EY757536

Overview
NameEY757536
Unique NameEY757536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 57/169 (33.73%), Postives = 76/169 (44.97%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKR 517
            E AK   P++IFIDEIDA+  +R     +TT        +E   TL QLL E+DGFD    V  +AATN              FDR I +  P+ +GR EILK+H  K+ +  +VDLS  A    G +G                     +   D   AVD++    KR
Sbjct:  225 EMAKEKAPTIIFIDEIDAIGAKRMD---ETT-----GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNLR-NVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVLGAEKR 384          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.229e-13
Identity = 46/131 (35.11%), Postives = 68/131 (51.91%), Query Frame = 2
Query:    5 ASERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            A E  + N+P+++FIDEIDA+A +R+           N   + R   ++QLL  +DG      ++ +AATN              FDR+I I  P+A GR EIL+IH   +K++D VDL   A    G+ G
Sbjct:  295 AFEECEKNQPAILFIDEIDAIAPKREKT---------NGEVERR--IVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVG 414          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.229e-13
Identity = 56/170 (32.94%), Postives = 81/170 (47.65%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKRR 520
            E AK   P++IFIDEIDA+  +R     +TT        +E   TL QLL E+DGFD    V  +AATN              FDR I +  P+ +GR EILK+H  ++K+   VDL + A+   G +G                +    +   D   AVD++ +G +R+
Sbjct:  227 ELAKEKAPTIIFIDEIDAIGAKRMD---ETT-----GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLK-GVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKV-LGNERK 386          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 2
Query:    5 ASERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            A E A+ N P++IFIDE+DA+A +R+    +    +           ++QLL  +DG      VI +AATN              FDR++ I  P++ GR EIL+IH   +K+SD VDL   A    G  G
Sbjct:  289 AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI-----------VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVG 408          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 2
Query:    5 ASERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            A E A+ N P++IFIDE+DA+A +R+    +    +           ++QLL  +DG      VI +AATN              FDR++ I  P++ GR EIL+IH   +K+SD VDL   A    G  G
Sbjct:  289 AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI-----------VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVG 408          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 2
Query:    5 ASERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            A E A+ N P++IFIDE+DA+A +R+    +    +           ++QLL  +DG      VI +AATN              FDR++ I  P+A GR EIL+IH   +K++D VDL   A    G  G
Sbjct:  289 AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI-----------VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVG 408          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 2
Query:    5 ASERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            A E A+ N P++IFIDE+DA+A +R+    +    +           ++QLL  +DG      VI +AATN              FDR++ I  P+A GR EIL+IH   +K++D VDL   A    G  G
Sbjct:  289 AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI-----------VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVG 408          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 2
Query:    5 ASERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            A E A+ N P++IFIDE+DA+A +R+    +    +           ++QLL  +DG      VI +AATN              FDR++ I  P+A GR EIL+IH   +K++D VDL   A    G  G
Sbjct:  289 AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI-----------VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVG 408          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 2
Query:    5 ASERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            A E A+ N P++IFIDE+DA+A +R+    +    +           ++QLL  +DG      VI +AATN              FDR++ I  P+A GR EIL+IH   +K++D VDL   A    G  G
Sbjct:  289 AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI-----------VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVG 408          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 2
Query:    5 ASERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            A E A+ N P++IFIDE+DA+A +R+    +    +           ++QLL  +DG      VI +AATN              FDR++ I  P+A GR EIL+IH   +K++D VDL   A    G  G
Sbjct:  289 AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI-----------VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVG 408          
The following BLAST results are available for this feature:
BLAST of EY757536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
PSMR_THEGJ9.411e-1433.73Proteasome-activating nucleotidase OS=Thermococcus... [more]
TERA1_CAEEL1.229e-1335.11Transitional endoplasmic reticulum ATPase homolog ... [more]
PSMR_PYRHO1.229e-1332.94Proteasome-activating nucleotidase OS=Pyrococcus h... [more]
TERA_XENTR1.605e-1335.11Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
TERA_XENLA1.605e-1335.11Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
TERA_RAT1.605e-1335.11Transitional endoplasmic reticulum ATPase OS=Rattu... [more]
TERA_PIG1.605e-1335.11Transitional endoplasmic reticulum ATPase OS=Sus s... [more]
TERA_MOUSE1.605e-1335.11Transitional endoplasmic reticulum ATPase OS=Mus m... [more]
TERA_HUMAN1.605e-1335.11Transitional endoplasmic reticulum ATPase OS=Homo ... [more]
TERA_DANRE1.605e-1335.11Transitional endoplasmic reticulum ATPase OS=Danio... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-024-E11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757536 ID=EY757536; Name=EY757536; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGAGAGAGCCAAGGTAAACAAACCATCTGTTATATTCATTG
ATGAAATTGATGCACTGGCTACTAGGCGTCAAGGAATTTTCAAGGATACT
ACGGACCACTTGTATAATGCTGCCACCCAAGAGAGGGAAACCACACTGAA
TCAACTCTTGATAGAACTTGATGGGTTTGATACTGGTAAAGGTGTTATAT
TCTTAGCTGCAACTAATCGGAGGGATTTGCTTGATCCTGCTCTTCTTAGA
CCTGGTCGGTTTGATCGAAAGATAAGAATTCGCGCTCCTAATGCAAAAGG
GAGAACAGAAATTCTGAAAATTCATGCAAGCAAAGTGAAGATGTCAGATT
CTGTTGATTTATCTTCATACGCCAAAAACTTACCCGGATGGACAGGGGCA
AGGTTGGCTCAGCTGGTCCAAGAGGCTGCTCTTGTGGCAGTTAGGAAAGG
GCATGAATCCATTCTTTCGTCAGACATGGATGATGCAGTTGACCGACTTA
CGGTGGGACCCAAACGTCGTGGTATAGAATTAGGTCATCAGGGACAGAGC
CGTAGAGCTGCTACCGAAGTTGGAGTTGCCATGATTTCTCATCTCCTCAG
ACGATATGAAAATGCAAAAGTTGAATGTTGTGATCGCATTTCTATTGTTC
CTCGTGGTCAGACATTATCACAATTAGTATTTCATCGGCTTGACGATGAA
TCATACATGTTTGAGCGGCGTCCACAATTGCTGCATCGCCTCANGNTTTT
ACTAGGAGGGANGGCTGCAGAGGAAGTCATTTATGGACAGGACACGTCCA
GAGCATCTGTTAACTACCTTGCTGATGCATCTTGGCTGGCTCGTAAAATT
TTACCATATGGAAATTNGAGAATCCATGGTCATACATGGAAACCACCTCA
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