EY757764

Overview
NameEY757764
Unique NameEY757764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757764 vs. ExPASy Swiss-Prot
Match: PLDA2_ORYSJ (Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica GN=PLD2 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 7.239e-22
Identity = 46/73 (63.01%), Postives = 61/73 (83.56%), Query Frame = 2
Query:   14 ECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 232
            ECV++VN++A++YWDLY+S+ L  DLPGHLL YP+ V+ EG VTELPG +FFPDT+A V+GTK + +PP LTT
Sbjct:  746 ECVQRVNKMADKYWDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQAPVIGTKGN-LPPFLTT 817          
BLAST of EY757764 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.392e-19
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 2
Query:    8 SGECVKKVNQIAERYWDLYSSESLEH--DLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 232
            S EC++ VN  A+  W LYS++      DLPGHLL YPI +   G+VT L GTEFFPDT A+V+G KS+Y+PP+LT+
Sbjct:  744 SEECIRMVNATADELWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPDTNAKVVGEKSNYLPPILTS 820          
BLAST of EY757764 vs. ExPASy Swiss-Prot
Match: PLDE1_ARATH (Phospholipase D epsilon OS=Arabidopsis thaliana GN=PLDEPSILON PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.749e-11
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 2
Query:   14 ECVKKVNQIAERYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGTEFFPDTKARVLGTKSDYMPPVLTT 232
            ECV+ +  I E+ W++YS + +   L  HL+ YPI V+G+G V E+ G   FPDTK  V G +S   PPVLTT
Sbjct:  691 ECVRGLRTIGEQMWEIYSGDKVVDMLGIHLVAYPISVTGDGAVEEV-GDGCFPDTKTLVKGKRSKMFPPVLTT 762          
The following BLAST results are available for this feature:
BLAST of EY757764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PLDA2_ORYSJ7.239e-2263.01Phospholipase D alpha 2 OS=Oryza sativa subsp. jap... [more]
PLDZ1_ARATH4.392e-1954.55Phospholipase D zeta OS=Arabidopsis thaliana GN=PL... [more]
PLDE1_ARATH5.749e-1146.58Phospholipase D epsilon OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-027-C03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757764 ID=EY757764; Name=EY757764; organism=Citrus sinensis; type=EST; length=577bp
CCACGCGTCCGGCGAATGTGTTAAGAAGGTTAACCAGATTGCCGAACGGT
ATTGGGACCTGTACTCCAGTGAGTCTCTTGAGCATGACTTGCCCGGTCAC
TTGCTCCGCTACCCTATTGGTGTTTCTGGTGAAGGAGATGTCACGGAGTT
GCCAGGAACTGAGTTCTTCCCCGACACCAAGGCTCGTGTTCTCGGTACCA
AATCAGATTATATGCCCCCAGTCCTGACCACCTGATGCTCTCCAGAGGGT
GCCAAAAATAATTTCGTAGTTGCGAACTACCGGTTATGGTAGTATAGCAA
ATAATAAATGATGTGTATTAAAACCAACAGGTGTGGTATTGTTTTTCTGC
TTTGGTTCAGAGATGTGGTGTGATTTGGTGATATACTGACGGGAAACTTA
TTAAGTCTGTTTATTTGTGCATTACGTTTAAATTGGTCCTAAATTTTGCT
TCTGTTAATCTCTATATTACTAGCTTTTCATAAACATAACGATGATCTCA
ATTTGTTATCAGTTAGCATTTCTGAGATTACTTAAAGAGACATTTTCAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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