EY757478

Overview
NameEY757478
Unique NameEY757478
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length393
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_DIAPU (Histone H4 OS=Diadromus pulchellus PE=3 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 2.640e-24
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+F +NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFWQNVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_PHACH (Histone H4 OS=Phanerochaete chrysosporium GN=H4.1 PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.449e-24
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLKIFLENVIRD+VTYTEHA+RKTVTA+DVVYALKR GRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHAKRKTVTALDVVYALKRSGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_AGABI (Histone H4 OS=Agaricus bisporus GN=hhfA PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.449e-24
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLKIFLENVIRD+VTYTEHA+RKTVTA+DVVYALKR GRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHAKRKTVTALDVVYALKRSGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_PHYPO (Histone H4 OS=Physarum polycephalum GN=H41 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 5.882e-24
Identity = 57/63 (90.48%), Postives = 57/63 (90.48%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRIS  IYEETRGVLK FLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISNTIYEETRGVLKTFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_MORAP (Histone H4 OS=Mortierella alpina GN=H4.1 PE=3 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 5.882e-24
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_CHLRE (Histone H4 OS=Chlamydomonas reinhardtii GN=H4-I PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 5.882e-24
Identity = 57/63 (90.48%), Postives = 58/63 (92.06%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETR VLK FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRTVLKTFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_APIME (Histone H4 OS=Apis mellifera PE=3 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 5.882e-24
Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETRGVLK+FLENVIRDAVTYTEH +RKTVTAMDVVYALK QGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHTKRKTVTAMDVVYALKIQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_VOLCA (Histone H4 OS=Volvox carteri GN=H4-I PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.003e-23
Identity = 57/63 (90.48%), Postives = 58/63 (92.06%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETR VLK FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRTVLKNFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_EIMTE (Histone H4 OS=Eimeria tenella PE=3 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 1.003e-23
Identity = 53/63 (84.13%), Postives = 59/63 (93.65%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEE RGVLK+FLEN+I+D+VTYTEHARRKTVTAMD+VY+LKRQGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEEIRGVLKVFLENIIKDSVTYTEHARRKTVTAMDIVYSLKRQGRTLY 99
[Close]
BLAST of EY757478 vs. ExPASy Swiss-Prot
Match: H4_ASCSU (Histone H4 OS=Ascaris suum PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.235e-23
Identity = 55/63 (87.30%), Postives = 57/63 (90.48%), Query Frame = 2 
Query:   14 RPARICGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 202
            R AR  GVKRISGLIYEETR VLK+FLENVIRDAVTY EHA+RKTVTAMDVVYALK QGRTLY
Sbjct:   37 RLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKHQGRTLY 99
The following BLAST results are available for this feature:
BLAST of EY757478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_DIAPU2.640e-2488.89Histone H4 OS=Diadromus pulchellus PE=3 SV=3[more]
H4_PHACH3.449e-2488.89Histone H4 OS=Phanerochaete chrysosporium GN=H4.1 ... [more]
H4_AGABI3.449e-2488.89Histone H4 OS=Agaricus bisporus GN=hhfA PE=3 SV=2[more]
H4_PHYPO5.882e-2490.48Histone H4 OS=Physarum polycephalum GN=H41 PE=3 SV... [more]
H4_MORAP5.882e-2487.30Histone H4 OS=Mortierella alpina GN=H4.1 PE=3 SV=3[more]
H4_CHLRE5.882e-2490.48Histone H4 OS=Chlamydomonas reinhardtii GN=H4-I PE... [more]
H4_APIME5.882e-2488.89Histone H4 OS=Apis mellifera PE=3 SV=3[more]
H4_VOLCA1.003e-2390.48Histone H4 OS=Volvox carteri GN=H4-I PE=3 SV=2[more]
H4_EIMTE1.003e-2384.13Histone H4 OS=Eimeria tenella PE=3 SV=3[more]
H4_ASCSU2.235e-2387.30Histone H4 OS=Ascaris suum PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-023-H05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757478 ID=EY757478; Name=EY757478; organism=Citrus sinensis; type=EST; length=393bp
TTCGTCGACCCCGCGTCCGGCTCGTATTTGCGGAGTCAAGCGTATCAGCG
GCTTGATCTACGAGGAGACACGTGGCGTCCTGAAGATATTCTTGGAGAAC
GTCATCCGTGACGCCGTGACCTACACTGAGCACGCCAGGAGAAAGACCGT
GACCGCGATGGACGTCGTTTACGCTCTCAAGAGGCAGGGCAGGACTCTTT
ATGGATTTGGGGGTTAATTGTCTTAGGGTTCTGGAATTAAATGTTAATAG
ATCTTGACTCTAGATCTTGATCTGGTAGATGGGGCTCTTAGTAGTTTGTT
ATTAGGTTGCTGCTTTGTAATTCTATCAAGTTAAATCTTATCTTTATATT
TGAGGCAATATAGAACTGTTTTCTTTGAAAAAAAAAAAAAAAA
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