EY757483

Overview
NameEY757483
Unique NameEY757483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.991e-37
Identity = 77/145 (53.10%), Postives = 106/145 (73.10%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 436
            +D+IG+ R +S    GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R  I++IHSR+MN+   ++ +++A   +  +GA+ KAVC EAGM ALR     +T ED+   + +V  K+
Sbjct:  288 LDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 431          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 4.991e-37
Identity = 77/145 (53.10%), Postives = 106/145 (73.10%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 436
            +D+IG+ R +S    GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R  I++IHSR+MN+   ++ +++A   +  +GA+ KAVC EAGM ALR     +T ED+   + +V  K+
Sbjct:  288 LDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 431          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.991e-37
Identity = 81/145 (55.86%), Postives = 102/145 (70.34%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 436
            +D+IG+ R +S   +GD EVQRTMLELLNQLDGF +   IKV+ ATNRIDILD ALLR GR+DRKIEFP PNEE+R  IL+IHSR+MN+   ++  ++A      +GA+LKAVC EAGM ALR     +   DF     +VM K+
Sbjct:  270 LDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDFVEGCVEVMAKK 413          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 4.991e-37
Identity = 80/141 (56.74%), Postives = 102/141 (72.34%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 424
            ID+IG  R   G+ + D E+QRT++ELLNQLDGF++  K+KV+MATNR D LD ALLRPGR+DRKIE   PNE+SRL+ILKIHS ++     ID + + +  +G S A+L+ VCTEAGMFA+R  R  V  EDF  AV KV
Sbjct:  252 IDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKV 391          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.112e-36
Identity = 76/148 (51.35%), Postives = 106/148 (71.62%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 445
            ID+IG+ R +S    GD EVQRTMLELLNQLDGF +S ++K++ ATNR+DILD ALLR GR+DRKIEFP PN   R  IL+IH+R+M++   ++  ++A    G +GA+ KAVC EAGM ALR+ +  ++Q DF   + +V+ ++  K
Sbjct:  250 IDAIGAKRSDSDQ-TGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDFMDGIQEVLSRKKSK 396          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.452e-36
Identity = 76/155 (49.03%), Postives = 114/155 (73.55%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 466
            ID++ S R ES +G GD EVQRT+++LL ++DGF++   +K++ ATNR DILD A+LRPGR DR IE   P+E+ RL+ILKIH+ +MNL + +DL+++A+      GA+LKAVCTEAGMFA+RE R  +  +DF+ A++K+  K+ + +  + +L
Sbjct:  250 IDAVASKRTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEKCSYDMPQL 402          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.452e-36
Identity = 78/151 (51.66%), Postives = 108/151 (71.52%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMS 454
            ID+IG  R   G+ + D E+QRT++ELLNQLDGF+   K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+SR++ILKIH+  +     ID + I +   G +GA+L+ +CTEAGMFA+R  R +V  EDF  AV K+ + +  ++ S
Sbjct:  241 IDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSS 390          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.452e-36
Identity = 76/145 (52.41%), Postives = 106/145 (73.10%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 436
            +D+IG+ R +S    GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R  I++IHSR+MN+   ++ +++A   +  +GA+ KAVC EAG+ ALR     +T ED+   + +V  K+
Sbjct:  253 LDAIGNKRFDSEKA-GDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKK 396          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.897e-36
Identity = 77/145 (53.10%), Postives = 105/145 (72.41%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 436
            +D+IG+ R +S    GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R  I++IHSR+MN+   ++ +++A   +  +GA+ KAVC EAGM ALR     +T ED    + +V  K+
Sbjct:  291 LDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHEDHMEGILEVQAKK 434          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.477e-36
Identity = 81/143 (56.64%), Postives = 105/143 (73.43%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 430
            ID+IG AR + G+G GD+EVQRTMLEL+ QLDGF+    IKVL ATNR + LD+AL+RPGRIDRK+EF  P+ E R  IL+IH++ M + + I  + IA      +GAEL++VCTEAGMFA+R RR   T++DF  AV KV+K
Sbjct:  281 IDAIGGARFDDGAG-GDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVK 422          
The following BLAST results are available for this feature:
BLAST of EY757483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
PRS6A_RAT4.991e-3753.1026S protease regulatory subunit 6A OS=Rattus norve... [more]
PRS6A_HUMAN4.991e-3753.1026S protease regulatory subunit 6A OS=Homo sapiens... [more]
PRS6A_DICDI4.991e-3755.8626S protease regulatory subunit 6A homolog OS=Dict... [more]
PRS10_CAEEL4.991e-3756.74Probable 26S protease regulatory subunit S10B OS=C... [more]
PRS6A_ENCCU1.112e-3651.3526S protease regulatory subunit 6A OS=Encephalitoz... [more]
PSMR_METM71.452e-3649.03Proteasome-activating nucleotidase OS=Methanococcu... [more]
PS10B_ARATH1.452e-3651.6626S protease regulatory subunit S10B homolog B OS=... [more]
PR6AB_XENLA1.452e-3652.4126S protease regulatory subunit 6A-B OS=Xenopus la... [more]
PRS6A_MOUSE1.897e-3653.1026S protease regulatory subunit 6A OS=Mus musculus... [more]
PRS7_SCHPO2.477e-3656.6426S protease regulatory subunit 7 homolog OS=Schiz... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-023-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757483 ID=EY757483; Name=EY757483; organism=Citrus sinensis; type=EST; length=682bp
AATTGACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTG
ACAGTGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGA
TTTGAAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGA
TATTCTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTG
AATTTCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCAT
TCAAGAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGA
GAAGATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAG
CCGGTATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGAT
TTTGAGATGGCAGTGGCCAAGGTCATGAAGAAAGAAACAGAGAAGAACAT
GTCCTTGCGGAAGTTGTGGAAGTAATCATTTCCATGTGCTGTGCTGTGTA
TTTGCTTATTTTCTGAGCAAGATTCAAGTAGTCCTTAACGGCACTCACTC
GTGTTCTGGGACATTTGCACGATAGGCCCTTTTAGCCTGACTGTTGTCTT
TTCTTGCGCTCTAGCCTCTTATGATAAACAAATTTGCAATCTATTTTATC
TAAATTTAAAAAAAAAAAAAAAAAAAAAAAAA
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