EY757386

Overview
NameEY757386
Unique NameEY757386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length603
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM2_STAA8 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain NCTC 8325) GN=sodM PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.522e-16
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2
Query:   14 EGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            +   L GSGW WL ++    +L + TT NQD  +T+  T  P+L  DVWEHAYYL+Y+N +PDY+   WN++NWK   ++YQ
Sbjct:  119 KATTLFGSGWTWLVVNDG--KLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQ 196          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM2_STAA3 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain USA300) GN=sodM PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.522e-16
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2
Query:   14 EGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            +   L GSGW WL ++    +L + TT NQD  +T+  T  P+L  DVWEHAYYL+Y+N +PDY+   WN++NWK   ++YQ
Sbjct:  119 KATTLFGSGWTWLVVNDG--KLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQ 196          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_XANCP (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris GN=sodA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 235
            GSGW WL + T  K++VVE+TANQD  + +  T  P+LG+DVWEHAYYL+Y+N +PDY+   +NV+NW
Sbjct:  127 GSGWAWLSV-TPDKKVVVESTANQDSPLFEGNT--PILGLDVWEHAYYLKYQNRRPDYIGAFYNVVNW 191          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_XANC8 (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sodA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 235
            GSGW WL + T  K++VVE+TANQD  + +  T  P+LG+DVWEHAYYL+Y+N +PDY+   +NV+NW
Sbjct:  127 GSGWAWLSV-TPDKKVVVESTANQDSPLFEGNT--PILGLDVWEHAYYLKYQNRRPDYIGAFYNVVNW 191          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_STRP8 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M18 GN=sodA PE=3 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 36/76 (47.37%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            GSGW WL ++ E  +L + +TANQD  +++     P+L +DVWEHAYYL Y+NV+P+Y+K  + ++NWK  S++YQ
Sbjct:  126 GSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQ 198          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_STRP6 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M6 GN=sodA PE=3 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 36/76 (47.37%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            GSGW WL ++ E  +L + +TANQD  +++     P+L +DVWEHAYYL Y+NV+P+Y+K  + ++NWK  S++YQ
Sbjct:  126 GSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQ 198          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_STRP3 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M3 GN=sodA PE=3 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 36/76 (47.37%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            GSGW WL ++ E  +L + +TANQD  +++     P+L +DVWEHAYYL Y+NV+P+Y+K  + ++NWK  S++YQ
Sbjct:  126 GSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQ 198          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_STRP1 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M1 GN=sodA PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 36/76 (47.37%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            GSGW WL ++ E  +L + +TANQD  +++     P+L +DVWEHAYYL Y+NV+P+Y+K  + ++NWK  S++YQ
Sbjct:  126 GSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIVNWKKVSELYQ 198          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_ENTFA (Superoxide dismutase [Fe] OS=Enterococcus faecalis GN=sodA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 256
            GSGW WL ++    +L + +T NQD  +    T  P+LG+DVWEHAYYL+YKNV+PDY++  WNV+NW   ++++
Sbjct:  128 GSGWAWLVVNNG--KLEITSTPNQDSPLMDGQT--PVLGLDVWEHAYYLKYKNVRPDYIEAFWNVVNWDKVNELF 198          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.112e-15
Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            GSGW WL ++ E K L V +TANQD  + +     P+LG+DVWEHAYYL Y+NV+P+Y+K  + ++NW   +++YQ
Sbjct:  126 GSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198          
The following BLAST results are available for this feature:
BLAST of EY757386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
SODM2_STAA86.522e-1646.34Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus a... [more]
SODM2_STAA36.522e-1646.34Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus a... [more]
SODM_XANCP8.518e-1655.88Superoxide dismutase [Mn] OS=Xanthomonas campestri... [more]
SODM_XANC88.518e-1655.88Superoxide dismutase [Mn] OS=Xanthomonas campestri... [more]
SODM_STRP88.518e-1647.37Superoxide dismutase [Mn] OS=Streptococcus pyogene... [more]
SODM_STRP68.518e-1647.37Superoxide dismutase [Mn] OS=Streptococcus pyogene... [more]
SODM_STRP38.518e-1647.37Superoxide dismutase [Mn] OS=Streptococcus pyogene... [more]
SODM_STRP18.518e-1647.37Superoxide dismutase [Mn] OS=Streptococcus pyogene... [more]
SODM_ENTFA8.518e-1648.00Superoxide dismutase [Fe] OS=Enterococcus faecalis... [more]
SODM_STRAG1.112e-1548.68Superoxide dismutase [Mn/Fe] OS=Streptococcus agal... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-G05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757386 ID=EY757386; Name=EY757386; organism=Citrus sinensis; type=EST; length=603bp
CACGCGTCCGGCTGAGGGTGCAGCTTTGCAGGGCTCTGGATGGGTGTGGC
TTGGTTTAGATACAGAGTTTAAAAGGCTTGTGGTTGAAACTACTGCAAAT
CAGGATCCACTGGTGACTAAAGCCCCAACTCTGGTTCCTTTGCTTGGTAT
AGATGTTTGGGAGCATGCATACTACCTACAGTACAAGAATGTCAAACCAG
ATTATCTGAAAAACATTTGGAACGTAATGAACTGGAAGTATGCTAGTGAT
GTGTATCAGAAAGAATGCCCTTAAGCTTGGAGCTCTTCCTTGAGCATGGA
GTTCTTTGTTTGATCTGGGTTCTCTCTTGGGTTCAAGAGGCGAATACCCT
TGCAGCTTTTCACGCTGAAGTGACAATAAAACGATAATTTGCAACTGATG
ACAGACACCCTTTCTTTTGCAGTGAGTGTTACTTGTGTATCCCTTATGTG
ACATCCAAAATAATATTGGGGTTTATGCTCTTTTTGTATCTCACTATGTG
CACGGATCTGTGAATATGTATGATTGGGTTTCTATTTTCTATTTGTTTAA
TGGCGTAACATCATCAATGCTTTGTTCAAAAAAAAAAAAAAAAAAAAAAA
AAA
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