EY757519

Overview
NameEY757519
Unique NameEY757519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757519 vs. ExPASy Swiss-Prot
Match: RL15_METNO (50S ribosomal protein L15 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplO PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 1
Query:  166 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEA---AGFLE-GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 624
            +LN +    G+          I +G+G + G G++GQK+R+G  + KGFEGGQMPL+RR+PK     G  + G      VN+  I+    AG L+    V++E L   G+++   R R   +KILG GELS KL F+    S SA   +E AG ++T
Sbjct:    2 KLNEIRDNEGATKNRMRVGRGIGSGKGKTAGRGVKGQKARTGVAI-KGFEGGQMPLHRRLPK----RGFTNPGATDLNEVNIGRIQQAVDAGKLDPSAPVTVEALLAAGIVS---RVRD-GVKILGVGELSAKLTFQVARASKSAVAAIEKAGGSVT 149          
BLAST of EY757519 vs. ExPASy Swiss-Prot
Match: RL15_ERYLH (50S ribosomal protein L15 OS=Erythrobacter litoralis (strain HTCC2594) GN=rplO PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14
Identity = 59/175 (33.71%), Postives = 90/175 (51.43%), Query Frame = 1
Query:  166 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNL----KDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRKKWVKTSVAKNLA 678
            +LN+L    G+          I +G+G + G G +GQKSRSG  + KGFEGGQMPL+ R+PK RG           +  VN+    K I+A       +++ E L++ GL+    R  K  +++LG GEL  K+ F     S  A E +E AG ++ V+P  +   +   A++ A
Sbjct:    2 KLNDLRDNEGARKGRIRVGRGIGSGKGKTGGRGQKGQKSRSGVAI-KGFEGGQMPLHMRLPK-RGFNNPFG---KDFAEVNIGMVQKFIDAKKLDGKKDITEEALREAGLV----RGGKDGVRLLGKGELKAKVKFIVAGASKGAVEAVEKAGGSVEVIPAAQPEHEKKAARSEA 167          
BLAST of EY757519 vs. ExPASy Swiss-Prot
Match: RL15_SINMW (50S ribosomal protein L15 OS=Sinorhizobium medicae (strain WSM419) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.367e-14
Identity = 55/159 (34.59%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  166 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE----GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 630
            +LN +    G+          I +G G + G G++GQK+RSG  +  GFEGGQMP+YRR+PK     G  +    ++V V+L  I+AA   +       V    LK  G+I    R  K  +++L DGEL  K++ +    S  A EK+E AG ++ +L
Sbjct:    2 KLNEIKDNEGATKNRKRLGRGIGSGSGKTAGRGVKGQKARSGVSIN-GFEGGQMPIYRRLPK----RGFNNIFASEFVVVSLGRIQAAVDAKKLDASKTVDAAALKAAGVI----RRVKDGVRVLADGELKAKVSLEVAGASKPAIEKIEKAGGSIKLL 151          
BLAST of EY757519 vs. ExPASy Swiss-Prot
Match: RL15_SACD2 (50S ribosomal protein L15 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.367e-14
Identity = 53/150 (35.33%), Postives = 76/150 (50.67%), Query Frame = 1
Query:  166 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKY-VPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 612
            RLN L P PG           I +G G + G G +G KSRSG  V+ GFEGGQMPL +R+PK      G  + + +    V L ++     +E D + +E L+   LI+ + +  K+ L     GEL+K +  K    +  AK  +EAAG
Sbjct:    2 RLNTLSPAPGRVSAKKRVGRGIGSGLGKTAGRGHKGLKSRSGGSVKPGFEGGQMPLQKRLPKF-----GFTSRISRVTAEVRLAELNK---VEADIIDIEALRAADLIDNNIKRAKVFL----SGELTKAVTIKGLMVTKGAKAAIEAAG 139          
BLAST of EY757519 vs. ExPASy Swiss-Prot
Match: RL15_PHYAS (50S ribosomal protein L15 OS=Phytoplasma australiense GN=rplO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.367e-14
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 1
Query:  145 PVTNVRFRLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 630
            PV N R     LG  PGS             G G + G G +GQ +RSG  +R GFEGGQ+P ++RIPK     G  +    KY  +NL  ++   F E   ++ + L +K +I    ++    +K+LG G L+KKL  KA  FS  A+  + A G  + V+
Sbjct:    7 PVANARKTTKRLGRGPGS-------------GTGKTSGKGHKGQLARSGKTLRPGFEGGQIPFFQRIPK----RGFHNFAQKKYAVLNLTTLQ--NFPEDSVITPQLLLEKKII----KDPLSGIKVLGQGTLTKKLVVKASKFSRQAEASILAVGGKIEVI 145          
BLAST of EY757519 vs. ExPASy Swiss-Prot
Match: RL15_NITHX (50S ribosomal protein L15 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.367e-14
Identity = 55/160 (34.38%), Postives = 84/160 (52.50%), Query Frame = 1
Query:  166 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEG-DEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRK 642
            +L+++    GS          I +G+G + G G +GQ +RSG  + KGFEGGQMPL+RR+PK RG          +     L+D   AG ++    V+ E+L K G++    R  K  +++LG GE+  KL  +    S SA   +E AG T+ +L  +K
Sbjct:    2 KLSDIADNAGSRKKRMRIGRGIGSGKGKTGGRGGKGQTARSGVRI-KGFEGGQMPLHRRLPK-RGFNNIFRVEFAEINLDRLQDAIDAGSIDAKSTVNAESLVKSGVV----RRAKGGVRLLGRGEIKAKLTIEVHGASKSAIAAVEKAGGTVKILAPKK 155          
BLAST of EY757519 vs. ExPASy Swiss-Prot
Match: RL15_MANSM (50S ribosomal protein L15 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.367e-14
Identity = 53/148 (35.81%), Postives = 74/148 (50.00%), Query Frame = 1
Query:  169 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 612
            LN L P  G+          I +G G + G G +GQKSR+G GVR+GFEGGQMPLYRR+PK     G           + L D+     +E + V+LE+LK   +I    +  K+ L     GE+   +  +    +  AK  +EAAG
Sbjct:    3 LNTLAPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRRLPKF----GFTSMKAAVTAEIRLNDLTK---VENNVVTLESLKAANIITKDIQFAKVVLA----GEVKGAVTVRGLRVTKGAKAAIEAAG 139          
BLAST of EY757519 vs. ExPASy Swiss-Prot
Match: RL15_WIGBR (50S ribosomal protein L15 OS=Wigglesworthia glossinidia brevipalpis GN=rplO PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.704e-14
Identity = 53/153 (34.64%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  169 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDE--VSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTL 621
            LN + P   S          I +G+G + G G +GQ+SRSG  VR+GFEGGQMPLYRR+PK      G +     +     K+I+ + F++  +  + L  LKK  +IN     +   +KI+     +KK+N K    S +AK+++E  G T+
Sbjct:    3 LNTISPMKKSNHSSKRKGRGIGSGKGKTSGRGHKGQRSRSGGKVRRGFEGGQMPLYRRLPKF-----GHNKSKKSFFK---KEIKLSEFMKIKDSFIDLIVLKKNKIIN----SKIKIVKIIFSKNFNKKINIKNLKVSKNAKKEIEFFGGTI 143          
BLAST of EY757519 vs. ExPASy Swiss-Prot
Match: RL15_SILST (50S ribosomal protein L15 OS=Silicibacter sp. (strain TM1040) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.704e-14
Identity = 57/158 (36.08%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  166 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEA---AGFLEGDEVSLETLKKKGLINPSGRERKLP-LKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTV 627
            +LN L   PG+            +G+G   G G++GQKSRSG  +  G+EGGQMPLY+R+PK     G       KY  VNL  I+    AG L+   ++ ++L   GL+      RKL  +++L  GE + K        S SA E +  AG  LTV
Sbjct:    2 KLNELRDNPGASPKRTRVGRGPGSGKGKMGGRGIKGQKSRSGVAIN-GYEGGQMPLYQRLPK----RGFNKPNAKKYAVVNLGLIQKFIDAGKLDAASITEDSLVASGLV-----RRKLDGIRVLAKGEFTAKATIAVTGASKSAVEAVSKAGGALTV 149          
BLAST of EY757519 vs. ExPASy Swiss-Prot
Match: RL15_RICBR (50S ribosomal protein L15 OS=Rickettsia bellii (strain RML369-C) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.704e-14
Identity = 56/153 (36.60%), Postives = 83/153 (54.25%), Query Frame = 1
Query:  166 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE----GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 612
            +LN L    G+          I +G+G + G G++GQKSR+G  + KGFEGGQ P+ +R+PK     G       KY  +N+ +IEAA   E     D ++ E L + GLIN S ++    L I  D + +  L+FK  ++S+ AKE +E AG
Sbjct:    2 KLNELYNNIGAKKNKKRVARGIGSGKGKTAGRGVKGQKSRAGVAI-KGFEGGQTPMIKRLPK----RGFNCISSKKYNVINIYNIEAAIAEERLNANDVITKEKLIEIGLINKSNKKLVKLLSICSD-DFNYPLSFKLDSYSSKAKEIVEKAG 148          
The following BLAST results are available for this feature:
BLAST of EY757519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_METNO3.344e-1437.5850S ribosomal protein L15 OS=Methylobacterium nodu... [more]
RL15_ERYLH3.344e-1433.7150S ribosomal protein L15 OS=Erythrobacter litoral... [more]
RL15_SINMW4.367e-1434.5950S ribosomal protein L15 OS=Sinorhizobium medicae... [more]
RL15_SACD24.367e-1435.3350S ribosomal protein L15 OS=Saccharophagus degrad... [more]
RL15_PHYAS4.367e-1434.5750S ribosomal protein L15 OS=Phytoplasma australie... [more]
RL15_NITHX4.367e-1434.3850S ribosomal protein L15 OS=Nitrobacter hamburgen... [more]
RL15_MANSM4.367e-1435.8150S ribosomal protein L15 OS=Mannheimia succinicip... [more]
RL15_WIGBR5.704e-1434.6450S ribosomal protein L15 OS=Wigglesworthia glossi... [more]
RL15_SILST5.704e-1436.0850S ribosomal protein L15 OS=Silicibacter sp. (str... [more]
RL15_RICBR5.704e-1436.6050S ribosomal protein L15 OS=Rickettsia bellii (st... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-024-D03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757519 ID=EY757519; Name=EY757519; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGCAAAACCCTAATGCCAAAACCCCCATCAAGCCTTTGCGT
CCCTCTCAAAGTCCAACAAAGAAATAAACCACCCCAGCTCACTGTCTTAA
ACCAAGCTGCTTCCGCTTCTGCTTCAGCAATTGTTGGTTCGGGTCCCGTT
ACGAATGTACGGTTCCGGTTAAATAACCTGGGCCCACAACCGGGTTCGAG
AAAGAGAGGGAAGAGAAAGGGGAGAGGAATAGCAGCTGGGCAAGGTAACA
GCTGTGGGTTTGGAATGAGAGGTCAGAAATCGAGGTCTGGTCCTGGCGTT
AGAAAGGGTTTTGAAGGTGGTCAAATGCCTCTTTATCGTCGAATTCCTAA
GCTCCGTGGGATTGCCGGAGGTATGCATGCTGGGTTACCTAAGTATGTCC
CTGTTAACTTGAAAGACATAGAAGCAGCTGGTTTTCTAGAGGGGGATGAA
GTCTCACTAGAGACTTTGAAGAAGAAGGGCTTGATCAATCCCTCAGGAAG
AGAAAGGAAACTGCCTTTAAAGATTCTTGGTGATGGAGAATTAAGCAAGA
AGCTGAACTTCAAGGCTCGTGCCTTCTCTACATCAGCAAAGGAGAAGCTT
GAAGCTGCAGGCTGTACCCTCACTGTCTTACCTGGNCGAAAGAAGTGGGT
GAAAACATCAGTAGCTAAGAACCTTGCACGAGCTGAAGAATACTTTCGCC
AGAAGAGAGCTGCTGCAGCTGCATCCGATTNCACTTCAGCTTGAACCACT
TGGNNTTTTTCACTCACTGTAACTAAGTAGAAGCATTTGATTNNGTCTCG
ATCTTTTCTCTGGTTTTANGGTTTCGGGGTAGCAAATGAAAGGAAGATGC
CTATAGCTGAANTTNCTGGATTTGGCTCCTCTTTTGATCCCTCCCTTTTA
AAATTCACTAAACTCTCATGG
back to top