EY757395

Overview
NameEY757395
Unique NameEY757395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757395 vs. ExPASy Swiss-Prot
Match: VATL_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit OS=Schizosaccharomyces pombe GN=vma3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 42/152 (27.63%), Postives = 70/152 (46.05%), Query Frame = 2
Query:  176 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAS 631
            F  +G   AI  +  GAA+G    G  +    +  P +  KN I V+               +   L+ +         SL +G+    +G+ VG A L  G  +GI+G +     AQ   LFV +++I IF   LGL+G+IV ++++ +A+
Sbjct:   13 FGVMGCTAAIVFASFGAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAIYGLVVSVLISGNLKQIL--------SLYSGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVAMILILIFAEVLGLYGLIVALLLNTRAT 156          
BLAST of EY757395 vs. ExPASy Swiss-Prot
Match: VATL2_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis elegans GN=vha-2 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 45/147 (30.61%), Postives = 69/147 (46.94%), Query Frame = 2
Query:  176 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIM 616
            F  +G A A   +VLGAA+G   +   +    +  P +  K++I VI               L+ K+ S  A        L  G+A  A+G+  G   L  G  +GI+G +     AQ   LFV +++I IF   LGL+G+IV +I+
Sbjct:   17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVTSASAGY-----DLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158          
BLAST of EY757395 vs. ExPASy Swiss-Prot
Match: VATL2_CAEBR (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis briggsae GN=vha-2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 44/147 (29.93%), Postives = 70/147 (47.62%), Query Frame = 2
Query:  176 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIM 616
            F  +G A A   +VLGAA+G   +   +    +  P +  K++I VI               L+ K+++  A        L  G+A  A+G+  G   L  G  +GI+G +     AQ   LFV +++I IF   LGL+G+IV +I+
Sbjct:   17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVQAASAGY-----DLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158          
BLAST of EY757395 vs. ExPASy Swiss-Prot
Match: VATL_SHEEP (V-type proton ATPase 16 kDa proteolipid subunit OS=Ovis aries GN=ATP6V0C PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11
Identity = 41/150 (27.33%), Postives = 71/150 (47.33%), Query Frame = 2
Query:  176 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 625
            F+ +G + A+  S LGAA+G   +G+ +   ++  P +  K++I V+               +   L            SL   +    +G+ VG + L  G  +GI+G +     AQ   LFV +++I IF   LGL+G+IV +I+S +
Sbjct:   14 FAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLND--------GISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155          
BLAST of EY757395 vs. ExPASy Swiss-Prot
Match: VATL_BOVIN (V-type proton ATPase 16 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0C PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11
Identity = 41/150 (27.33%), Postives = 71/150 (47.33%), Query Frame = 2
Query:  176 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 625
            F+ +G + A+  S LGAA+G   +G+ +   ++  P +  K++I V+               +   L            SL   +    +G+ VG + L  G  +GI+G +     AQ   LFV +++I IF   LGL+G+IV +I+S +
Sbjct:   14 FAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLND--------GISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155          
BLAST of EY757395 vs. ExPASy Swiss-Prot
Match: VATL_ASCSU (V-type proton ATPase 16 kDa proteolipid subunit OS=Ascaris suum GN=12 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 45/147 (30.61%), Postives = 70/147 (47.62%), Query Frame = 2
Query:  176 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIM 616
            F  +G A A   +VLGAA+G   +   +    +  P +  K++I VI               L+ K+ S  A       +L  G+A  A+G+  G   L  G  +GI+G +     AQ   LFV +++I IF   LGL+G+IV +I+
Sbjct:   17 FGYMGAASAQIFTVLGAAYGTAKSAVGISSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLRGKVTSASAGY-----TLDKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158          
BLAST of EY757395 vs. ExPASy Swiss-Prot
Match: VATL1_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 1 OS=Caenorhabditis elegans GN=vha-1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 40/149 (26.85%), Postives = 73/149 (48.99%), Query Frame = 2
Query:  176 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSA 622
            F ++G+  A+  +  G+A+G    G+ +   A+  P +  K +I V+               +  K+E  PA   Y   ++   ++ FA G++ G   L  G  +GI G +   + +Q   +FV +++I IF   LGL+G+IV +I+ A
Sbjct:   25 FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAVIVSGKVE--PAGANY---TINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALILGA 168          
BLAST of EY757395 vs. ExPASy Swiss-Prot
Match: VATL_HUMAN (V-type proton ATPase 16 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0C PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 41/150 (27.33%), Postives = 70/150 (46.67%), Query Frame = 2
Query:  176 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 625
            F+ +G + A+  S LGAA+G   +G+ +   ++  P    K++I V+               +   L            SL   +    +G+ VG + L  G  +GI+G +     AQ   LFV +++I IF   LGL+G+IV +I+S +
Sbjct:   14 FAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIANSLND--------DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155          
The following BLAST results are available for this feature:
BLAST of EY757395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
VATL_SCHPO2.027e-1127.63V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_CAEEL2.647e-1130.61V-type proton ATPase 16 kDa proteolipid subunit 2/... [more]
VATL2_CAEBR2.647e-1129.93V-type proton ATPase 16 kDa proteolipid subunit 2/... [more]
VATL_SHEEP3.457e-1127.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BOVIN3.457e-1127.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ASCSU4.515e-1130.61V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL1_CAEEL4.515e-1126.85V-type proton ATPase 16 kDa proteolipid subunit 1 ... [more]
VATL_HUMAN7.701e-1127.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-H03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757395 ID=EY757395; Name=EY757395; organism=Citrus sinensis; type=EST; length=917bp
CCACGCGTCCGCGCCCTCTCTCGAGCGCTCTTCGTATTATCAAATCAGAT
CAGAACTCATCACAGAAAAAAATCCAAAAAAAAAAAAGAAAAAATTGAAA
AAAATGTCGGGCTCCGTAATGTTGGGAGAATCAAGCTCATGGTCACGCGC
GCTCGTTAAGATATCACCATATACCTTCTCCGCCATCGGCATCGCTGTCG
CCATCGGCGTCTCCGTCCTCGGCGCCGCCTGGGGGATCTACATAACGGGG
AGTAGTTTAATCGGTGCCGCAATCAAGGCTCCTCGTATCACCTCCAAGAA
TCTCATCAGTGTAATTTTTTGTGAAGCTGTTGCTATATATGGGGTCATTG
TTGCAATTATTTTACAAACAAAGCTAGAAAGTGTTCCGGCATCACAGATA
TATGCACCAGAATCACTAAGAGCTGGATATGCCATCTTTGCCTCTGGGAT
CATCGTGGGCTTTGCTAACCTAGTTTGTGGGTTGTGTGTAGGAATAATTG
GAAGCAGCTGTGCATTGTCTGATGCCCAAAACTCGTCCTTGTTTGTGAAG
ATTTTGGTGATTGAGATCTTTGGTAGTGCTCTTGGGTTGTTTGGAGTGAT
TGTTGGAATAATTATGTCAGCTCAAGCATCATGGCCTGCAAAACCAGNGT
AATTTGATCNTTCTTATTCTTTTGGGGATTTCACTGTGGCAGCATGCACT
TTATTTTGTGTACTTCAGCTGCGCTCTTTATCTTGGTGCTTTATATTTTC
ACTAGCAGGGATGTATAAACTGGTGTGACATGCTCTTTCTTTCAGTTTAG
GCTTGGATGTTTCACTTAGAAAAAAAAAAAAGAGAAATCCTGGGAGAGGA
GCTTTATACCCACTGTTGATGAAGGTATTTTACGCATTCAAGGAAACCTG
GTATTTGGAGTCCTCTA
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