EY757528

Overview
NameEY757528
Unique NameEY757528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_HALS3 (Translation initiation factor 2 subunit beta OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eIF2B PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 47/136 (34.56%), Postives = 64/136 (47.06%), Query Frame = 1
Query:   76 EYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSV 483
            +Y+E L R      +  P++ G   R  +  P V +EG   TV+ NF      + R  DHV+ FL  E+GTS S+D   R  + G F  +     L  YV  YV C  C  PDT L  +     L CE CG+  +V
Sbjct:    2 DYEEQLDRAM----DEKPDVTGSETRFEVPDPNVRKEGNV-TVYENFQATLDALSRTQDHVLKFLQNEVGTSASIDESGRARLTGEFGQRRVSDTLDAYVETYVTCPECGLPDTNLETDGDTIQLHCEACGARSTV 132          
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_THEVO (Translation initiation factor 2 subunit beta OS=Thermoplasma volcanium GN=eif2b PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14
Identity = 44/139 (31.65%), Postives = 75/139 (53.96%), Query Frame = 1
Query:   79 YDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIK 495
            YD+LL +  ++L  +   +     R  +  P+++REG K T+  NF D+   ++R PD V+ FL  ELGT+   +G+ RL++  +   +  +  +  Y+N YV C  C S DT + K  R+  L C+ CG+   +  +K
Sbjct:    5 YDKLLEKAKDVLSSSTKNID----RLKIPEPEIIREG-KATIIRNFQDIIDIINRDPDQVIKFLTRELGTNIVQNGR-RLIINKKVTLEELQEKMNEYINTYVRCYECGSLDTEIQKSGRVSLLVCKACGAQHPIHTVK 137          
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_THEAC (Translation initiation factor 2 subunit beta OS=Thermoplasma acidophilum GN=eif2b PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14
Identity = 41/140 (29.29%), Postives = 75/140 (53.57%), Query Frame = 1
Query:   76 EYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIK 495
            +Y++LL +  N+L  +   +     R  +  P+++REG K T+  NF D+   ++R P+H++ FL  E GT+   +G+ RL++  +   +     +  Y+N YV C  C S DT + K  R+  L C+ CG+   +  ++
Sbjct:    4 DYEKLLEKAKNVLSSSTKNID----RLKIPDPEIIREG-KATIIRNFQDIVDIINRDPEHIIKFLTREFGTNIVQNGR-RLIINRKLTLEELLDKMNEYINTYVRCYECGSLDTEIQKSGRISLLVCKACGAQHPIHSVR 137          
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_METS5 (Translation initiation factor 2 subunit beta OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eif2b PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13
Identity = 43/144 (29.86%), Postives = 76/144 (52.78%), Query Frame = 1
Query:   61 SDRDYEYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPI 492
            S+RD  Y  LL R++  L +   +LA +   T   P   +      T+  NF + C  + R+    M +LL EL  +GS+    +L+++G+F+       + R++  YV C  CKS DT+L K+ ++++++C  CG+   V P+
Sbjct:    2 SERDKLYHVLLDRLYAKLPKK--DLASE---TQTLPTLSIINVGNTTIIRNFSEYCDRIRREDKICMRYLLKELAAAGSISENGQLMIQGKFSNAIVNTFMDRFLKTYVQCSTCKSLDTVLVKDKKIWYIQCLACGAKNPVKPL 140          
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_PYRAE (Translation initiation factor 2 subunit beta OS=Pyrobaculum aerophilum GN=eif2b PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13
Identity = 44/141 (31.21%), Postives = 67/141 (47.52%), Query Frame = 1
Query:   70 DYEYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPI 492
            D EY  LL R + ++       A   +R    P   +    +KT+  NF  + K ++R    +  F   EL   G+L+G     + G  +PK  E +  R++  YV+C  C S DT L KE R+F +RC  CG+   V P+
Sbjct:    2 DSEYAALLERAYKLV-------APKAQRRAEIPKIEVENMPRKTIIPNFGQIAKRLNRDVYFMAKFFQKELAVPGTLEGDV-FTLHGEKSPKVVEAVYDRFIRYYVVCPVCNSIDTELRKEGRIFIMRCLACGASTPVRPL 134          
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_STAMF (Translation initiation factor 2 subunit beta OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eif2b PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12
Identity = 40/135 (29.63%), Postives = 73/135 (54.07%), Query Frame = 1
Query:   67 RDYEYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGS 471
            RDY+++ELL R ++ L    P     +    +   +V+  G K T+ +NF  +   ++R P  +  + + ELG    ++   +L+++GRF+      ++  +V +YVIC  C S  T L K+ ++F L+CE CG+
Sbjct:    6 RDYKFEELLERAYSKL----PARTVSKETFEVPRAEVMFVGGK-TLILNFKQITDVINRDPKILQRYFVKELGVPAYMNESGQLILQGRFSSHVINRLIDLFVKKYVICPTCGSRFTKLIKKGKVFILKCEACGA 135          
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_THENV (Translation initiation factor 2 subunit beta OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=eIF2B PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12
Identity = 42/141 (29.79%), Postives = 68/141 (48.23%), Query Frame = 1
Query:   70 DYEYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPI 492
            D EY  LL R + ++       A   +R    P   ++   +KTV  NF  + K ++R    +  F   EL   G+++G     + G  +PK  E +  R++  YV+C  C S DT L +E R++ +RC  CG+   V P+
Sbjct:    2 DEEYIALLDRAYKLV-------APKAQRRAEIPKIEVQNMPRKTVIPNFGQIAKRLNRDIYFMAKFFQRELAVPGTVEGDV-FTLHGEKSPKVVEAVYERFIRYYVVCPVCNSIDTELRREGRIYVMRCLACGASTPVKPL 134          
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_SULAC (Translation initiation factor 2 subunit beta OS=Sulfolobus acidocaldarius GN=eif2b PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12
Identity = 38/134 (28.36%), Postives = 73/134 (54.48%), Query Frame = 1
Query:   70 DYEYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGS 471
            D  Y++LL R+++ L +   + +G +      P  ++ +    T+  NF + C  + R+    M +LL EL   GSL    +LV++G+F+ +    ++ R++  YV C  C+S DTIL ++ +++ + C  CG+
Sbjct:    6 DKNYEQLLDRLYDRLPDK-AQKSGQQNL----PNLIVLQVGNTTIIRNFSEYCDRIRREDKLCMRYLLKELAAPGSLGENGQLVIQGKFSSQVVTMLMERFLKMYVQCSTCRSFDTILKRDKKVWIISCLACGA 134          
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_PYRIL (Translation initiation factor 2 subunit beta OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=eIF2B PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11
Identity = 40/141 (28.37%), Postives = 68/141 (48.23%), Query Frame = 1
Query:   70 DYEYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPI 492
            D EY  LL R + ++       A   +R    P   ++   +KT+  NF  + K ++R    +  F   EL   G+++G     + G  +PK  E +  R++  YV+C  C S DT L +E R++ ++C  CG+   V P+
Sbjct:    2 DEEYLALLERAYKLV-------APKAQRRAEIPKIEVQNMPRKTIIPNFGQIAKRLNRDVYFMAKFFQKELAVPGTIEGDV-FTLHGEKSPKVVEAVYERFIRYYVVCPVCNSIDTELKREGRIYVMKCLACGASTPVRPL 134          
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_PYRAR (Translation initiation factor 2 subunit beta OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=eIF2B PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11
Identity = 44/141 (31.21%), Postives = 69/141 (48.94%), Query Frame = 1
Query:   70 DYEYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPI 492
            D EY  LL R + ++          +RRT +   QV     +KT+  NF  + K ++R    +  F   EL   G+++G     + G  +PK  E +  R++  YV+C  C S DT L KE R+F ++C  CG+   V P+
Sbjct:    2 DKEYLALLERAYTLVAPKA------QRRTEIPKIQV-ENMPRKTIIPNFGAIAKRLNRDIYFMAKFFQKELAVPGTVEGDV-FTLHGEKSPKVVEAVYERFIRYYVVCPVCNSIDTELRKEGRVFVMKCLACGASTPVKPL 134          
The following BLAST results are available for this feature:
BLAST of EY757528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
IF2B_HALS31.238e-1434.56Translation initiation factor 2 subunit beta OS=Ha... [more]
IF2B_THEVO2.112e-1431.65Translation initiation factor 2 subunit beta OS=Th... [more]
IF2B_THEAC4.705e-1429.29Translation initiation factor 2 subunit beta OS=Th... [more]
IF2B_METS53.050e-1329.86Translation initiation factor 2 subunit beta OS=Me... [more]
IF2B_PYRAE8.874e-1331.21Translation initiation factor 2 subunit beta OS=Py... [more]
IF2B_STAMF4.404e-1229.63Translation initiation factor 2 subunit beta OS=St... [more]
IF2B_THENV5.752e-1229.79Translation initiation factor 2 subunit beta OS=Th... [more]
IF2B_SULAC5.752e-1228.36Translation initiation factor 2 subunit beta OS=Su... [more]
IF2B_PYRIL1.281e-1128.37Translation initiation factor 2 subunit beta OS=Py... [more]
IF2B_PYRAR1.281e-1131.21Translation initiation factor 2 subunit beta OS=Py... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-024-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757528 ID=EY757528; Name=EY757528; organism=Citrus sinensis; type=EST; length=693bp
CCACGCGTCCGTGAAGCTGATTGACGTGGTGGTCCACGGCAGCGTTATCC
ATGGGAAGGGAGTGATCGCGACTATGAATATGACGAGCTTCTTGGTAGGG
TCTTTAACATCCTCCGAGAGAATAATCCTGAACTTGCAGGAGATAGGCGT
AGAACAGTCATGAGACCTCCACAAGTTCTTCGTGAAGGAACGAAGAAAAC
TGTTTTTGTCAATTTCATGGATCTCTGCAAGACCATGCATCGGCAGCCAG
ATCATGTCATGACATTTTTGCTTGCTGAACTGGGGACAAGTGGGTCACTG
GACGGACAGCAAAGACTGGTCGTGAAGGGCCGATTTGCTCCCAAGAATTT
TGAAGGGATACTGCGTCGATATGTCAATGAATATGTCATCTGTCTTGGGT
GCAAAAGTCCTGACACGATACTTTCAAAGGAAAACCGCCTCTTCTTTCTC
AGATGTGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCTATCAAAGCTGG
TTTCCAGGCACGTGTTGGTCGTAGAAATGCTGGAATGTGATCTTGTTGTC
CTGCTTTTCTCCAGCATTTTGAAAAAAAGCTGTTTGTTTTCATTTTTACC
TTATGCGTTTTACTACTATTTGGTTTTGACTAATTGTANTTATCTAGCCG
GGAAAATATTGATATGGATGAGCCTTTATAAAAAAAAAAAAAA
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