EY757928

Overview
NameEY757928
Unique NameEY757928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.310e-31
Identity = 61/137 (44.53%), Postives = 90/137 (65.69%), Query Frame = 3
Query:  342 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            EA+ +G++EE++RD  V ++GE+V  Y G+YKV++GL  KYGD R++DTPI+E  F G+ +GAAM GLRPI E M   F + A +Q+ N+    +Y SGG  ++PIV RGP G+   + A+HS   +  +   P  K
Sbjct:   37 EAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLK 173          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.398e-30
Identity = 61/142 (42.96%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            +L + EA+ +G++EE++RD  V ++GE+V  Y G+YKV++GL  KYGD R++DTPI+E  F G+ +GAAM GLRPI E M   F + A +Q+ N+    +Y S G   +PIV RGP G+   + A+HS   +  +   P  K
Sbjct:   32 QLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLK 173          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.398e-30
Identity = 60/137 (43.80%), Postives = 89/137 (64.96%), Query Frame = 3
Query:  342 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            +A+ +G++EE++RD  V ++GE+V  Y G+YKV++GL  KYGD R++DTPI+E  F G+ +GAAM GLRPI E M   F + A +Q+ N+    +Y SGG   +PIV RGP G+   + A+HS   +  +   P  K
Sbjct:   37 DAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLK 173          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.398e-30
Identity = 61/142 (42.96%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            +L + EA+ +G++EE++RD  V ++GE+V  Y G+YKV++GL  KYGD R++DTPI+E  F G+ +GAAM GLRPI E M   F + A +Q+ N+    +Y S G   +PIV RGP G+   + A+HS   +  +   P  K
Sbjct:   32 QLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLK 173          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 2.398e-30
Identity = 60/137 (43.80%), Postives = 89/137 (64.96%), Query Frame = 3
Query:  342 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            +A+ +G++EE++RD  V ++GE+V  Y G+YKV++GL  KYGD R++DTPI+E  F G+ +GAAM GLRPI E M   F + A +Q+ N+    +Y SGG   +PIV RGP G+   + A+HS   +  +   P  K
Sbjct:   37 DAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLK 173          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.132e-30
Identity = 65/142 (45.77%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            ++ + +AL   L+ EM  D  V +MGE+VG Y G+YKVTKGL +KYG  RVLDTPI E  FTG+G+GAA  GL+P+VE M   F + A + I N+    +Y S GQ ++PIV RG  G    +GA+HS+  +  +   P  K
Sbjct:   25 QMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLK 166          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.190e-29
Identity = 62/137 (45.26%), Postives = 87/137 (63.50%), Query Frame = 3
Query:  342 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            EAL   + EE+DRD  V ++GE+V  Y G+YKV+KGL D++G+ RV+DTPI E  FTG+ +GAA+ GL+PIVE M+  F + A + + N+    HY SGG     +V RGP G+   +GA+HS   S  +   P  K
Sbjct:   43 EALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKCQMVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLK 179          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.007e-28
Identity = 61/137 (44.53%), Postives = 85/137 (62.04%), Query Frame = 3
Query:  342 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            +AL + ++EE+ RD  V +MGE+V  Y G+YK++KGL  K+GD RV+DTPI E  F G+ +GAA  GLRPI E M   F + A +QI N+    +Y S G+  +PIV RGP G+   + A+HS   S  +   P  K
Sbjct:   29 DALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVPIVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLK 165          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.530e-28
Identity = 62/142 (43.66%), Postives = 83/142 (58.45%), Query Frame = 3
Query:  327 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            E+ + +AL   +EEEM RD  V ++GE+V  Y G+YK+++GL DK+G  RV+DTPI E  FTG+  GAA  GLRPI E M   F + A + I N+     Y SGG    PIV RGP G    + A+HS   +  +   P  K
Sbjct:   37 EMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQACPIVFRGPNGPAAAVAAQHSQHFAPWYGSIPGLK 178          
BLAST of EY757928 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.481e-27
Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 3
Query:  342 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPIVIRGPGGSGRQLGAEHSNALSHIFNQSPEFK 752
            +AL   L+EE+ RD  V ++GE+V  Y G+YK++KGL  KYGD R+ DTPI E +  G+ +GAAM GLRPI E M+M F +   + I N+    HY S G+F +PIV RG  G+   +  +HS   +  F   P  K
Sbjct:   38 DALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHVPIVFRGANGAAVGVAQQHSQDFTAWFMHCPGVK 174          
The following BLAST results are available for this feature:
BLAST of EY757928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ODPB_BOVIN6.310e-3144.53Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_RAT2.398e-3042.96Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_PONAB2.398e-3043.80Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_MOUSE2.398e-3042.96Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_HUMAN2.398e-3043.80Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_PEA3.132e-3045.77Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_YEAST1.190e-2945.26Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_CAEEL1.007e-2844.53Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_SCHPO6.530e-2843.66Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_ASCSU2.481e-2743.80Pyruvate dehydrogenase E1 component subunit beta, ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-B11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757928 ID=EY757928; Name=EY757928; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGTTCTTTCAGTTAATAAGAAAAACCTCTCGCAGTTCTTCA
AATCGAATCGAATCGAATCCAATGGCTGCAATTTTCCTGGGCGTGGGAGC
TGCAACGGCTTTATCACCGTCCAATTGCTTCGATTCTAAGAAGTTCCAGC
TCTCAACTCGCAGATCTCTCTCAGGACGGAAACCGTGGTTCTTAGTTGTC
AGATCTGATGGAAGCGTCAACTTAGGCTCGAATCAAAGATCCCGGAGGAC
TCAACAGTTGATCACTAATGCAGTTGCAACGAAGGCTGATTCGGCAGCTT
CTACTTCGGCATCAAAGCAAGGGCACGAACTTTTACTTTTTGAAGCTCTA
CGAGAAGGCTTGGAAGAAGAAATGGACAGAGATCCACATGTATGTGTCAT
GGGTGAAGATGTTGGTCACTATGGGGGTTCGTACAAAGTGACCAAAGGCC
TGGCTGATAAGTATGGGGATCTCAGGGTTCTTGACACCCCTATTGCTGAG
AACTCTTTCACTGGTATGGGCATTGGGGCTGCCATGACTGGCTTGAGGCC
AATTGTTGAAGGAATGAACATGGGATTTCTTCTTTTAGCTTTCAACCAGA
TCTCCAACAACTGTGGTATGCTCCACTATACTTCTGGTGGGCAGTTTACC
ATACCAATAGTTATCCGTGGACCTGGTGGGAGTGGCCGACAACTTGGAGC
TGAGCATTCCAACGCCTTGAGTCATATTTTCAATCAATCCCCGGAATTCA
AATGGTGGCATGCTCGACCCCATANCATGNCNAGGNCTTGATGAANGCTG
CAATCCGAAGTGAGAACCCAGTATACTTTTCGAGCATGTGTTGCTTTTAC
ACCTCAAGGAAAGATTCAGANTGAGATACATTTGTA
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