EY757528

Overview
NameEY757528
Unique NameEY757528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_PYRCJ (Translation initiation factor 2 subunit beta OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=eIF2B PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 42/141 (29.79%), Postives = 66/141 (46.81%), Query Frame = 1
Query:   70 DYEYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPI 492
            D EY  LL R + ++       A   +  V+  P       +KT+  NF  + K ++R    +  F   EL   G+++G     + G  +PK  E +  R++  YV+C  C S DT L +E R+F L C  CG+   V P+
Sbjct:    2 DDEYLALLDRAYKLVSPKAQRRAEIPKIEVVNMP-------RKTIIQNFGAIAKRLNRDVYLMAKFFQKELAVPGTVEGDV-FTLHGEKSPKVVEAVYERFIKYYVVCPVCNSIDTELRREGRIFVLHCLACGASTPVRPL 134          
BLAST of EY757528 vs. ExPASy Swiss-Prot
Match: IF2B_AERPE (Translation initiation factor 2 subunit beta OS=Aeropyrum pernix GN=eif2b PE=3 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 43/147 (29.25%), Postives = 79/147 (53.74%), Query Frame = 1
Query:   55 EGSDRDYEYDELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQ-RLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPI 492
            E +++  +YD LL +++  +    P  +G     +  P Q++R G++ TV  NF ++ + + R P  V  +L  EL T+ S + +  +L++  + + K     L+ ++  YV C  C S DT L ++ R + L+CE CG+ + V PI
Sbjct:    8 EEAEKLMDYDYLLEKLYKKV----PPKSGTSEYRIPEP-QIIRIGSQ-TVIRNFREIAQALKRDPKLVARYLQKELATAASYEEESGQLILNVKVSRKVVNQFLQLFMKTYVRCPTCGSIDTKLLRQERAYMLKCEACGAEQPVKPI 148          
The following BLAST results are available for this feature:
BLAST of EY757528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
IF2B_PYRCJ3.728e-1129.79Translation initiation factor 2 subunit beta OS=Py... [more]
IF2B_AERPE4.869e-1129.25Translation initiation factor 2 subunit beta OS=Ae... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-024-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757528 ID=EY757528; Name=EY757528; organism=Citrus sinensis; type=EST; length=693bp
CCACGCGTCCGTGAAGCTGATTGACGTGGTGGTCCACGGCAGCGTTATCC
ATGGGAAGGGAGTGATCGCGACTATGAATATGACGAGCTTCTTGGTAGGG
TCTTTAACATCCTCCGAGAGAATAATCCTGAACTTGCAGGAGATAGGCGT
AGAACAGTCATGAGACCTCCACAAGTTCTTCGTGAAGGAACGAAGAAAAC
TGTTTTTGTCAATTTCATGGATCTCTGCAAGACCATGCATCGGCAGCCAG
ATCATGTCATGACATTTTTGCTTGCTGAACTGGGGACAAGTGGGTCACTG
GACGGACAGCAAAGACTGGTCGTGAAGGGCCGATTTGCTCCCAAGAATTT
TGAAGGGATACTGCGTCGATATGTCAATGAATATGTCATCTGTCTTGGGT
GCAAAAGTCCTGACACGATACTTTCAAAGGAAAACCGCCTCTTCTTTCTC
AGATGTGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCTATCAAAGCTGG
TTTCCAGGCACGTGTTGGTCGTAGAAATGCTGGAATGTGATCTTGTTGTC
CTGCTTTTCTCCAGCATTTTGAAAAAAAGCTGTTTGTTTTCATTTTTACC
TTATGCGTTTTACTACTATTTGGTTTTGACTAATTGTANTTATCTAGCCG
GGAAAATATTGATATGGATGAGCCTTTATAAAAAAAAAAAAAA
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