EY757924

Overview
NameEY757924
Unique NameEY757924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.468e-17
Identity = 43/92 (46.74%), Postives = 53/92 (57.61%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            AI C QV   LA C+P+LK GG  P P CC+G+  L  AA    DRQ ACNCLK    TI GI  + A  LP +CGV I    + + DC+ +
Sbjct:   28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17
Identity = 50/109 (45.87%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   76 IVLCFCAFWRLAPVTNAITCGQVTTSLAPCIPFLKTGGRFPPPP-CCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            +VLC      LA    AI+  QV +SL PC+ +++     P PP  C G+R L  AA    DRQAAC C+K     I  I   VAA LP QC V IPY I+PS DC RV
Sbjct:   13 VVLCLLVDAPLAQ--GAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRV 119          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 1
Query:  112 PVTN--AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            P+T+  A++CG V+  +APCI +L   G  P   CC+GV  LN  A TTPDRQ AC CL  A  +   +    AA LP+ CGV IPY I+ ST+C+ V
Sbjct:   20 PITSNAALSCGTVSGYVAPCIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSV 116          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17
Identity = 38/92 (41.30%), Postives = 61/92 (66.30%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            AITC  VT +L PC+P+L++GG+ P P CC+G + L GA  T  DR+ AC C K A   ++ ++P++A+ LP +CG++    I P+ +C+ +
Sbjct:   26 AITCNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16
Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            A++CG V+ +LA CI +L   G  P   CCSGV  LN  A TTPDRQ AC CL  A   +  I    AA LP+ CGV IPY I+ +T+C+ V
Sbjct:   26 ALSCGTVSGNLAACIGYLTQNGPVPTA-CCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSV 116          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.458e-16
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1
Query:  127 ITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            + CGQV +SLA CIPFL  G   P   CC+GV+ L   A T+ DR+AAC C+K A      IK + A+ LP++CGV I   I+ +T+C  +
Sbjct:    1 VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.210e-16
Identity = 44/92 (47.83%), Postives = 56/92 (60.87%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            A++CG V+ +LA CI +L   G  P   CC+GV  LN  A TTPDRQ AC CL  A  +   +    AA LP+ CGV IPY I+ ST+C+ V
Sbjct:   26 ALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSV 116          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGG-RFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTI-RGIKPNVAADLPRQCGVTIPYN--ITPSTDCS 393
            A++CG+V ++L PC  +L  GG   P P CC+GVR LNG  +TT DR+ AC C+K A   +  G+  + AA +PR+CG+ IPY+  I  +T C+
Sbjct:   26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16
Identity = 44/92 (47.83%), Postives = 55/92 (59.78%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            A++CG V+ +LA CI +L   G  P   CC+GV  LN  A TTPDRQ AC CL  A      +    AA LP+ CGV IPY I+ ST+C+ V
Sbjct:   26 ALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSV 116          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.718e-15
Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = 1
Query:   76 IVLCFCAFWRLAPVTNAITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVT-IPYNITPSTDCSRV 399
            +V+     W   PV  AI+C QV +++ PC  +L      P   CC  +R L+     TPDRQA CNCLK       G+K   AA+LP  C VT +   I+P+ DCS+V
Sbjct:   15 LVVTMMNVWGAVPVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLK-TQAKSYGVKLGKAANLPGLCKVTDLNVPISPNVDCSKV 122          
The following BLAST results are available for this feature:
BLAST of EY757924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
NLTPB_ARATH6.468e-1746.74Non-specific lipid-transfer protein 11 OS=Arabidop... [more]
NLTP6_GOSHI8.448e-1745.87Non-specific lipid-transfer protein 6 OS=Gossypium... [more]
NLTP2_BRANA8.448e-1746.94Non-specific lipid-transfer protein 2 OS=Brassica ... [more]
NLTP1_HELAN8.448e-1741.30Non-specific lipid-transfer protein AP10 OS=Helian... [more]
NLTP3_BRANA1.103e-1648.91Non-specific lipid-transfer protein 3 OS=Brassica ... [more]
NLTPA_RICCO2.458e-1645.05Non-specific lipid-transfer protein A OS=Ricinus c... [more]
NLTPB_BRAOT3.210e-1647.83Non-specific lipid-transfer protein B OS=Brassica ... [more]
NLTP7_ARATH4.193e-1644.68Non-specific lipid-transfer protein 7 OS=Arabidops... [more]
NLTP1_BRANA4.193e-1647.83Non-specific lipid-transfer protein 1 OS=Brassica ... [more]
NLTP_PINTA2.718e-1539.45Non-specific lipid-transfer protein OS=Pinus taeda... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-B06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757924 ID=EY757924; Name=EY757924; organism=Citrus sinensis; type=EST; length=858bp
CCACGCGTCCGTGATAACTAACTATAACCAAGCAAAAGCCTCCCTGAAGA
ATCCTCATGGCTGCTCTTAAGCTTGATTGTGCTTTGCTTTTGTGCATTCT
GGCGACTCGCCCCGGTGACTAATGCCATAACATGCGGACAGGTGACAACC
TCCTTGGCTCCATGCATCCCTTTCTTGAAAACTGGAGGGAGATTTCCTCC
ACCGCCATGCTGTAGCGGCGTCAGGCCTCTCAACGGCGCCGCCATAACCA
CCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACGGAACA
ATCCGCGGAATCAAACCTAATGTTGCCGCTGACCTTCCTAGACAATGTGG
AGTCACAATTCCTTACAATATCACCCCCAGCACCGACTGCTCTAGGGTCA
CGTGAACTTGACTTTGAGCTCTGAGACTTTCCAAGCATGATTGACTGATA
ACACTGATAATTAGACAATATCTATGCCAATTTCTTTGTCCGAACGAGTC
TCCACTTGCAAGAATGACACTCTCATGACATGCTTGTATAATCGCTTTCC
ATGACATATTAAATATGTACACGCGATCTGTGTTGTGAGTGATTACTCAC
AAAGATCCTGCTGGTTTCTCTTCTAAAATATTCAAATCCAACGAATCACG
AGTTGGCTTGGATCTTTTTCAAAAAAAAAAAAAAAAAAAAAAANNNANNA
NNNNNGNNGNNNNNNNNANNNNNNTTNTAANGGNNNNNNNTTGGGGCGGC
CGTCTAAAGGACCCAGTTTTACGACCGGGGAGGCGACGCAAACCTCTTCA
TAGGGGCCCTAAATCAATTCCGGGCCGCGTTTTAAACGCCGGCCGGGAAA
CCCTGGGT
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