EY757386

Overview
NameEY757386
Unique NameEY757386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length603
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.112e-15
Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            GSGW WL ++ E K L V +TANQD  + +     P+LG+DVWEHAYYL Y+NV+P+Y+K  + ++NW   +++YQ
Sbjct:  126 GSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.112e-15
Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            GSGW WL ++ E K L V +TANQD  + +     P+LG+DVWEHAYYL Y+NV+P+Y+K  + ++NW   +++YQ
Sbjct:  126 GSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_ASPOR (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus oryzae GN=sodB PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.112e-15
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 2
Query:   26 LQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 259
            LQGSGW WL  +    +L + +T +QDP+  K    VP+ G+D+WEHAYYLQY N K  Y++ IW V+NW+ A D ++
Sbjct:  126 LQGSGWGWLVANGPGGKLEIVSTKDQDPVTDK----VPVFGVDMWEHAYYLQYFNNKASYVEGIWKVLNWRTAEDRFK 199          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_SHIFL (Superoxide dismutase [Mn] OS=Shigella flexneri GN=sodA PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.453e-15
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 247
            GSGW WL L  +  +L V +TANQD PL+ +A    +  P+LG+DVWEHAYYL+++N +PDY+K  WNV+NW  A+
Sbjct:  126 GSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_SALTY (Superoxide dismutase [Mn] OS=Salmonella typhimurium GN=sodA PE=3 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.453e-15
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 247
            GSGW WL L  +  +L V +TANQD PL+ +A    +  P+LG+DVWEHAYYL+++N +PDY+K  WNV+NW  A+
Sbjct:  126 GSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.453e-15
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 247
            GSGW WL L  +  +L V +TANQD PL+ +A    +  P+LG+DVWEHAYYL+++N +PDY+K  WNV+NW  A+
Sbjct:  126 GSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_ECO57 (Superoxide dismutase [Mn] OS=Escherichia coli O157:H7 GN=sodA PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.453e-15
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 247
            GSGW WL L  +  +L V +TANQD PL+ +A    +  P+LG+DVWEHAYYL+++N +PDY+K  WNV+NW  A+
Sbjct:  126 GSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAA 199          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_YEREN (Superoxide dismutase [Mn] OS=Yersinia enterocolitica GN=sodA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.898e-15
Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 2
Query:   11 AEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 247
            A  A   GSGW WL L  + K L V +TANQD PL+ +A +     P++G+DVWEHAYYL+++N +PDY+K  WNV+NW  A+
Sbjct:  119 AAAATRFGSGWAWLVLKDDGK-LAVVSTANQDSPLMGEAVSGASGFPIVGLDVWEHAYYLKFQNRRPDYIKAFWNVVNWDEAA 200          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM_STRMU (Superoxide dismutase [Mn/Fe] OS=Streptococcus mutans GN=sodA PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 1.898e-15
Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 2
Query:   32 GSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 256
            GSGW WL +D E K L V +TANQD  +++   L P+L +DVWEHAYYL Y+NV+P+Y+K  + V+NW   + +Y
Sbjct:  126 GSGWAWLVVDKEGK-LEVTSTANQDTPISQG--LKPILALDVWEHAYYLNYRNVRPNYIKAFFEVINWNTVARLY 197          
BLAST of EY757386 vs. ExPASy Swiss-Prot
Match: SODM1_BACCR (Superoxide dismutase [Mn] 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.898e-15
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 2
Query:   17 GAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 262
            GA   GSGW WL ++     L V +T NQD  +T+  T  P++G+DVWEHAYYL Y+N +PDY+   WNV++W  A   YQ+
Sbjct:  139 GATRFGSGWAWLVVNNG--ELEVTSTPNQDSPLTEGKT--PVIGLDVWEHAYYLNYQNRRPDYIGAFWNVVDWNAAEKRYQE 216          
The following BLAST results are available for this feature:
BLAST of EY757386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
SODM_STRA51.112e-1548.68Superoxide dismutase [Mn/Fe] OS=Streptococcus agal... [more]
SODM_STRA31.112e-1548.68Superoxide dismutase [Mn/Fe] OS=Streptococcus agal... [more]
SODM_ASPOR1.112e-1547.44Superoxide dismutase [Mn], mitochondrial OS=Asperg... [more]
SODM_SHIFL1.453e-1552.63Superoxide dismutase [Mn] OS=Shigella flexneri GN=... [more]
SODM_SALTY1.453e-1552.63Superoxide dismutase [Mn] OS=Salmonella typhimuriu... [more]
SODM_SALTI1.453e-1552.63Superoxide dismutase [Mn] OS=Salmonella typhi GN=s... [more]
SODM_ECO571.453e-1552.63Superoxide dismutase [Mn] OS=Escherichia coli O157... [more]
SODM_YEREN1.898e-1550.60Superoxide dismutase [Mn] OS=Yersinia enterocoliti... [more]
SODM_STRMU1.898e-1550.67Superoxide dismutase [Mn/Fe] OS=Streptococcus muta... [more]
SODM1_BACCR1.898e-1547.56Superoxide dismutase [Mn] 1 OS=Bacillus cereus (st... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-G05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757386 ID=EY757386; Name=EY757386; organism=Citrus sinensis; type=EST; length=603bp
CACGCGTCCGGCTGAGGGTGCAGCTTTGCAGGGCTCTGGATGGGTGTGGC
TTGGTTTAGATACAGAGTTTAAAAGGCTTGTGGTTGAAACTACTGCAAAT
CAGGATCCACTGGTGACTAAAGCCCCAACTCTGGTTCCTTTGCTTGGTAT
AGATGTTTGGGAGCATGCATACTACCTACAGTACAAGAATGTCAAACCAG
ATTATCTGAAAAACATTTGGAACGTAATGAACTGGAAGTATGCTAGTGAT
GTGTATCAGAAAGAATGCCCTTAAGCTTGGAGCTCTTCCTTGAGCATGGA
GTTCTTTGTTTGATCTGGGTTCTCTCTTGGGTTCAAGAGGCGAATACCCT
TGCAGCTTTTCACGCTGAAGTGACAATAAAACGATAATTTGCAACTGATG
ACAGACACCCTTTCTTTTGCAGTGAGTGTTACTTGTGTATCCCTTATGTG
ACATCCAAAATAATATTGGGGTTTATGCTCTTTTTGTATCTCACTATGTG
CACGGATCTGTGAATATGTATGATTGGGTTTCTATTTTCTATTTGTTTAA
TGGCGTAACATCATCAATGCTTTGTTCAAAAAAAAAAAAAAAAAAAAAAA
AAA
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