EY757322

Overview
NameEY757322
Unique NameEY757322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_TREPA (Thioredoxin OS=Treponema pallidum GN=trxA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11
Identity = 36/88 (40.91%), Postives = 58/88 (65.91%), Query Frame = 3
Query:  258 SSQLMVIDFAASWCGPCKIMEPELRKMASTY-SDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIG-ARKDELLKKIEKH 515
            ++ L+++DF A WCG CK++ P L ++ S   S V   K++VD+  D+A EF V ++PT ++ K GKEV+R IG   K ++L  I+K+
Sbjct:   17 TNPLVIVDFWAPWCGSCKMLGPVLEEVESEVGSGVVIGKLNVDDDQDLAVEFNVASIPTLIVFKDGKEVDRSIGFVDKSKILTLIQKN 104          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO1_SYNY3 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803) GN=slr0233 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 31/77 (40.26%), Postives = 52/77 (67.53%), Query Frame = 3
Query:  258 SSQLMVIDFAASWCGPCKIMEPELRKMASTY-SDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARK 485
            S + +++DF A+WCGPC++M P L ++ S     +Q VKID D+   +A ++Q+Q++PT VL K G+ V R+ G ++
Sbjct:   17 SPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKYPAIATQYQIQSLPTLVLFKQGQPVHRMEGVQQ 93          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: GLRX3_MOUSE (Glutaredoxin-3 OS=Mus musculus GN=Glrx3 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 36/113 (31.86%), Postives = 65/113 (57.52%), Query Frame = 3
Query:  252 KTSSQLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDELLKKIEKH---RAQQ*QTSRHKPTDCSLMVSLL 581
            KT S L+V+ F A W   C  M   + ++A  +  V FVK++ + + +V++++++ ++PTF+  K  ++V+R+ GA   EL KK+++H    A    T+ H   D SL +  L
Sbjct:   31 KTKS-LLVVHFWAPWAPQCVQMNDVMAELAKEHPHVSFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKVDRLDGAHAPELTKKVQRHVSSGAFPPSTNEHLKEDLSLRLKKL 142          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: GLRX3_BOVIN (Glutaredoxin-3 OS=Bos taurus GN=GLRX3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 31/111 (27.93%), Postives = 62/111 (55.86%), Query Frame = 3
Query:  258 SSQLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDELLKKIEKHRAQ---Q*QTSRHKPTDCSLMVSLL 581
            +  L+V+ F A W   C  M   + ++A  +  V FVK++ + + +V++++++ ++PTF+  K  ++++R+ GA   EL KK+++H +        S H   D SL +  L
Sbjct:   29 AKSLLVVHFWAPWAPQCAQMNDVMAELAKEHQQVSFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHASSGSFSPSGSEHPKEDLSLRLKKL 139          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: TXND2_HUMAN (Thioredoxin domain-containing protein 2 OS=Homo sapiens GN=TXNDC2 PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 26/81 (32.10%), Postives = 50/81 (61.73%), Query Frame = 3
Query:  252 KTSSQLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            +   +L+ +DF+A+WCGPC+ + P    ++  + DV F+++D D   +V +E  +  +PTF   K  ++V+ + GA K++L
Sbjct:  465 EAGERLVAVDFSATWCGPCRTIRPFFHALSVKHEDVVFLEVDADNCEEVVRECAIMCVPTFQFYKKEEKVDELCGALKEKL 545          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO1_CHLTE (Thioredoxin-1 OS=Chlorobium tepidum GN=trx1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 3
Query:  243 DSCKTSSQLMVIDFAASWCGPCKIMEPELRKMASTYSD-VQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGA-----RKDELLKKI 506
            D  +TS   + IDF A WCGPCK++ P ++++AS +   +  VK++VD+  D A  FQVQ +P  +L  GG+   R  GA      + E+LK I
Sbjct:    7 DLIRTSELPVFIDFWADWCGPCKMVAPSVKQLASEFKGRLIVVKVNVDQQPDAAARFQVQGIPALMLFVGGQLKWRTAGAIPYQQMRQEVLKAI 100          
The following BLAST results are available for this feature:
BLAST of EY757322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
THIO_TREPA2.663e-1140.91Thioredoxin OS=Treponema pallidum GN=trxA PE=3 SV=... [more]
THIO1_SYNY33.478e-1140.26Thioredoxin-like protein slr0233 OS=Synechocystis ... [more]
GLRX3_MOUSE5.933e-1131.86Glutaredoxin-3 OS=Mus musculus GN=Glrx3 PE=1 SV=1[more]
GLRX3_BOVIN5.933e-1127.93Glutaredoxin-3 OS=Bos taurus GN=GLRX3 PE=2 SV=1[more]
TXND2_HUMAN7.749e-1132.10Thioredoxin domain-containing protein 2 OS=Homo sa... [more]
THIO1_CHLTE7.749e-1139.36Thioredoxin-1 OS=Chlorobium tepidum GN=trx1 PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-A04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757322 ID=EY757322; Name=EY757322; organism=Citrus sinensis; type=EST; length=783bp
TTCGTCAACCCCGCGTCCGCTCCACTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCATAATCCCCCTTCTATAAACGAATCCATTACTATTGCGTCGTCTC
GGCTTGTTCTTGTTTAAAGATGGGGGGTATTCTTTCAAACATTTTTGGGG
CCGGAGGATCCGACGGCCAAGATTCACCGCACTCAGAATCTGCTACCAAC
GTCATGTCGTTTCACTCGTCCGCCAGATGGCAGCTCCATTTCGATTCCTG
CAAAACTTCTTCCCAATTGATGGTGATAGATTTTGCGGCGTCGTGGTGTG
GGCCCTGCAAGATCATGGAACCGGAACTGCGTAAGATGGCTTCGACCTAC
TCCGATGTCCAGTTCGTCAAGATTGATGTTGATGAGTTGTCTGATGTGGC
GCAAGAGTTTCAGGTGCAGGCAATGCCTACGTTTGTGTTGGTGAAGGGAG
GGAAGGAAGTTGAGAGGGTGATTGGTGCTCGAAAGGATGAGCTTTTGAAG
AAAATTGAGAAACACAGAGCTCAGCAGTGACAGACCAGCCGCCATAAGCC
GACTGATTGCTCGCTCATGGTCTCTCTCTTATATATGTTTCGCTTTGTTG
TATTTTCCATTGGGAAAATTGACTTTGATCAATTCTCATGATGATGATGC
GCTCTCCATCTTTATGTAATAATAAATTCTCTTTCAACGAATCTATCATA
TTATGNATTTCCCTATTTTATCTTCAGGTTCTCCTGCTTAAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGGCCGGCCCTCCTGA
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