EY757725

Overview
NameEY757725
Unique NameEY757725
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757725 vs. ExPASy Swiss-Prot
Match: GALE_MYCGE (UDP-glucose 4-epimerase OS=Mycoplasma genitalium GN=galE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.139e-19
Identity = 76/245 (31.02%), Postives = 120/245 (48.98%), Query Frame = 2
Query:   14 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMAR-HGVDTLIYSSTCATYGEPEKMPITEE---TPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII-AGLK-----VKGTDYSTADGTCVRDYIDVNDLVDAHV---KALERAQPKKVGIYNVGTGKGRSVKEFVEACKKA-TSANIKVIYEPRRPGDYAEVYSDPTKIR 706
            V HFAA   V ES  +PLKY+      TL ++ +++       L ++S+ A YG+     I+EE   T     NPYG +K + E I+   +KNS + V+ LR+FNV G+             +   G  +G        ++ A LK     + G DY+T DG+C+RDYI V D+ +AH    K L   +  K   +N+G+G G S  E ++  KK    + + +   P+R  D A + ++  K +
Sbjct:   79 VFHFAAKTSVSESVHNPLKYFDCNVIGTLNLISAISNLQKPIKLFFASSAAVYGQTTNSYISEEIVITETQATNPYGLSKFLDELILNAVAKNSQLQVVCLRFFNVAGA-------------ILPFGNFNGNTTLLIPNLVKAFLKQTPFFLYGNDYATKDGSCIRDYIHVYDICNAHFLLWKWLNDHRQIKFETFNLGSGIGTSNLEVIDIAKKVFYPSRLNLEIRPKRSWDPAILVANVAKAK 310          
BLAST of EY757725 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.837e-17
Identity = 69/239 (28.87%), Postives = 107/239 (44.77%), Query Frame = 2
Query:   14 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTC-ATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGS--DPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNW 721
            V+H AA   V  S  +P+         T+ +LE M ++ +D ++++S+  A YGEP  +P+ E  P  P++PYG +K + E+ I  +++   +   ILRY NV G   DP+G  G                        I  +    +     DG   RD++ V D+  A++ AL      K  I N+GTGK  SV E  +  K       + IY+  R G+   +Y D  K    L W
Sbjct:   68 VIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENHPINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQDPKGEAG-------------------VISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANLMALNW----KNEIVNIGTGKETSVNELFDIIKHEIGFRGEAIYDKPREGEVYRIYLDIKKAE-SLGW 282          
BLAST of EY757725 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.365e-14
Identity = 61/248 (24.60%), Postives = 114/248 (45.97%), Query Frame = 2
Query:   14 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITE-ETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTANTLISQKLR 754
            ++H  A A V  S  +P  Y  +    TL + E   R  ++ ++Y+S+ + YG   K+P +E +    PI+ Y   K+  E +   +     + ++ LR+F V G                E+GR   A F  A+ I+ G +++  +Y    G   RD+  ++D+VD  ++A+++    +  I+N+G  K   +  F+E  +K  +   K  + P + GD    Y+D +K    L +     I + L+
Sbjct:   85 IVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDIEKVVYASSSSVYGGNRKIPFSEDDRVDKPISLYASTKRSNELMAHVYHHLYGIKMIGLRFFTVYG----------------EYGRPDMAYFKFAKNILLGKEIEVYNY----GNMERDFTYISDVVDGILRAIKKDFDYE--IFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGLK 310          
BLAST of EY757725 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.109e-11
Identity = 72/269 (26.77%), Postives = 117/269 (43.49%), Query Frame = 2
Query:   14 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHG-VDTLIYSSTCATYGEPEKMPIT---EETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVG-IYNVGTGKGRSVKEFV-EACK---KATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTANTLISQKLRNRLE-MAEVSSWW 790
            +MHFAA  +V  S  +  ++  N    T V+LE+    G +   I+ ST   YGE ++  +    E +   P NPY   K  AE +++ + ++  + V+  R  NV G            P       I      A RG +  L + G      DG+ VR Y+   D+ +A    L + +   VG +YN+GT K R V +   + CK       ANIK +    RP +    + D  K++ +L W+  T   + L+  ++   +   WW
Sbjct:   84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG------------PNQFPEKLIPKFILLAMRGQV--LPIHG------DGSNVRSYLYCEDVAEAFEVVLHKGE---VGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFV--DNRPFNDQRYFLDDQKLK-KLGWSERTTWEEGLKKTMDWYTQNPEWW 326          
BLAST of EY757725 vs. ExPASy Swiss-Prot
Match: VIPB_SALTI (Vi polysaccharide biosynthesis protein vipB/tviC OS=Salmonella typhi GN=vipB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 64/260 (24.62%), Postives = 110/260 (42.31%), Query Frame = 2
Query:   14 VMHFAAVAYVGESTLDPLKYYHNITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG--SDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAH-VKALERAQPKKVGIYNVGTGKGRSVKEFVEACK------KATSANIKVIYEPRRPGDYAEVYSDPTKIRLELNWTANTLISQKLRNRLE 766
            V+H AA+  V  S  DP+          L +L +     V +  Y+++ +TYG+   +P  EE    P++PY   K + E     F+++ +   + LRYFNV G   +P G                        R I++ LK +   Y   DG+  RD+  + +++ A+ + A       K  +YNV  G   S+ E     +      +   +  + IY+  R GD     +D TKI+  L++     I + L+  L+
Sbjct:   94 VLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAV-----------------IPRWILSLLKDEPI-YINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLK 335          
The following BLAST results are available for this feature:
BLAST of EY757725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
GALE_MYCGE3.139e-1931.02UDP-glucose 4-epimerase OS=Mycoplasma genitalium G... [more]
GALE_METJA3.837e-1728.87Putative UDP-glucose 4-epimerase OS=Methanocaldoco... [more]
Y1055_METJA1.365e-1424.60Uncharacterized protein MJ1055 OS=Methanocaldococc... [more]
RHM1_ARATH4.109e-1126.77Probable rhamnose biosynthetic enzyme 1 OS=Arabido... [more]
VIPB_SALTI7.008e-1124.62Vi polysaccharide biosynthesis protein vipB/tviC O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-026-G08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757725 ID=EY757725; Name=EY757725; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCTGTAATGCATTTTGCAGCTGTTGCTTATGTTGGAGAAA
GCACCCTTGATCCTCTCAAATATTATCACAACATTACGTCAAATACCTTG
GTAGTATTGGAGTCAATGGCCAGACATGGCGTGGATACTTTGATATATTC
CAGTACATGCGCAACATACGGAGAGCCTGAAAAGATGCCCATTACTGAAG
AAACTCCACAGGCTCCAATTAATCCATATGGTAAAGCTAAGAAGATGGCA
GAAGATATCATCCTGGACTTCTCTAAAAATTCAGACATGGCAGTTATGAT
CCTACGGTACTTCAATGTCATCGGTTCTGATCCAGAGGGTAGATTAGGTG
AAGCTCCCAGACCTGAATTGCGTGAGCATGGGCGAATATCAGGTGCATGT
TTTGATGCAGCTCGTGGTATTATTGCTGGGCTGAAGGTCAAAGGAACAGA
CTACAGTACAGCAGATGGAACTTGTGTTCGTGATTATATTGACGTCAATG
ATCTGGTTGATGCTCATGTCAAAGCTCTTGAGAGGGCACAACCTAAGAAA
GTTGGAATCTATAATGTTGGCACGGGAAAAGGGAGATCGGTAAAGGAGTT
TGTTGAGGCATGTAAAAAAGCAACATCGGCAAATATCAAAGTTATATATG
AACCTCGCCGCCCAGGTGACTATGCTGAAGTGTATAGTGACCCGACCAAG
ATCAGGCTTGAACTGAACTGGACTGCTAATACACTAATCTCCCAGAAGCT
TAGAAATCGCTTGGAGATGGCAGAAGTCTCATCGTGGTGGGTATGCATCG
ATCATATAGGGAACTTATTTATAGCCATTAATTGTATAGAAACGGNAGCA
GGCCCCCCGCAGCACAG
back to top