGLK 278          
The following BLAST results are available for this feature:
BLAST of EY757928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ODPB_CHLAT4.270e-4663.97Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_ZYMMO5.970e-3552.80Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_ARATH1.502e-3247.18Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_RICFE2.562e-3247.18Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICTY5.707e-3246.48Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICPR5.707e-3246.48Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICCN5.707e-3246.48Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICBR1.271e-3146.48Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_DICDI1.660e-3144.74Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_RHIME4.831e-3148.91Pyruvate dehydrogenase E1 component subunit beta O... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-B11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757928 ID=EY757928; Name=EY757928; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGTTCTTTCAGTTAATAAGAAAAACCTCTCGCAGTTCTTCA
AATCGAATCGAATCGAATCCAATGGCTGCAATTTTCCTGGGCGTGGGAGC
TGCAACGGCTTTATCACCGTCCAATTGCTTCGATTCTAAGAAGTTCCAGC
TCTCAACTCGCAGATCTCTCTCAGGACGGAAACCGTGGTTCTTAGTTGTC
AGATCTGATGGAAGCGTCAACTTAGGCTCGAATCAAAGATCCCGGAGGAC
TCAACAGTTGATCACTAATGCAGTTGCAACGAAGGCTGATTCGGCAGCTT
CTACTTCGGCATCAAAGCAAGGGCACGAACTTTTACTTTTTGAAGCTCTA
CGAGAAGGCTTGGAAGAAGAAATGGACAGAGATCCACATGTATGTGTCAT
GGGTGAAGATGTTGGTCACTATGGGGGTTCGTACAAAGTGACCAAAGGCC
TGGCTGATAAGTATGGGGATCTCAGGGTTCTTGACACCCCTATTGCTGAG
AACTCTTTCACTGGTATGGGCATTGGGGCTGCCATGACTGGCTTGAGGCC
AATTGTTGAAGGAATGAACATGGGATTTCTTCTTTTAGCTTTCAACCAGA
TCTCCAACAACTGTGGTATGCTCCACTATACTTCTGGTGGGCAGTTTACC
ATACCAATAGTTATCCGTGGACCTGGTGGGAGTGGCCGACAACTTGGAGC
TGAGCATTCCAACGCCTTGAGTCATATTTTCAATCAATCCCCGGAATTCA
AATGGTGGCATGCTCGACCCCATANCATGNCNAGGNCTTGATGAANGCTG
CAATCCGAAGTGAGAACCCAGTATACTTTTCGAGCATGTGTTGCTTTTAC
ACCTCAAGGAAAGATTCAGANTGAGATACATTTGTA
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