EY757646

Overview
NameEY757646
Unique NameEY757646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_MYCSJ (Elongation factor G OS=Mycobacterium sp. (strain JLS) GN=fusA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 51/153 (33.33%), Postives = 76/153 (49.67%), Query Frame = 1
Query:  235 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSIV 693
            S+  G Q   + G L   P+ NVK  ++D   A   +            +V   A   A P ++EP+  VE+ TP D +  +   L+ RRG + A   + G  A +VKA +P+ E FG+  DLR  TQG+A    VFD +A VP + + K I+
Sbjct:  548 SVDAGAQDAMQYGVLAGYPLVNVKVTLLDG--AYHEVDSSEMAFKVAGSQVLKKAAQAAQPVILEPIMAVEVTTPEDYMGEVIGDLNSRRGQIQAMEERAG--ARVVKAQVPLSEMFGYVGDLRSKTQGRANYSMVFDSYAEVPAN-VSKEII 695          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_MYCPA (Elongation factor G OS=Mycobacterium paratuberculosis GN=fusA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 50/153 (32.68%), Postives = 77/153 (50.33%), Query Frame = 1
Query:  235 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSIV 693
            S+  G Q   + G L   P+ N+K  ++D           + +I     +V   A   A P ++EP+  VE+ TP D +  +   L+ RRG + A   + G  A +VKA +P+ E FG+  DLR  TQG+A    VFD +A VP + + K I+
Sbjct:  548 SVDAGAQDAMQYGVLAGYPLVNLKVTLLDGAFHEVDSSEMAFKI--AGSQVLKKAAAQAQPVILEPIMAVEVTTPEDYMGDVIGDLNSRRGQIQAMEERSG--ARVVKAHVPLSEMFGYVGDLRSKTQGRANYSMVFDSYAEVPAN-VSKEII 695          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_MYCA1 (Elongation factor G OS=Mycobacterium avium (strain 104) GN=fusA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 50/153 (32.68%), Postives = 77/153 (50.33%), Query Frame = 1
Query:  235 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSIV 693
            S+  G Q   + G L   P+ N+K  ++D           + +I     +V   A   A P ++EP+  VE+ TP D +  +   L+ RRG + A   + G  A +VKA +P+ E FG+  DLR  TQG+A    VFD +A VP + + K I+
Sbjct:  548 SVDAGAQDAMQYGVLAGYPLVNLKVTLLDGAFHEVDSSEMAFKI--AGSQVLKKAAAQAQPVILEPIMAVEVTTPEDYMGDVIGDLNSRRGQIQAMEERSG--ARVVKAHVPLSEMFGYVGDLRSKTQGRANYSMVFDSYAEVPAN-VSKEII 695          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_KINRD (Elongation factor G OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=fusA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 47/152 (30.92%), Postives = 74/152 (48.68%), Query Frame = 1
Query:  235 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSI 690
            S+  G Q   +EG +   P+  +K  ++D   A   +           + V   A   A P L+EPV  VE++TP D +  +   L+ RRG + +     G  A +VKA +P+ E FG+  DLR  TQG+A     F ++A VP +  D+ +
Sbjct:  547 SVDNGIQEAMQEGVVAGYPLVGIKASLIDG--AAHDVDSSEMAFKIAGKMVLREAVRKAQPVLLEPVMAVEVRTPADYMGDVIGDLNSRRGQIESMEDVSG--AKLVKASVPLSEMFGYVGDLRSKTQGRAVYSMQFSNYAEVPRNVADEIV 694          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_THETH (Elongation factor G OS=Thermus thermophilus GN=fusA PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 42/152 (27.63%), Postives = 73/152 (48.03%), Query Frame = 1
Query:  235 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSI 690
            ++ +G +   + GPL   P+ ++K  + D           + +I          A     P ++EP+  VE+ TP + +  +   L+ RRG +    P+    A +++AF+P+ E FG+ TDLR  TQG+   +  FDH+  VP    +K I
Sbjct:  541 AVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKI--AGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGN--AQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLI 688          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_THET8 (Elongation factor G OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=fusA PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 42/152 (27.63%), Postives = 73/152 (48.03%), Query Frame = 1
Query:  235 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSI 690
            ++ +G +   + GPL   P+ ++K  + D           + +I          A     P ++EP+  VE+ TP + +  +   L+ RRG +    P+    A +++AF+P+ E FG+ TDLR  TQG+   +  FDH+  VP    +K I
Sbjct:  541 AVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKI--AGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGN--AQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLI 688          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_THET2 (Elongation factor G OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=fusA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 42/152 (27.63%), Postives = 73/152 (48.03%), Query Frame = 1
Query:  235 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSI 690
            ++ +G +   + GPL   P+ ++K  + D           + +I          A     P ++EP+  VE+ TP + +  +   L+ RRG +    P+    A +++AF+P+ E FG+ TDLR  TQG+   +  FDH+  VP    +K I
Sbjct:  541 AVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKI--AGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGN--AQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLI 688          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_CLOBM (Elongation factor G OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=fusA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 51/179 (28.49%), Postives = 82/179 (45.81%), Query Frame = 1
Query:  184 DTLPTEVDKSLLNAVKDSIV---------QGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAY-SAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSI 690
            + +PTE +    NA+    +          G Q  ++ G +   P+ N K K+VD           S      A  +A+ +A   A   L+EP   VE+  P + +  +   ++ RRG +    P+ G  A +++AF+P+ E FG+ T LR  TQG+   +  FDH+  VP    DK I
Sbjct:  512 EMMPTEGEYEFDNAIVGGAIPKEYIPAIDNGIQEASQSGIIAGYPVINFKVKLVDGSYHDVD---SSEMAFKIAGSMAFKNAMSKADAVLLEPSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAG--AEVIRAFVPLSEMFGYATTLRSKTQGRGNYVMQFDHYEEVPKSIQDKVI 685          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_CLOBJ (Elongation factor G OS=Clostridium botulinum (strain Kyoto / Type A2) GN=fusA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 51/179 (28.49%), Postives = 82/179 (45.81%), Query Frame = 1
Query:  184 DTLPTEVDKSLLNAVKDSIV---------QGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAY-SAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSI 690
            + +PTE +    NA+    +          G Q  ++ G +   P+ N K K+VD           S      A  +A+ +A   A   L+EP   VE+  P + +  +   ++ RRG +    P+ G  A +++AF+P+ E FG+ T LR  TQG+   +  FDH+  VP    DK I
Sbjct:  512 EMMPTEGEYEFDNAIVGGAIPKEYIPAIDNGIQEASQSGIIAGYPVINFKVKLVDGSYHDVD---SSEMAFKIAGSMAFKNAMSKADAVLLEPSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAG--AEVIRAFVPLSEMFGYATTLRSKTQGRGNYVMQFDHYEEVPKSIQDKVI 685          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_MYCVP (Elongation factor G OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=fusA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 50/153 (32.68%), Postives = 77/153 (50.33%), Query Frame = 1
Query:  235 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSIV 693
            S+  G Q   + G L   P+ NVK  ++D           + ++     +V   A   A P ++EP+  VE+ TP D +  +   L+ RRG + A   + G  A +VKA +P+ E FG+  DLR  TQG+A    VFD +A VP + + K I+
Sbjct:  547 SVDAGAQDAMQYGVLAGYPLVNVKVTLLDGAFHEVDSSEMAFKV--AGSQVLKKAAQSAQPVILEPIMAVEVTTPEDYMGDVIGDLNSRRGQIQAMEERSG--ARVVKAQVPLSEMFGYVGDLRSKTQGRANYSMVFDSYAEVPAN-VSKEII 694          
The following BLAST results are available for this feature:
BLAST of EY757646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
EFG_MYCSJ3.728e-1133.33Elongation factor G OS=Mycobacterium sp. (strain J... [more]
EFG_MYCPA3.728e-1132.68Elongation factor G OS=Mycobacterium paratuberculo... [more]
EFG_MYCA13.728e-1132.68Elongation factor G OS=Mycobacterium avium (strain... [more]
EFG_KINRD3.728e-1130.92Elongation factor G OS=Kineococcus radiotolerans (... [more]
EFG_THETH4.869e-1127.63Elongation factor G OS=Thermus thermophilus GN=fus... [more]
EFG_THET84.869e-1127.63Elongation factor G OS=Thermus thermophilus (strai... [more]
EFG_THET24.869e-1127.63Elongation factor G OS=Thermus thermophilus (strai... [more]
EFG_CLOBM4.869e-1128.49Elongation factor G OS=Clostridium botulinum (stra... [more]
EFG_CLOBJ4.869e-1128.49Elongation factor G OS=Clostridium botulinum (stra... [more]
EFG_MYCVP6.359e-1132.68Elongation factor G OS=Mycobacterium vanbaalenii (... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-025-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757646 ID=EY757646; Name=EY757646; organism=Citrus sinensis; type=EST; length=694bp
CCACGCGTCCGACCATTGGTGACAGGACTTGCCGAGGATATTGAGAACGG
CGTTGTAAGTATTGATTGGAGTCGGAAGACGCTTGGTGATTTCTTTAAAA
CAAAATATGACTGGGATTTACTTGCAGCACGATCTATATGGGCATTTGGA
CCTGATAAGCAGGGACCTAATATTTTATTAGATGACACACTCCCAACGGA
AGTTGACAAGAGCTTGCTGAATGCTGTTAAGGATTCCATTGTTCAAGGCT
TTCAGTGGGGTGCTCGAGAAGGACCCCTCTGTGATGAACCTATCAGAAAT
GTCAAGTTTAAAATAGTCGATGCAAGGATTGCACCTGAACCGCTGCATCG
AGGATCTGGTCAGATCATTCCCACAGCTCGACGTGTGGCTTATTCAGCTT
TTCTTATGGCTACCCCTCGGCTTATGGAACCGGTGTATTATGTTGAGATA
CAAACTCCAATTGATTGTGTCTCTGCAATCTACACGGTGTTATCTAGAAG
GCGTGGACATGTTACTGCCGATGTTCCTCAACCAGGAACTCCAGCTTATA
TTGTTAAGGCATTTCTACCAGTGATTGAGAGTTTTGGTTTTGAGACGGAC
TTGAGGTACCATACTCAAGGGCAAGCATTTTCCCTTTCAGTCTTTGATCA
TTGGGCTATAGTTCCTGGAGATCCCCTTGACAAGAGCATAGTTC
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