EY757924

Overview
NameEY757924
Unique NameEY757924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.054e-15
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 1
Query:  121 NAITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            +AI+C  V   L PC+ +L +G   PP  CC GV+ L  A  T+ D++AAC C+K    ++  +KP +A  L   CG ++P + +P+ DC+ V
Sbjct:   24 SAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSVT-VKPELAQALASNCGASLPVDASPTVDCTTV 115          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.054e-15
Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            AI CG V + + PC+ +++ GG  P   CC GV+ L+  A +  DRQ+ACNCLK     I  +  + A  +P +CGV +PY I+ + DCSRV
Sbjct:   23 AIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.742e-14
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 1
Query:   76 IVLCFCAFWRLAPVTNAITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNV---AADLPRQCGVTIPYNITPSTDCSRV 399
            ++L  C    L     A++C  V   L PC+ ++  GG  P   CC+G+  L   A T+ DRQ  C C+K A G +  + P     A +LP +CGV +PY  +PSTDC  +
Sbjct:    4 LLLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLT-LSPRTIQNALELPSKCGVDLPYKFSPSTDCDSI 112          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13
Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTI--RGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            AI+C  V  +L PC+ ++  GG  P   CC+G+R L+  A +  D+Q  C C+K   G +    I    AA LP +CGV +PY I PST+C+ +
Sbjct:   23 AISCNAVQANLYPCVVYVVQGGAIPYS-CCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSI 115          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.339e-13
Identity = 45/99 (45.45%), Postives = 57/99 (57.58%), Query Frame = 1
Query:  112 PVT-NAI-TCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIR-GIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            P+T NA+ +CG V  +LA CI +L  G       CC+GV  L   A TTPDRQ AC CL+ A   +  G+    AA LP  C V IPY I+ ST+C+ V
Sbjct:   20 PITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTV 117          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 45/95 (47.37%), Postives = 55/95 (57.89%), Query Frame = 1
Query:  124 AITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLK---RAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            AI+CG VT SL  C  +L  GG F P  CCSGV+ LN  A TT DRQ AC C++   RA G+   +    AA LP  C V I Y I+  T+C+ V
Sbjct:   26 AISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGS--RLNAGRAARLPGACRVRISYPISARTNCNTV 117          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.649e-12
Identity = 34/91 (37.36%), Postives = 50/91 (54.95%), Query Frame = 1
Query:  127 ITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPYNITPSTDCSRV 399
            + CGQV  +L+ C+PFL      P   CC+GV  L   A T  D++ AC C+K A      I+ + A+ LP +CGV I   I+ +T+C  +
Sbjct:    1 VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLT21_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12
Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 1
Query:  109 APVTNAITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGV--TIPYNITPSTDCSRV 399
            AP      CG+V   + PC+ F+K   + P   CCSG + L+    TT  ++ AC C+ RA   I GIK  + A++P++C +  T+P  IT   DCS++
Sbjct:   27 APAPGEEACGKVVQDIMPCLHFVKGEEKEPSKECCSGTKKLSEEVKTTEQKREACKCIVRATKGISGIKNELVAEVPKKCDIKTTLP-PITADFDCSKI 124          
BLAST of EY757924 vs. ExPASy Swiss-Prot
Match: NLT22_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 1
Query:  109 APVTNAITCGQVTTSLAPCIPFLKTGGRFPPPPCCSGVRPLNGAAITTPDRQAACNCLKRAYGTIRGIKPNVAADLPRQCGVTIPY-NITPSTDCSRV 399
            AP      CG+V   + PC+ F+K   + P   CCSG + L+    TT  ++ AC C+  A   I GIK  + A++P++CG+T     IT   DCS++
Sbjct:   27 APAPGEGPCGKVVHHIMPCLKFVKGEEKEPSKSCCSGTKKLSEEVKTTEQKREACKCIVAATKGISGIKNELVAEVPKKCGITTTLPPITADFDCSKI 124          
The following BLAST results are available for this feature:
BLAST of EY757924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
NLTP8_ARATH6.054e-1537.63Non-specific lipid-transfer protein 8 OS=Arabidops... [more]
NLTP1_WHEAT6.054e-1542.39Non-specific lipid-transfer protein (Fragment) OS=... [more]
NLTP6_ARATH8.742e-1436.04Non-specific lipid-transfer protein 6 OS=Arabidops... [more]
NLTPA_ARATH1.491e-1339.36Non-specific lipid-transfer protein 10 OS=Arabidop... [more]
NLTP2_ARATH4.339e-1345.45Non-specific lipid-transfer protein 2 OS=Arabidops... [more]
NLTP5_ARATH9.666e-1347.37Non-specific lipid-transfer protein 5 OS=Arabidops... [more]
NLTPB_RICCO1.649e-1237.36Non-specific lipid-transfer protein B OS=Ricinus c... [more]
NLT21_PARJU2.812e-1236.36Probable non-specific lipid-transfer protein 2 OS=... [more]
NLT22_PARJU3.673e-1235.71Probable non-specific lipid-transfer protein 2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-029-B06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757924 ID=EY757924; Name=EY757924; organism=Citrus sinensis; type=EST; length=858bp
CCACGCGTCCGTGATAACTAACTATAACCAAGCAAAAGCCTCCCTGAAGA
ATCCTCATGGCTGCTCTTAAGCTTGATTGTGCTTTGCTTTTGTGCATTCT
GGCGACTCGCCCCGGTGACTAATGCCATAACATGCGGACAGGTGACAACC
TCCTTGGCTCCATGCATCCCTTTCTTGAAAACTGGAGGGAGATTTCCTCC
ACCGCCATGCTGTAGCGGCGTCAGGCCTCTCAACGGCGCCGCCATAACCA
CCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACGGAACA
ATCCGCGGAATCAAACCTAATGTTGCCGCTGACCTTCCTAGACAATGTGG
AGTCACAATTCCTTACAATATCACCCCCAGCACCGACTGCTCTAGGGTCA
CGTGAACTTGACTTTGAGCTCTGAGACTTTCCAAGCATGATTGACTGATA
ACACTGATAATTAGACAATATCTATGCCAATTTCTTTGTCCGAACGAGTC
TCCACTTGCAAGAATGACACTCTCATGACATGCTTGTATAATCGCTTTCC
ATGACATATTAAATATGTACACGCGATCTGTGTTGTGAGTGATTACTCAC
AAAGATCCTGCTGGTTTCTCTTCTAAAATATTCAAATCCAACGAATCACG
AGTTGGCTTGGATCTTTTTCAAAAAAAAAAAAAAAAAAAAAAANNNANNA
NNNNNGNNGNNNNNNNNANNNNNNTTNTAANGGNNNNNNNTTGGGGCGGC
CGTCTAAAGGACCCAGTTTTACGACCGGGGAGGCGACGCAAACCTCTTCA
TAGGGGCCCTAAATCAATTCCGGGCCGCGTTTTAAACGCCGGCCGGGAAA
CCCTGGGT
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