EY757536

Overview
NameEY757536
Unique NameEY757536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17
Identity = 74/267 (27.72%), Postives = 118/267 (44.19%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSS--YAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKRRGIELGHQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQXXXXXXXXXGGXAAEEVIYGQDTSRA 805
            + A+   P +++IDEIDA+  +R      TT  +   +  E E TLNQLL+E+DG  T   VI LA+TN               DR + I  P  + R EI + H   +K++ S    S   A+  PG++G                +GH S+ + + + AV+R+  G  ++   L  + Q   A  E G A++  +L        E   ++SI PR  T + L F ++         + Q         GG A+E + + + TS A
Sbjct:  395 KEARARAPCIVYIDEIDAVGKKRS-----TT--MSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEH-----TEAVMKVSITPR--TNAALGFAQMLPRDQHLFTKEQLFERMCMALGGRASEALSFNEVTSGA 647          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17
Identity = 77/270 (28.52%), Postives = 116/270 (42.96%), Query Frame = 2
Query:   14 RAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKM-----SDSVDLSSYAKNL-PGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKRRGIELGHQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQXXXXXXXXXGGXAAEEVIYGQDTSRA 805
            +A+   PS+IFIDEIDA+   R              A  ERE TLNQLL+E+DGF T   V+ LA TN              FDR I+I +P+  GR +I  +H  ++ +      D  +LS     L PG+TG                     I     + A++R+  G +++   L  + +   A  E G A+    L +Y +  +    ++SI+PRGQ       +   D+  + E   Q         GG  +EE+ +   TS A
Sbjct:  375 QARSMAPSIIFIDEIDAIGKERG------KGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFL-KYADPLL----KVSIIPRGQGALGYAQYLPPDQYLISEE--QFRHRMIMALGGRVSEELHFPSVTSGA 631          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.082e-17
Identity = 58/163 (35.58%), Postives = 81/163 (49.69%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRL 499
            E AK   PS+IFIDEIDA+A +R    K +T     +  +E + TL QLL ELDGF++   V  +AATN              FDR I +  PN  GR EILKIH S + +++ VD+   A+   G +G                   + +  +D  DAVD++
Sbjct:  238 ELAKEKSPSIIFIDEIDAVAAKR---LKSST-----SGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKI 392          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.094e-17
Identity = 57/173 (32.95%), Postives = 85/173 (49.13%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKRRGIE 529
            E AK   PS+IFIDEIDA+  +R  I          +  +E + TL QLL ELDGFD    V  +AATN              FDR I +  P+ KGRTEI  I+  K+K+ D+++L   ++   G++G                 G   +  +D+ +A++++ V  KR  +E
Sbjct:  221 EMAKRKAPSIIFIDEIDAIGAKRIDIG--------TSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINV--KRNKME 383          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.094e-17
Identity = 60/174 (34.48%), Postives = 81/174 (46.55%), Query Frame = 2
Query:   17 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKRRGIELGH 538
            AK   PS+IFIDEIDA+A +R       TD L     +E + TL QLL E+DGFD    V  + ATN              FDR I + AP+ KGR EILKIH  K+ +++ V+L   AK   G  G                +  + +   D   AV+++    K +  E  H
Sbjct:  259 AKEKAPSIIFIDEIDAIAAKR-------TDAL-TGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVKVKEPAH 424          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.646e-16
Identity = 56/163 (34.36%), Postives = 78/163 (47.85%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRL 499
            E A+   PS+IFIDEIDA+  RR    +D T     +  +E + TL QLL E+DGFD    +  +AATN              FDR I+I  P+ +GR EI KIH   + +++ VDL   AK   G +G                +  + +   D   AVDR+
Sbjct:  266 ELAREKAPSIIFIDEIDAIGARRM---RDAT-----SGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRV 420          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.513e-16
Identity = 56/173 (32.37%), Postives = 83/173 (47.98%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKRRGIE 529
            E AK   PS+IFIDEIDA+  +R  I          +  +E + TL QLL ELDGF+    V  +AATN              FDR I +  P+ +GRTEI  I+  K+K+ D+++L   ++   G++G                 G   +   D+ DA+ ++ V  KR  +E
Sbjct:  221 EMAKRKAPSIIFIDEIDAIGAKRIDIG--------TSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINV--KRNNME 383          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.513e-16
Identity = 56/173 (32.37%), Postives = 83/173 (47.98%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKRRGIE 529
            E AK   PS+IFIDEIDA+  +R  I          +  +E + TL QLL ELDGF+    V  +AATN              FDR I +  P+ +GRTEI  I+  K+K+ D+++L   ++   G++G                 G   +   D+ DA+ ++ V  KR  +E
Sbjct:  221 EMAKRKAPSIIFIDEIDAIGAKRIDIG--------TSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINV--KRNNME 383          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.513e-16
Identity = 56/173 (32.37%), Postives = 83/173 (47.98%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKRRGIE 529
            E AK   PS+IFIDEIDA+  +R  I          +  +E + TL QLL ELDGF+    V  +AATN              FDR I +  P+ +GRTEI  I+  K+K+ D+++L   ++   G++G                 G   +   D+ DA+ ++ V  KR  +E
Sbjct:  221 EMAKRKAPSIIFIDEIDAIGAKRIDIG--------TSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINV--KRNNME 383          
BLAST of EY757536 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.513e-16
Identity = 56/173 (32.37%), Postives = 83/173 (47.98%), Query Frame = 2
Query:   11 ERAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNXXXXXXXXXXXXXXFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGXXXXXXXXXXXXXXXXKGHESILSSDMDDAVDRLTVGPKRRGIE 529
            E AK   PS+IFIDEIDA+  +R  I          +  +E + TL QLL ELDGF+    V  +AATN              FDR I +  P+ +GRTEI  I+  K+K+ D+++L   ++   G++G                 G   +   D+ DA+ ++ V  KR  +E
Sbjct:  221 EMAKRKAPSIIFIDEIDAIGAKRIDIG--------TSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINV--KRNNME 383          
The following BLAST results are available for this feature:
BLAST of EY757536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
SPG7_HUMAN1.074e-1727.72Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2[more]
AFG3_YEAST1.074e-1728.52Mitochondrial respiratory chain complexes assembly... [more]
PSMR_METTH4.082e-1735.58Proteasome-activating nucleotidase OS=Methanobacte... [more]
PSMR_SULSO9.094e-1732.95Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PSMR_METJA9.094e-1734.48Proteasome-activating nucleotidase OS=Methanocaldo... [more]
PSMR_METKA2.646e-1634.36Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PSMR_SULIY4.513e-1632.37Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIM4.513e-1632.37Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIL4.513e-1632.37Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIK4.513e-1632.37Proteasome-activating nucleotidase OS=Sulfolobus i... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-024-E11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757536 ID=EY757536; Name=EY757536; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGAGAGAGCCAAGGTAAACAAACCATCTGTTATATTCATTG
ATGAAATTGATGCACTGGCTACTAGGCGTCAAGGAATTTTCAAGGATACT
ACGGACCACTTGTATAATGCTGCCACCCAAGAGAGGGAAACCACACTGAA
TCAACTCTTGATAGAACTTGATGGGTTTGATACTGGTAAAGGTGTTATAT
TCTTAGCTGCAACTAATCGGAGGGATTTGCTTGATCCTGCTCTTCTTAGA
CCTGGTCGGTTTGATCGAAAGATAAGAATTCGCGCTCCTAATGCAAAAGG
GAGAACAGAAATTCTGAAAATTCATGCAAGCAAAGTGAAGATGTCAGATT
CTGTTGATTTATCTTCATACGCCAAAAACTTACCCGGATGGACAGGGGCA
AGGTTGGCTCAGCTGGTCCAAGAGGCTGCTCTTGTGGCAGTTAGGAAAGG
GCATGAATCCATTCTTTCGTCAGACATGGATGATGCAGTTGACCGACTTA
CGGTGGGACCCAAACGTCGTGGTATAGAATTAGGTCATCAGGGACAGAGC
CGTAGAGCTGCTACCGAAGTTGGAGTTGCCATGATTTCTCATCTCCTCAG
ACGATATGAAAATGCAAAAGTTGAATGTTGTGATCGCATTTCTATTGTTC
CTCGTGGTCAGACATTATCACAATTAGTATTTCATCGGCTTGACGATGAA
TCATACATGTTTGAGCGGCGTCCACAATTGCTGCATCGCCTCANGNTTTT
ACTAGGAGGGANGGCTGCAGAGGAAGTCATTTATGGACAGGACACGTCCA
GAGCATCTGTTAACTACCTTGCTGATGCATCTTGGCTGGCTCGTAAAATT
TTACCATATGGAAATTNGAGAATCCATGGTCATACATGGAAACCACCTCA
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