EY757924

Overview
NameEY757924
Unique NameEY757924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19
Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  127 ITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            ++CG V T +A CI +L+  G  P   CC+GV+ L  +A TT DR+ AC CL  A  TI G+   +AA LP +CGV+IPY I+PST+C +V
Sbjct:    1 LSCGDVATQMASCINYLRGAGPLPAA-CCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.626e-18
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            AITCGQV+++L PC  + K  G  P   CCSGV+ L G A +T D+QA C CLK   G     +   AA +P +CGV++PY I+ S DCS++
Sbjct:   26 AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAYNAGR---AAGIPSRCGVSVPYTISASVDCSKI 114          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.430e-18
Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            A++CG VT+S+APC+ ++      P   CCSGVR LNG A ++ DR+ AC+CLK    + R +    AA +P +CGV++ + I+ S DCS++
Sbjct:   29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.430e-18
Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            A++CG VT+S+APC+ ++      P   CCSGVR LNG A ++ DR+ AC+CLK    + R +    AA +P +CGV++ + I+ S DCS++
Sbjct:   29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.641e-18
Identity = 48/108 (44.44%), Postives = 61/108 (56.48%), Query Frame = 1
Query:   82 LCFCAFWRLAPVTN--AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            L F       P+T+  A++CG V+  +APCI +L       P  CCSGV  LN  A TTPDRQ AC CL  A   +  I    AA LP+ CGV IPY I+ +T+C+ V
Sbjct:   10 LIFACMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSV 117          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.979e-18
Identity = 43/93 (46.24%), Postives = 59/93 (63.44%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPP-CCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            A+TC  VT +L PC+ +LK  G  PPP  CC+GVR L  AA T  DR+ ACNC+K A    + +   VAA L  QCGV + Y+++P+ +C+ V
Sbjct:    1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSV 93          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.979e-18
Identity = 43/93 (46.24%), Postives = 59/93 (63.44%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPP-CCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            A+TC  VT +L PC+ +LK  G  PPP  CC+GVR L  AA T  DR+ ACNC+K A    + +   VAA L  QCGV + Y+++P+ +C+ V
Sbjct:    1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSV 93          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.303e-17
Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 1
Query:  112 PVT--NAITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNV----AADLPRQCGVTIPYNITPSTDCSRV 399
            P+T   A+TCG V +++APCI ++  GG  P   CC+GV  LN  A TTPDRQ AC CL+ A    R + PN+    AA +P+ CGV++P+ I+ +T+C+ V
Sbjct:   20 PITANRALTCGTVNSNVAPCIGYITQGGTLPGA-CCTGVSKLNSMARTTPDRQQACRCLETA---ARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNV 117          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.904e-17
Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 1
Query:   82 LCFCAFWRLAPVTNAITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRVT 402
            L     +  +P  + I CG VT++LA C+ +L   G  P   CC GV+ L   A TTPDR+  C CLK A   I+G+  ++ A LP  CGV+IPY I+ ST+C  ++
Sbjct:   11 LIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSIS 116          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.904e-17
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            A+ CGQV + + PC+ +++ GG  P   CC+GVR L+  A ++ DRQ  CNCLK     I  +  N AA +P +C V +PY I+P  DCSR+
Sbjct:   26 ALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116          
The following BLAST results are available for this feature:
BLAST of EY757924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
NLTP3_VITSX9.026e-1948.35Non-specific lipid-transfer protein P3 OS=Vitis sp... [more]
NLTP8_HORVU2.626e-1846.74Non-specific lipid-transfer protein Cw18 OS=Hordeu... [more]
NLTP3_ORYSJ3.430e-1842.39Non-specific lipid-transfer protein 3 OS=Oryza sat... [more]
NLTP3_ORYSI3.430e-1842.39Non-specific lipid-transfer protein 3 OS=Oryza sat... [more]
NLTPD_BRAOT7.641e-1844.44Non-specific lipid-transfer protein D OS=Brassica ... [more]
NLTP_AMACA9.979e-1846.24Non-specific lipid-transfer protein OS=Amaranthus ... [more]
NLTP1_AMAHP9.979e-1846.24Non-specific lipid-transfer protein 1 OS=Amaranthu... [more]
NLTPA_BRAOT1.303e-1745.10Non-specific lipid-transfer protein A OS=Brassica ... [more]
NLTPC_ARATH2.904e-1741.12Non-specific lipid-transfer protein 12 OS=Arabidop... [more]
NLTP1_HORVU2.904e-1743.48Non-specific lipid-transfer protein 1 OS=Hordeum v... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-B06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757924 ID=EY757924; Name=EY757924; organism=Citrus sinensis; type=EST; length=858bp
CCACGCGTCCGTGATAACTAACTATAACCAAGCAAAAGCCTCCCTGAAGA
ATCCTCATGGCTGCTCTTAAGCTTGATTGTGCTTTGCTTTTGTGCATTCT
GGCGACTCGCCCCGGTGACTAATGCCATAACATGCGGACAGGTGACAACC
TCCTTGGCTCCATGCATCCCTTTCTTGAAAACTGGAGGGAGATTTCCTCC
ACCGCCATGCTGTAGCGGCGTCAGGCCTCTCAACGGCGCCGCCATAACCA
CCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACGGAACA
ATCCGCGGAATCAAACCTAATGTTGCCGCTGACCTTCCTAGACAATGTGG
AGTCACAATTCCTTACAATATCACCCCCAGCACCGACTGCTCTAGGGTCA
CGTGAACTTGACTTTGAGCTCTGAGACTTTCCAAGCATGATTGACTGATA
ACACTGATAATTAGACAATATCTATGCCAATTTCTTTGTCCGAACGAGTC
TCCACTTGCAAGAATGACACTCTCATGACATGCTTGTATAATCGCTTTCC
ATGACATATTAAATATGTACACGCGATCTGTGTTGTGAGTGATTACTCAC
AAAGATCCTGCTGGTTTCTCTTCTAAAATATTCAAATCCAACGAATCACG
AGTTGGCTTGGATCTTTTTCAAAAAAAAAAAAAAAAAAAAAAANNNANNA
NNNNNGNNGNNNNNNNNANNNNNNTTNTAANGGNNNNNNNTTGGGGCGGC
CGTCTAAAGGACCCAGTTTTACGACCGGGGAGGCGACGCAAACCTCTTCA
TAGGGGCCCTAAATCAATTCCGGGCCGCGTTTTAAACGCCGGCCGGGAAA
CCCTGGGT
back to top