EY757483

Overview
NameEY757483
Unique NameEY757483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.101e-35
Identity = 76/141 (53.90%), Postives = 101/141 (71.63%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 424
            ID+IG  R   G+ + D E+QRT++ELLNQ+DGF+  +++K++MATNR D LD ALLRPGR+DRKI    PNE++RLDILKIH+  +     ID + I +  +G +GA+L+ VCTEAGMFA+R     V QEDF  AV KV
Sbjct:  235 IDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.968e-35
Identity = 74/147 (50.34%), Postives = 106/147 (72.11%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 442
            +D+IG+ R +S    GD EVQRTMLELLNQLDGF + +++KV+ ATNR+D LD ALLR GR+DRK+EFP PNEE+R+ IL+IHSR+M +   I+ +++A   +  +GA LK+VC EAGM ALR+    +  E F   + +V  ++++
Sbjct:  287 LDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSK 432          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.775e-34
Identity = 76/141 (53.90%), Postives = 100/141 (70.92%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 424
            ID+IG  R   G+ + D E+QRT++ELLNQ+DGF+  +++K++MATNR D LD ALLRPGR+DRKI    PNE++RLDILKIH+  +     ID + I +  +G +GA+L  VCTEAGMFA+R     V QEDF  AV KV
Sbjct:  235 IDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.746e-34
Identity = 71/141 (50.35%), Postives = 103/141 (73.05%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 424
            ID+IG+ R +S + +GD EVQRT+++LL ++DGF+    +K++ ATNRIDILD+ALLRPGR DR IE P P+ + RL ILKIH++ MN+   ++L +++    G +GA+L+A+C EAGMFA+R  R  V  EDF  A+ K+
Sbjct:  255 IDAIGAHRNDSTT-SGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAIDKL 394          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.810e-34
Identity = 70/140 (50.00%), Postives = 102/140 (72.86%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 421
            ID+IG++R ES + +GD EV RT+++LL ++DGF     ++++ ATNRIDILD+ALLRPGR DR IE P P+ E R+ IL IH   MN+ + +D++ IA + +G +GA+L+++C EAGMFA+R     VT EDFE ++ K
Sbjct:  255 IDAIGASRTESNT-SGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEK 393          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.563e-33
Identity = 69/141 (48.94%), Postives = 101/141 (71.63%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 424
            ID+I S R +S + +GD+EVQRTM++LL+++DGF+    I+++ ATNR D+LD+A+LRPGR DR IE P+PN   R  I +IH+R MN+   +D  ++A      SGA++KA+CTEAGMFA+R+ R  V  +DF+ A  K+
Sbjct:  251 IDAIASKRTDSKT-SGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDFQSAREKL 390          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.272e-32
Identity = 74/156 (47.44%), Postives = 104/156 (66.67%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK-KETEKNMSLRKL 466
            ID+IG  R   G+ + D E+QRT++ELLNQ+DGF+   + K++MATNR D LD ALLRPGR+DRKIE P PNE  R++ILKIH  +++    ID + + +  +G +GA+L+ V TEAG  A++E R +V Q D   A  KV   K+ E  +  +KL
Sbjct:  234 IDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGTIDYQKL 388          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.662e-32
Identity = 75/151 (49.67%), Postives = 102/151 (67.55%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNM 451
            +DSI + R+   +G  D EVQRT+++LL ++DGF+    I+++ ATNR D+LD A+LRPGR DR +  P P  E+R  ILKIH  +M L   ID KK+A+   G SGA+LKA+ TEAGMFA+R+ +  V  EDF  AV KV M  +T+K M
Sbjct:  261 LDSIAARRLNETTG-ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKVSMAADTQKMM 410          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.834e-32
Identity = 74/151 (49.01%), Postives = 101/151 (66.89%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNM 451
            +DSI + R+   +G  D EVQRT+++LL ++DGF+    I+++ ATNR D+LD A+LRPGR DR +  P P  E+R  ILKIH  +M L   ID KK+A+   G SGA+LKA+ TEAGMFA+R  +  V  E+F  AV KV M  +T+K M
Sbjct:  261 LDSIAARRLNETTG-ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKVSMAADTQKMM 410          
BLAST of EY757483 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4)

HSP 1 Score: 136.732 bits (343), Expect = 1.077e-31
Identity = 69/156 (44.23%), Postives = 102/156 (65.38%), Query Frame = 2
Query:    2 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK-KETEKNMSLRKL 466
            +D+IG  R   G+ + D E+QRT++ELL Q+DGF+   + K++MATNR D LD ALLRPGR+DRK+E P PNE  RL+I KIH+ ++      D +   +  +G +GA+++   TEAG FA+R+ R H+  +D   AV KV + K+ E  +  +KL
Sbjct:  283 VDAIGGRRFSEGT-SADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQKL 437          
The following BLAST results are available for this feature:
BLAST of EY757483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
PRS10_HUMAN6.101e-3553.9026S protease regulatory subunit S10B OS=Homo sapie... [more]
PRS6A_SCHPO7.968e-3550.3426S protease regulatory subunit 6A OS=Schizosaccha... [more]
PRS10_BOVIN1.775e-3453.9026S protease regulatory subunit S10B OS=Bos taurus... [more]
PSMR_METMJ6.746e-3450.35Proteasome-activating nucleotidase OS=Methanoculle... [more]
PSMR_METPE8.810e-3450.00Proteasome-activating nucleotidase OS=Methanosphae... [more]
PSMR2_HALSA2.563e-3348.94Proteasome-activating nucleotidase 2 OS=Halobacter... [more]
PRS10_SCHPO1.272e-3247.44Probable 26S protease subunit rpt4 OS=Schizosaccha... [more]
PSMR_METAC1.662e-3249.67Proteasome-activating nucleotidase OS=Methanosarci... [more]
PSMR_METMA2.834e-3249.01Proteasome-activating nucleotidase OS=Methanosarci... [more]
PRS10_YEAST1.077e-3144.2326S protease subunit RPT4 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-023-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757483 ID=EY757483; Name=EY757483; organism=Citrus sinensis; type=EST; length=682bp
AATTGACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTG
ACAGTGAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGA
TTTGAAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGA
TATTCTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTG
AATTTCCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCAT
TCAAGAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGA
GAAGATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAG
CCGGTATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGAT
TTTGAGATGGCAGTGGCCAAGGTCATGAAGAAAGAAACAGAGAAGAACAT
GTCCTTGCGGAAGTTGTGGAAGTAATCATTTCCATGTGCTGTGCTGTGTA
TTTGCTTATTTTCTGAGCAAGATTCAAGTAGTCCTTAACGGCACTCACTC
GTGTTCTGGGACATTTGCACGATAGGCCCTTTTAGCCTGACTGTTGTCTT
TTCTTGCGCTCTAGCCTCTTATGATAAACAAATTTGCAATCTATTTTATC
TAAATTTAAAAAAAAAAAAAAAAAAAAAAAAA
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