EY757536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11 Identity = 40/122 (32.79%), Postives = 62/122 (50.82%), Query Frame = 2 Query: 32 PSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397 PS++FIDEIDA+ T+R ++ +E + T+ +LL +LDGFD+ V + ATN DRKI P+ K R I +IH SK+ +S+ V+L + ++G Sbjct: 282 PSIVFIDEIDAVGTKRYDA--------HSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSG 395
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11 Identity = 42/120 (35.00%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAK 376 AK PS+IFIDE+DA+ T+R K A +E + T+ +LL +LDGF V +AATN DRKI PN + R I++IH+ K+ +S V+ A+ Sbjct: 259 AKEKAPSIIFIDELDAIGTKRFDSEK--------AGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 370
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11 Identity = 44/127 (34.65%), Postives = 60/127 (47.24%), Query Frame = 2 Query: 17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397 AK P++IFIDEIDA+ R + +E + TL QLL +DGF+T V + ATN FDR I I P+ +GR ILK+H + M ++V+L A G G Sbjct: 267 AKKKAPTIIFIDEIDAVGASRT--------EANTSGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNG 385
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11 Identity = 44/161 (27.33%), Postives = 70/161 (43.48%), Query Frame = 2 Query: 17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRL 499 AK P++IFIDE+DA+ T+R K + +E + T+ +LL +LDGF + V LAATN DRKI P+ R +IL+IH+ K+ D ++ A++ + G G S+ D + + + Sbjct: 270 AKEKAPTIIFIDELDAIGTKRFDSEK--------SGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEV 422
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11 Identity = 41/127 (32.28%), Postives = 64/127 (50.39%), Query Frame = 2 Query: 17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397 AK P++IFIDE+DA+ T+R F + +E + T+ +LL +LDGF + + +AATN DRKI PN + R IL+IH+ K+ +S V+ A++ + G Sbjct: 257 AKEKGPTIIFIDELDAIGTKR---FDSEV-----SGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNG 375
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11 Identity = 45/136 (33.09%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGF-------DTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397 E A+ P+ IFIDEID++ +RR T + A+ + + +LL+++DG D K V+ LAATN +++I I P+AKGR E+L+I +++++D VDL+S A+N+ G++G Sbjct: 295 EMARFYSPATIFIDEIDSICSRRG------TSEEHEASRRVKA----ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRR--LEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSG 418
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens GN=KATNA1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11 Identity = 45/136 (33.09%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGF-------DTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397 E A+ P+ IFIDEID++ +RR T + A+ + + +LL+++DG D K V+ LAATN +++I I P+AKGR E+L+I +++++D VDL+S A+N+ G++G Sbjct: 295 EMARFYSPATIFIDEIDSICSRRG------TSEEHEASRRVKA----ELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRR--LEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSG 418
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: CDAT_PLAF7 (Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0047 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11 Identity = 41/129 (31.78%), Postives = 61/129 (47.29%), Query Frame = 2 Query: 11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTG 397 ++A P +IFIDEID++A +R + + + ++QLL +DG V+ LAATN FDR+I I P+ +GR EIL K+K+ V+L AK G+ G Sbjct: 614 KKASEKTPCIIFIDEIDSIANKRS-----------KSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVG 731 The following BLAST results are available for this feature:
BLAST of EY757536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >EY757536 ID=EY757536; Name=EY757536; organism=Citrus sinensis; type=EST; length=900bpback to top |