EY757536

Overview
NameEY757536
Unique NameEY757536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 49/164 (29.88%), Postives = 68/164 (41.46%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLT 502
            E AK   PS+IFIDEIDA+   R             +  +E   TL QLL E+DGF     V  + ATN              FDR I I AP+ +GR  IL IH + + +   VD+   A    G  G                  HE +   D + ++++ +
Sbjct:  240 ELAKKKSPSIIFIDEIDAIGASRT--------ESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEKFS 395          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 46/127 (36.22%), Postives = 65/127 (51.18%), Query Frame = 2
Query:   17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            AK ++P +IF+DE+DA+  RR   F + T     +A +E + TL +LL ++DGFD       + ATN               DRK+ I  PN  GR EI KIH +KVK +   D  +  K   G+ G
Sbjct:  270 AKEHEPCIIFMDEVDAIGGRR---FSEGT-----SADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNG 388          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 2
Query:   17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPK 514
            A+ ++P +IF+DEIDA+  RR   F + T     +A +E + TL +LL ++DGFDT   V  + ATN               DRKI I  PN + R +ILKIHA  +     +D  +  K   G+ G                  H+ ++  D   AV ++    K
Sbjct:  222 ARDHQPCIIFMDEIDAIGGRR---FSEGT-----SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 2
Query:   17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPK 514
            A+ ++P +IF+DEIDA+  RR   F + T     +A +E + TL +LL ++DGFDT   V  + ATN               DRKI I  PN + R +ILKIHA  +     +D  +  K   G+ G                  H+ ++  D   AV ++    K
Sbjct:  222 ARDHQPCIIFMDEIDAIGGRR---FSEGT-----SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 2
Query:   17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPK 514
            A+ ++P +IF+DEIDA+  RR   F + T     +A +E + TL +LL ++DGFDT   V  + ATN               DRKI I  PN + R +ILKIHA  +     +D  +  K   G+ G                  H+ ++  D   AV ++    K
Sbjct:  222 ARDHQPCIIFMDEIDAIGGRR---FSEGT-----SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 2
Query:   17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPK 514
            A+ ++P +IF+DEIDA+  RR   F + T     +A +E + TL +LL ++DGFDT   V  + ATN               DRKI I  PN + R +ILKIHA  +     +D  +  K   G+ G                  H+ ++  D   AV ++    K
Sbjct:  222 ARDHQPCIIFMDEIDAIGGRR---FSEGT-----SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 2
Query:    5 ASERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            A E A+ N PS+IFIDEID++A +R+    +    +           ++QLL  +DG  +   VI + ATN              FDR+I I  P+  GR E+L+IH   +K+++ VDL   +K+  G+ G
Sbjct:  293 AFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRI-----------VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVG 412          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.671e-13
Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 2
Query:   14 RAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            +A+ + P +IF DEIDA+A +R          L +A T +    +NQLL ELDG +  K V+ +AATN               DR I +  P+ K R +I KIH   + +++ V+L   AK   G+TG
Sbjct:  540 KARQSAPCIIFFDEIDAIAPKRGR-------DLSSAVTDK---VVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTG 657          

HSP 2 Score: 70.0922 bits (170), Expect = 1.962e-11
Identity = 48/130 (36.92%), Postives = 65/130 (50.00%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTL-NQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397
            E A+ N PS+IFIDEIDA+A +R            + AT E E  L  QLL  +DG      V+ + ATN              FDR+I I  P+ +GR EIL+IH   + +++ VDL   A    G+ G
Sbjct:  266 EEAEENAPSIIFIDEIDAIAPKR------------DEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVG 383          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.671e-13
Identity = 54/169 (31.95%), Postives = 77/169 (45.56%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKR 517
            E AK   P++IFIDEIDA+  +R     +TT        +E   TL QLL E+DGFD    V  +AATN              FDR I +  P+ +GR EILK+H  ++K+   VDL   A+   G +G                +    +   D   A+D++    K+
Sbjct:  224 ELAKEKAPTIIFIDEIDAIGAKR---LDETT-----GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLR-GVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGNEKK 383          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.671e-13
Identity = 54/169 (31.95%), Postives = 75/169 (44.38%), Query Frame = 2
Query:   17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKRRG 523
            AK ++P VIF+DEIDA+  RR   F + T     +A +E + TL +LL ++DGFD       + ATN               DRKI I  PN  GR EILKIH  KV     +D  +  K   G  G                +  + ++ SD+  A  ++    K  G
Sbjct:  221 AKEHEPCVIFMDEIDAIGGRR---FSEGT-----SADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEG 381          
The following BLAST results are available for this feature:
BLAST of EY757536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
PSMR_METPE3.576e-1329.88Proteasome-activating nucleotidase OS=Methanosphae... [more]
PRS10_YEAST3.576e-1336.2226S protease subunit RPT4 OS=Saccharomyces cerevis... [more]
PRS10_SPETR3.576e-1330.7226S protease regulatory subunit S10B OS=Spermophil... [more]
PRS10_MOUSE3.576e-1330.7226S protease regulatory subunit S10B OS=Mus muscul... [more]
PRS10_HUMAN3.576e-1330.7226S protease regulatory subunit S10B OS=Homo sapie... [more]
PRS10_BOVIN3.576e-1330.7226S protease regulatory subunit S10B OS=Bos taurus... [more]
CD48D_ARATH3.576e-1333.59Cell division control protein 48 homolog D OS=Arab... [more]
Y1156_METJA4.671e-1335.16Cell division cycle protein 48 homolog MJ1156 OS=M... [more]
PSMR_PYRFU4.671e-1331.95Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
PRS10_SCHPO4.671e-1331.95Probable 26S protease subunit rpt4 OS=Schizosaccha... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-024-E11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757536 ID=EY757536; Name=EY757536; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGAGAGAGCCAAGGTAAACAAACCATCTGTTATATTCATTG
ATGAAATTGATGCACTGGCTACTAGGCGTCAAGGAATTTTCAAGGATACT
ACGGACCACTTGTATAATGCTGCCACCCAAGAGAGGGAAACCACACTGAA
TCAACTCTTGATAGAACTTGATGGGTTTGATACTGGTAAAGGTGTTATAT
TCTTAGCTGCAACTAATCGGAGGGATTTGCTTGATCCTGCTCTTCTTAGA
CCTGGTCGGTTTGATCGAAAGATAAGAATTCGCGCTCCTAATGCAAAAGG
GAGAACAGAAATTCTGAAAATTCATGCAAGCAAAGTGAAGATGTCAGATT
CTGTTGATTTATCTTCATACGCCAAAAACTTACCCGGATGGACAGGGGCA
AGGTTGGCTCAGCTGGTCCAAGAGGCTGCTCTTGTGGCAGTTAGGAAAGG
GCATGAATCCATTCTTTCGTCAGACATGGATGATGCAGTTGACCGACTTA
CGGTGGGACCCAAACGTCGTGGTATAGAATTAGGTCATCAGGGACAGAGC
CGTAGAGCTGCTACCGAAGTTGGAGTTGCCATGATTTCTCATCTCCTCAG
ACGATATGAAAATGCAAAAGTTGAATGTTGTGATCGCATTTCTATTGTTC
CTCGTGGTCAGACATTATCACAATTAGTATTTCATCGGCTTGACGATGAA
TCATACATGTTTGAGCGGCGTCCACAATTGCTGCATCGCCTCANGNTTTT
ACTAGGAGGGANGGCTGCAGAGGAAGTCATTTATGGACAGGACACGTCCA
GAGCATCTGTTAACTACCTTGCTGATGCATCTTGGCTGGCTCGTAAAATT
TTACCATATGGAAATTNGAGAATCCATGGTCATACATGGAAACCACCTCA
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