EY757381

Overview
NameEY757381
Unique NameEY757381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757381 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 2
Query:   86 YGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDIARVAPTDHLY 454
            Y EP++++  T+++ D+   +    +    RPFGV+L+IAG D++ P LY T+PSG +    A AIG G   A   L++ Y +DLT+++   +AL  L   ++  EK+TPN V+I   +    L+
Sbjct:  105 YDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLF 226          
BLAST of EY757381 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 2
Query:   86 YGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDIARVAPTDHLY 454
            Y EP++++  T+++ D+   +    +    RPFGV+L+IAG D++ P LY T+PSG +    A AIG G   A   L++ Y +DLT+++   +AL  L   ++  EK+TPN V+I   +    L+
Sbjct:  105 YDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLF 226          
BLAST of EY757381 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = 2
Query:   41 LLNMQGLKLRII*FSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIARV 433
            L+N   ++ +   FSY EPM VE   Q+LCD    +    +     PFGVS L AG D+N G  L+ +DPSG +    A AIG+ ++ A S L++ Y  D+T +EA  +AL +L + M+   +T   +++A V
Sbjct:   86 LINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGY---TQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEV 215          
BLAST of EY757381 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 41/103 (39.81%), Postives = 63/103 (61.17%), Query Frame = 2
Query:  116 TQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDI 424
            TQ + + A    E  +    RPFGVSLLIAG D+NGP LY  DPSG+++   A A+G     A + L+++Y +D+ L +A   A+  LK+  E +++ NN++I
Sbjct:  108 TQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEI 210          
BLAST of EY757381 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 41/103 (39.81%), Postives = 63/103 (61.17%), Query Frame = 2
Query:  116 TQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDI 424
            TQ + + A    E  +    RPFGVSLLIAG D+NGP LY  DPSG+++   A A+G     A + L+++Y +D+ L +A   A+  LK+  E +++ NN++I
Sbjct:  108 TQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEI 210          
BLAST of EY757381 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15
Identity = 51/153 (33.33%), Postives = 83/153 (54.25%), Query Frame = 2
Query:   41 LLNMQGLKLRII*FSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTDHLY---TPSEVEAVINRL 490
            L+N   L+ +I   +YGEP  V    + +CDL        +    RPFG +LL+AG ++  P LY TDPSG ++   A AIGSG   A +  +E+Y  D+ L++A  +AL  L + ME   + +N+++A +   D  +   T  E+E  ++ +
Sbjct:   90 LVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMH---TQYGGVRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTMENP-SADNIEVAVITVKDKKFRKLTRDEIEKYLSEV 237          
BLAST of EY757381 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.903e-15
Identity = 41/139 (29.50%), Postives = 69/139 (49.64%), Query Frame = 2
Query:   83 SYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTDHLYT---PSEVEAVINRL 490
            SY E + VE  ++ +CD    +    +    RP+G +LLIAG D+N P L+ TDPSG   +  A AIG+G        +  Y +D+ +  A  + +  L +  E K     +++  V+  D  +    P EVE  ++++
Sbjct:  103 SYDELIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQI 238          

HSP 2 Score: 31.5722 bits (70), Expect = 9.903e-15
Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = 1
Query:   13 SGLIADARTLVEHARVETQ 69
            SGL+ADAR+LV+ ARVE Q
Sbjct:   80 SGLVADARSLVDRARVEAQ 98          
BLAST of EY757381 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.930e-15
Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 2
Query:   83 SYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTD--HLYTPSEVE 472
            +YG  + +E+  + + D   ++    +    RP+GVSL+ AG D+ GP L+  DP+GT  +  A AIGSG +   S L+ +Y ++L  +EA T+ +  LK  +EE       +IA +   +   +Y   EV+
Sbjct:  102 TYGSLVNIENLVKRVADQMQQY---TQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVK 230          

HSP 2 Score: 30.4166 bits (67), Expect = 9.930e-15
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 1
Query:    7 VRSGLIADARTLVEHARVETQNHMI 81
            V SGL+ADAR LV+ AR+  Q   +
Sbjct:   77 VTSGLVADARVLVDFARISAQQEKV 101          
BLAST of EY757381 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.171e-14
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 2
Query:   86 YGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA 436
            YGEP+ +E+ T+ + D   ++    +   +RPFGV+LLI G +   P LY TDPSGT ++  A +IG+        L+E +  DLTL E   +AL  +    +E   P+ VD+A V+
Sbjct:  105 YGEPIGIETLTKEVTDHIQQY---TQVGGARPFGVALLIGGVENGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDLTLDEGIELALEAIASTSDEGTAPDGVDVATVS 218          
BLAST of EY757381 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.171e-14
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 2
Query:   41 LLNMQGLKLRII*FSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIARVAPTD------HLYTPSEVEAVI 481
            L+N   ++ +   F Y EPM VE   Q+LCD    +    +    RPFGVS L AG D++ G  LY +DPSG +    A A+G+ ++ A S L++ Y  D T +EA  +AL +L + M+   +T   +++A V  T       H+++P  +  ++
Sbjct:   86 LINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVKYHVHSPESLTKLL 237          
The following BLAST results are available for this feature:
BLAST of EY757381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PSMA_SULIK6.866e-1535.20Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]
PSMA_SULIA6.866e-1535.20Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]
PSA4_PETHY6.866e-1536.84Proteasome subunit alpha type-4 OS=Petunia hybrida... [more]
PSA2_ORYSJ6.866e-1539.81Proteasome subunit alpha type-2 OS=Oryza sativa su... [more]
PSA2_ORYSI6.866e-1539.81Proteasome subunit alpha type-2 OS=Oryza sativa su... [more]
PSMA_PYRFU8.968e-1533.33Proteasome subunit alpha OS=Pyrococcus furiosus GN... [more]
PSMA_METMA9.903e-1529.50Proteasome subunit alpha OS=Methanosarcina mazei G... [more]
PSMA_THEAC9.930e-1531.82Proteasome subunit alpha OS=Thermoplasma acidophil... [more]
PSMA1_HALVO1.171e-1436.75Proteasome subunit alpha 1 OS=Halobacterium volcan... [more]
PSA4_ARATH1.171e-1432.90Proteasome subunit alpha type-4 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-F11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757381 ID=EY757381; Name=EY757381; organism=Citrus sinensis; type=EST; length=788bp
CCACGCGTCCGGAGTGGATTGATTGCTGATGCTCGTACACTTGTTGAACA
TGCAAGGGTTGAAACTCAGAATCATATGATTCTCATATGGTGAGCCAATG
ACCGTAGAATCTACTACACAAGCACTCTGTGACCTGGCGCTACGCTTTGG
TGAAGGCGATGAAGAATCCATGTCTCGACCATTTGGAGTATCCCTTCTTA
TTGCTGGATCCGACGAGAATGGACCTAGCCTGTACTATACAGATCCATCT
GGCACATTCTGGCAATGCAATGCAAAGGCTATTGGTTCAGGTTCAGAAGG
AGCTGACAGTTCTCTCCAAGAGCAATATAACAAGGATTTAACCCTTCAGG
AAGCAGAGACAATTGCTCTATCAATTTTGAAGCAAGTTATGGAAGAAAAG
GTCACTCCAAACAATGTTGATATCGCAAGGGTAGCTCCAACGGATCATCT
CTATACCCCTTCTGAGGTGGAGGCTGTCATCAATCGCCTATGAGTATCCA
GAGAAAATCATCTTTAAAATTTCTTCCCTGGCTTCAGTGGTGTTTCTTCA
GTTCTTTGCAGTGCAAGTGCACTTCGTAGTTTGTTTGTTAGGGGAAACAA
TTATATTTGCTTATGATTGGGATTGCACCCATTTGAACCTTTCTGCTTTG
GTGCTGGGTTTGAGCTGCCTATCATAACCCCGATATCTGTGTCCGTGCAG
AACTGAAGTACTTCTCAGTTGTATGAACGATATGAACCTAATGGAAACTT
AGATTAAAATCTTGTTTTTAAGTTAAATAAAAAAAAAA
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