EY757478

Overview
NameEY757478
Unique NameEY757478
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length393
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_DROOR (Histone H4 OS=Drosophila orena GN=His4 PE=3 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 2.388e-25
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_DROME (Histone H4 OS=Drosophila melanogaster GN=His4 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.388e-25
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_DROMA (Histone H4 OS=Drosophila mauritiana GN=His4 PE=3 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 2.388e-25
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_DROHY (Histone H4 OS=Drosophila hydei GN=His4 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.388e-25
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_DROER (Histone H4 OS=Drosophila erecta GN=His4 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.388e-25
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_DENKL (Histone H4 OS=Dendronephthya klunzingeri GN=H4DEKL PE=3 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 2.388e-25
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_CHITH (Histone H4 OS=Chironomus thummi thummi GN=His4 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.388e-25
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_CHICK (Histone H4 OS=Gallus gallus GN=H4-I PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.388e-25
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_CHAVR (Histone H4 OS=Chaetopterus variopedatus PE=3 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 2.388e-25
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_CAIMO (Histone H4 OS=Cairina moschata PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.388e-25
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
The following BLAST results are available for this feature:
BLAST of EY757478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_DROOR2.388e-2592.06Histone H4 OS=Drosophila orena GN=His4 PE=3 SV=3[more]
H4_DROME2.388e-2592.06Histone H4 OS=Drosophila melanogaster GN=His4 PE=1... [more]
H4_DROMA2.388e-2592.06Histone H4 OS=Drosophila mauritiana GN=His4 PE=3 S... [more]
H4_DROHY2.388e-2592.06Histone H4 OS=Drosophila hydei GN=His4 PE=3 SV=2[more]
H4_DROER2.388e-2592.06Histone H4 OS=Drosophila erecta GN=His4 PE=3 SV=2[more]
H4_DENKL2.388e-2592.06Histone H4 OS=Dendronephthya klunzingeri GN=H4DEKL... [more]
H4_CHITH2.388e-2592.06Histone H4 OS=Chironomus thummi thummi GN=His4 PE=... [more]
H4_CHICK2.388e-2592.06Histone H4 OS=Gallus gallus GN=H4-I PE=1 SV=2[more]
H4_CHAVR2.388e-2592.06Histone H4 OS=Chaetopterus variopedatus PE=3 SV=3[more]
H4_CAIMO2.388e-2592.06Histone H4 OS=Cairina moschata PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-023-H05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757478 ID=EY757478; Name=EY757478; organism=Citrus sinensis; type=EST; length=393bp
TTCGTCGACCCCGCGTCCGGCTCGTATTTGCGGAGTCAAGCGTATCAGCG
GCTTGATCTACGAGGAGACACGTGGCGTCCTGAAGATATTCTTGGAGAAC
GTCATCCGTGACGCCGTGACCTACACTGAGCACGCCAGGAGAAAGACCGT
GACCGCGATGGACGTCGTTTACGCTCTCAAGAGGCAGGGCAGGACTCTTT
ATGGATTTGGGGGTTAATTGTCTTAGGGTTCTGGAATTAAATGTTAATAG
ATCTTGACTCTAGATCTTGATCTGGTAGATGGGGCTCTTAGTAGTTTGTT
ATTAGGTTGCTGCTTTGTAATTCTATCAAGTTAAATCTTATCTTTATATT
TGAGGCAATATAGAACTGTTTTCTTTGAAAAAAAAAAAAAAAA
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