EY757322

Overview
NameEY757322
Unique NameEY757322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_MACMU (Thioredoxin OS=Macaca mulatta GN=TXN PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.690e-16
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  201 VMSFHSSARWQLHFDSCKTSSQLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            V    S A +Q   D      +L+V+DF+A+WCGPCK+++P    ++  YS+V F+++DVD+  DVA E +V+ MPTF   K G++V    GA K++L
Sbjct:    2 VKQIESKAAFQEALDDA--GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKL 97          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO2_DROME (Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.690e-16
Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = 3
Query:  204 MSFHSSARWQLHFDSCKTSSQLMVIDFAASWCGPCKIMEPELRKMASTYSD-VQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            + FH  A   L     K S +L+V+DF A+WCGPCK++ P+L ++++ ++D V  +K+DVDE  D+A E+ + +MPTFV +K G +VE   GA    L
Sbjct:   11 LHFHLQA--DLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRL 106          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_HORSE (Thioredoxin OS=Equus caballus GN=TXN PE=3 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16
Identity = 35/77 (45.45%), Postives = 57/77 (74.03%), Query Frame = 3
Query:  264 QLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            +L+V+DF+A+WCGPCK+++P    ++  YS+V F+++DVD+  DVA E +V+ MPTF   K G++V+   GA K++L
Sbjct:   21 KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQFFKKGQKVDEFSGANKEKL 97          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_CHICK (Thioredoxin OS=Gallus gallus GN=TXN PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16
Identity = 36/82 (43.90%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  264 QLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDELLKKIE 509
            +L+V+DF+A+WCGPCK+++P    +   + DV F++IDVD+  DVA    V+ MPTF   K GK+V+   GA K++L + I+
Sbjct:   21 KLVVVDFSATWCGPCKMIKPFFHSLCDKFGDVVFIEIDVDDAQDVATHCDVKCMPTFQFYKNGKKVQEFSGANKEKLEETIK 102          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_SHEEP (Thioredoxin OS=Ovis aries GN=TXN PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 35/77 (45.45%), Postives = 56/77 (72.73%), Query Frame = 3
Query:  264 QLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            +L+V+DF+A+WCGPCK+++P    ++  YS+V F+++DVD+  DVA E +V+ MPTF   K G++V    GA K++L
Sbjct:   21 KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQFFKKGQKVSEFSGANKEKL 97          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_PENCH (Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  270 MVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGA 479
            +V+DF A+WCGPCK + P L K++ T++ +QF K+DVDELS+VA    V AMPTF   KGG+  E V GA
Sbjct:   23 VVVDFHATWCGPCKAIAPALEKLSETHTGIQFYKVDVDELSEVAASNGVSAMPTFHFYKGGERNEEVKGA 92          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_PIG (Thioredoxin OS=Sus scrofa GN=TXN PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15
Identity = 35/77 (45.45%), Postives = 56/77 (72.73%), Query Frame = 3
Query:  264 QLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            +L+V+DF+A+WCGPCK+++P    ++  YS+V F+++DVD+  DVA E +V+ MPTF   K G++V    GA K++L
Sbjct:   21 KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKL 97          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_HUMAN (Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15
Identity = 39/98 (39.80%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  201 VMSFHSSARWQLHFDSCKTSSQLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            V    S   +Q   D+     +L+V+DF+A+WCGPCK+++P    ++  YS+V F+++DVD+  DVA E +V+ MPTF   K G++V    GA K++L
Sbjct:    2 VKQIESKTAFQEALDAA--GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKL 97          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_CHLMU (Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15
Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 3
Query:  258 SSQLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGAR-KDELLKKIEKHR 518
            +S L+++DF A WCGPCK++ P L  +A+    V  +K+D+D     A++F V ++PT +L K GKEVER +G + KD L+K I KH+
Sbjct:   15 ASGLVLVDFFAEWCGPCKMLTPVLEALAAELPYVTILKLDIDASPRPAEQFGVSSIPTLILFKDGKEVERSVGLKDKDSLVKLISKHQ 102          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_CALJA (Thioredoxin OS=Callithrix jacchus GN=TXN PE=3 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15
Identity = 35/77 (45.45%), Postives = 56/77 (72.73%), Query Frame = 3
Query:  264 QLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            +L+V+DF+A+WCGPCK+++P    ++  YS+V F+++DVD+  DVA E +V+ MPTF   K G++V    GA K++L
Sbjct:   21 KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKL 97          
The following BLAST results are available for this feature:
BLAST of EY757322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
THIO_MACMU4.690e-1640.82Thioredoxin OS=Macaca mulatta GN=TXN PE=3 SV=2[more]
THIO2_DROME4.690e-1641.84Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 ... [more]
THIO_HORSE6.126e-1645.45Thioredoxin OS=Equus caballus GN=TXN PE=3 SV=3[more]
THIO_CHICK6.126e-1643.90Thioredoxin OS=Gallus gallus GN=TXN PE=3 SV=2[more]
THIO_SHEEP1.045e-1545.45Thioredoxin OS=Ovis aries GN=TXN PE=3 SV=2[more]
THIO_PENCH1.045e-1554.29Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=... [more]
THIO_PIG1.365e-1545.45Thioredoxin OS=Sus scrofa GN=TXN PE=1 SV=3[more]
THIO_HUMAN1.365e-1539.80Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3[more]
THIO_CHLMU1.365e-1544.32Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV... [more]
THIO_CALJA1.365e-1545.45Thioredoxin OS=Callithrix jacchus GN=TXN PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-A04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757322 ID=EY757322; Name=EY757322; organism=Citrus sinensis; type=EST; length=783bp
TTCGTCAACCCCGCGTCCGCTCCACTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCATAATCCCCCTTCTATAAACGAATCCATTACTATTGCGTCGTCTC
GGCTTGTTCTTGTTTAAAGATGGGGGGTATTCTTTCAAACATTTTTGGGG
CCGGAGGATCCGACGGCCAAGATTCACCGCACTCAGAATCTGCTACCAAC
GTCATGTCGTTTCACTCGTCCGCCAGATGGCAGCTCCATTTCGATTCCTG
CAAAACTTCTTCCCAATTGATGGTGATAGATTTTGCGGCGTCGTGGTGTG
GGCCCTGCAAGATCATGGAACCGGAACTGCGTAAGATGGCTTCGACCTAC
TCCGATGTCCAGTTCGTCAAGATTGATGTTGATGAGTTGTCTGATGTGGC
GCAAGAGTTTCAGGTGCAGGCAATGCCTACGTTTGTGTTGGTGAAGGGAG
GGAAGGAAGTTGAGAGGGTGATTGGTGCTCGAAAGGATGAGCTTTTGAAG
AAAATTGAGAAACACAGAGCTCAGCAGTGACAGACCAGCCGCCATAAGCC
GACTGATTGCTCGCTCATGGTCTCTCTCTTATATATGTTTCGCTTTGTTG
TATTTTCCATTGGGAAAATTGACTTTGATCAATTCTCATGATGATGATGC
GCTCTCCATCTTTATGTAATAATAAATTCTCTTTCAACGAATCTATCATA
TTATGNATTTCCCTATTTTATCTTCAGGTTCTCCTGCTTAAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGGCCGGCCCTCCTGA
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