EY757646

Overview
NameEY757646
Unique NameEY757646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: ETUD1_HUMAN (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Homo sapiens GN=EFTUD1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16
Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 1
Query:  355 SGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDP 675
            SGQ+I T +     A  +   RLM  +Y  +I    D +  +Y VLS+R G V  +  + GT  +I+KA LPV ESFGF  ++R  T G A    VF HW I+P DP
Sbjct:  958 SGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDP 1064          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16
Identity = 54/153 (35.29%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  169 NILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 627
            N+ LD+T   +     LN V D +V GF     EGPL  EP+  V  ++VDA+I  + +HRG  QI P  R   + A + + P L EP   V I  P + + ++   +++RRG +  D+ Q G    I+    PV E FGF   +R  T G+A
Sbjct:  542 NMFLDNTKGLQY----LNEVMDLLVDGFHQAMDEGPLAREPVMKVIVRLVDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVVINVPYEYMGSVSREMNQRRGQL-IDMRQEGEVMIIISE-APVAEMFGFAGAIRGATSGRA 688          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16
Identity = 52/153 (33.99%), Postives = 80/153 (52.29%), Query Frame = 1
Query:  169 NILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 627
            N+ +D+T   +     LN V D ++ GF     EGPL  EP+  V  +++DA++  + +HRG  QI P  R   + A + + P L EP   V I  P + + A+   +++RRG +  D+ Q G    I+ A  PV E FGF   +R  T G+A
Sbjct:  542 NMFIDNTKGVQY----LNEVMDLLIDGFHQAMDEGPLAREPVMKVIVRLLDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQL-VDMKQEGEVMTII-AEAPVAEMFGFAGSIRSATSGRA 688          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_PYRKO (Elongation factor 2 OS=Pyrococcus kodakaraensis GN=fusA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16
Identity = 56/153 (36.60%), Postives = 78/153 (50.98%), Query Frame = 1
Query:  169 NILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 627
            N+ LD+T   +     LN V D +V GF     EGPL  EP+  V  ++ DA+I  + +HRG  QI P  R   + A + A P L EP   V I  P + + A+   L++RRG +  D+ Q G    I+    PV E FGF   +R  T G+A
Sbjct:  542 NMFLDNTKGIQY----LNEVMDLLVDGFHQAMDEGPLAKEPVMKVIVRLHDAKIHEDNVHRGPAQIYPAIRSAIHCAMMKAGPVLYEPYQKVIINVPYEYMGAVSRELNQRRGQL-IDMRQEG-EVMIIIGEAPVAEMFGFAGAIRGATSGKA 688          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_THEGJ (Elongation factor 2 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fusA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 56/158 (35.44%), Postives = 78/158 (49.37%), Query Frame = 1
Query:  154 DKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 627
            D    N+  D+T   +     LN V D +V GF     EGPL  EP+  V  ++ DA+I  + +HRG  QI P  R   + A + A P L EP   V I  P + + A+   L++RRG +  D+ Q G    I+    PV E FGF   +R  T G+A
Sbjct:  537 DVYNGNMFFDNTKGIQY----LNEVMDLLVDGFHMAMDEGPLAKEPVMKVIVRLHDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSRELNQRRGQL-IDMRQEG-EVMIIIGEAPVAEMFGFAGAIRGATSGKA 688          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15
Identity = 52/150 (34.67%), Postives = 75/150 (50.00%), Query Frame = 1
Query:  217 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVP 666
            L+  ++ I++GF+   + GPL  E  + VK K++DA    + +HRG  Q+IP  R     A   A   L+EP+  V I TP D +      LS RRG +  D+ Q G     +K+  PV E FGF   +R  TQG+      F  +  VP
Sbjct:  560 LDEARELIIEGFKEAVKNGPLAAEKCQGVKVKLMDAVFHEDAIHRGPAQLIPAVRTGVRDAIAQANVGLLEPIQNVYISTPQDYMGDAMKELSNRRGQI-LDMEQEGDMT-TIKSKAPVSEMFGFAGAIRGATQGRCLWSIEFGGFEKVP 707          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_DESAP (Elongation factor G OS=Desulforudis audaxviator (strain MP104C) GN=fusA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14
Identity = 55/174 (31.61%), Postives = 86/174 (49.43%), Query Frame = 1
Query:  169 NILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSI 690
            N ++   +P E   ++   V++++  G  +G         P+ +VK  +VD    P      + +I   A      A   A+P L+EP+  VE+  P D V  + + L+ RRGH+T    Q  T   IV+A +P+ E FG+ T+LR  TQG+      FDH+A VP +  DK I
Sbjct:  525 NQIVGGVVPKEFIPAVETGVREALTSGVLFGY--------PVADVKVSLVDGSYHPVDSSEVAFKI--AASMAVKKAVANASPVLLEPIMRVEVVLPEDYVGDVISDLNSRRGHITQMEHQGKTQ--IVRADVPLAEMFGYATELRSRTQGRGNHTMQFDHYAEVPQNIADKMI 686          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_THEVO (Elongation factor 2 OS=Thermoplasma volcanium GN=fusA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13
Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 1
Query:  160 QGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQ 624
            +G NI+ D T   +     L+   + +++ F      GPL +E +  VK ++VDA++  + +HRG  Q+IP  R   Y A   A   L+EPV  V I  P + + +    + +RRG V  D+ Q G    +V A +PV   FGF + +R  T G+
Sbjct:  540 EGTNIMFDVTRGIQY----LDETMELLIEAFTEVMNRGPLANEKVFGVKARLVDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAKRILLEPVQKVFINVPQEEMGSAINEVQQRRG-VIEDMTQEGEEVSLV-ARIPVSGMFGFASAIRSATGGK 688          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EF2_PICTO (Elongation factor 2 OS=Picrophilus torridus GN=fusA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  163 GPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQ 624
            G N++LD T   +     L+   + +++ F     +GPL +E +  +K  ++DA++  + +HRG  Q+IP  R   Y A   A   L+EP+  V I  P + + ++   L +RRG V  D+ Q G    I+ A +PV    GF + +R  T G+
Sbjct:  541 GTNVMLDMTKGIQY----LDETMELLIESFNEAMDKGPLANEKVYGLKVSLMDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAGRVLLEPMQKVFISVPQEIMGSVTNELQQRRG-VVEDMQQNGEEITII-AKVPVAGMIGFASAIRSATGGK 688          
BLAST of EY757646 vs. ExPASy Swiss-Prot
Match: EFG_PORGI (Elongation factor G OS=Porphyromonas gingivalis GN=fusA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 1
Query:  235 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVP 666
            SI +GFQ   + G L   P+  +K  ++D    P    + S +I   A +   +A   A P LMEP+  +E+ TP + +  +   L++RRG V   +    T A IVKA +P+ E FG+ T LR  T G+A S   F H++ VP
Sbjct:  548 SIQKGFQRAMKNGVLAGYPLDQLKVTVIDGSFHPVDSDQLSFEIC--ALQAFKNACEKAHPTLMEPIMKLEVVTPEESMGDVIGDLNKRRGQVEG-MESSRTGARIVKAKVPLAEMFGYVTALRTITSGRATSTMTFSHYSEVP 688          
The following BLAST results are available for this feature:
BLAST of EY757646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
ETUD1_HUMAN1.013e-1641.12Elongation factor Tu GTP-binding domain-containing... [more]
EF2_THESM1.013e-1635.29Elongation factor 2 OS=Thermococcus sibiricus (str... [more]
EF2_PYRHO1.013e-1633.99Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]
EF2_PYRKO2.257e-1636.60Elongation factor 2 OS=Pyrococcus kodakaraensis GN... [more]
EF2_THEGJ5.027e-1635.44Elongation factor 2 OS=Thermococcus gammatolerans ... [more]
EF2_META31.463e-1534.67Elongation factor 2 OS=Methanococcus aeolicus (str... [more]
EFG_DESAP2.758e-1431.61Elongation factor G OS=Desulforudis audaxviator (s... [more]
EF2_THEVO1.048e-1332.26Elongation factor 2 OS=Thermoplasma volcanium GN=f... [more]
EF2_PICTO2.335e-1330.52Elongation factor 2 OS=Picrophilus torridus GN=fus... [more]
EFG_PORGI6.794e-1334.72Elongation factor G OS=Porphyromonas gingivalis GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-025-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757646 ID=EY757646; Name=EY757646; organism=Citrus sinensis; type=EST; length=694bp
CCACGCGTCCGACCATTGGTGACAGGACTTGCCGAGGATATTGAGAACGG
CGTTGTAAGTATTGATTGGAGTCGGAAGACGCTTGGTGATTTCTTTAAAA
CAAAATATGACTGGGATTTACTTGCAGCACGATCTATATGGGCATTTGGA
CCTGATAAGCAGGGACCTAATATTTTATTAGATGACACACTCCCAACGGA
AGTTGACAAGAGCTTGCTGAATGCTGTTAAGGATTCCATTGTTCAAGGCT
TTCAGTGGGGTGCTCGAGAAGGACCCCTCTGTGATGAACCTATCAGAAAT
GTCAAGTTTAAAATAGTCGATGCAAGGATTGCACCTGAACCGCTGCATCG
AGGATCTGGTCAGATCATTCCCACAGCTCGACGTGTGGCTTATTCAGCTT
TTCTTATGGCTACCCCTCGGCTTATGGAACCGGTGTATTATGTTGAGATA
CAAACTCCAATTGATTGTGTCTCTGCAATCTACACGGTGTTATCTAGAAG
GCGTGGACATGTTACTGCCGATGTTCCTCAACCAGGAACTCCAGCTTATA
TTGTTAAGGCATTTCTACCAGTGATTGAGAGTTTTGGTTTTGAGACGGAC
TTGAGGTACCATACTCAAGGGCAAGCATTTTCCCTTTCAGTCTTTGATCA
TTGGGCTATAGTTCCTGGAGATCCCCTTGACAAGAGCATAGTTC
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