EY757322

Overview
NameEY757322
Unique NameEY757322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_ECHGR (Thioredoxin OS=Echinococcus granulosus GN=TRX PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15
Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  264 QLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDELLKKIE 509
            +L+V DF A+WCGPCK + P+L  MA     V FVK+DVDE  DVA++++V AMPT ++ K G E+  V+GA +  + + I+
Sbjct:   23 KLLVCDFFATWCGPCKSLAPKLDAMAKENEKVIFVKLDVDECQDVAEKYRVTAMPTLIVFKNGCEIGHVVGANEAGIRELIQ 104          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_BOVIN (Thioredoxin OS=Bos taurus GN=TXN PE=3 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15
Identity = 35/77 (45.45%), Postives = 56/77 (72.73%), Query Frame = 3
Query:  264 QLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            +L+V+DF+A+WCGPCK+++P    ++  YS+V F+++DVD+  DVA E +V+ MPTF   K G++V    GA K++L
Sbjct:   21 KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQFFKKGQKVGEFSGANKEKL 97          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_COPCM (Thioredoxin OS=Coprinus comatus PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.328e-15
Identity = 34/96 (35.42%), Postives = 63/96 (65.62%), Query Frame = 3
Query:  240 FDSCKTSSQLMVIDFAASWCGPCKIMEPELRKMASTY--SDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDELLKKIEKHRA 521
            F+    S ++++IDF A+WCGPC+++ P   K +  Y  +++ F K+DVD  SD+++E +++AMPTF + K G++++ ++GA    L   ++K  A
Sbjct:   11 FNKLTNSGKIIIIDFWATWCGPCRVISPIFEKFSEKYGANNIVFAKVDVDTASDISEEAKIRAMPTFQVYKDGQKIDELVGANPTALESLVQKSLA 106          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_MOUSE (Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.040e-15
Identity = 35/84 (41.67%), Postives = 58/84 (69.05%), Query Frame = 3
Query:  264 QLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDELLKKIEKH 515
            +L+V+DF+A+WCGPCK+++P    +   YS+V F+++DVD+  DVA + +V+ MPTF   K G++V    GA K++L   I ++
Sbjct:   21 KLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDVDDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASITEY 104          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_RABIT (Thioredoxin OS=Oryctolagus cuniculus GN=TXN PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.971e-15
Identity = 37/98 (37.76%), Postives = 63/98 (64.29%), Query Frame = 3
Query:  201 VMSFHSSARWQLHFDSCKTSSQLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            V    S + +Q   DS     +L+V+DF+A+WCGPCK+++P    ++  +++V F+++DVD+  D+A E +V+ MPTF   K G++V    GA K++L
Sbjct:    2 VKQIESKSAFQEVLDSA--GDKLVVVDFSATWCGPCKMIKPFFHALSEKFNNVVFIEVDVDDCKDIAAECEVKCMPTFQFFKKGQKVGEFSGANKEKL 97          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_RAT (Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.186e-15
Identity = 34/77 (44.16%), Postives = 55/77 (71.43%), Query Frame = 3
Query:  264 QLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDEL 494
            +L+V+DF+A+WCGPCK+++P    +   YS+V F+++DVD+  DVA + +V+ MPTF   K G++V    GA K++L
Sbjct:   21 KLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDVDDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKL 97          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: TRXH_CHLRE (Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 6.773e-15
Identity = 39/109 (35.78%), Postives = 65/109 (59.63%), Query Frame = 3
Query:  198 NVMSFHSSARWQLHFDSCKTSSQLMVIDFAASWCGPCKIMEPELRKMASTYSD-VQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDELLKKIEKHRA 521
            +V+   S A W       K   + +V+DF A+WCGPCK++ P    +++ Y+  V F+K+DVD ++ VA+   + AMPTF + K G + + ++GA +D+L   + KH A
Sbjct:    4 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKHAA 112          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.773e-15
Identity = 30/86 (34.88%), Postives = 58/86 (67.44%), Query Frame = 3
Query:  258 SSQLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIGARKDELLKKIEKH 515
            +++L++IDF A+WCGPC+++ P   + ++ Y +  F+K++ D   D+ Q + + AMPTF+ +K  ++V+ V GA +  + +KI +H
Sbjct:   21 ANRLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKIRQH 106          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_GEOCY (Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.155e-14
Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 3
Query:  264 QLMVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEV-ERVIGARKDELLKKIEKHR 518
            +L+VIDF ASWCGPC+ + P+  +MA  + DV F K+DVDE  + A+  ++QAMPTF   K GK + + V GA +  L +KI+K++
Sbjct:   21 KLVVIDFTASWCGPCQRIAPKYVEMAKEFPDVIFYKVDVDENDETAEAEKIQAMPTFKFYKSGKALSDYVQGANEAGLREKIKKNK 106          
BLAST of EY757322 vs. ExPASy Swiss-Prot
Match: THIO_MYCGE (Thioredoxin OS=Mycoplasma genitalium GN=trxA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.971e-14
Identity = 31/69 (44.93%), Postives = 50/69 (72.46%), Query Frame = 3
Query:  270 MVIDFAASWCGPCKIMEPELRKMASTYSDVQFVKIDVDELSDVAQEFQVQAMPTFVLVKGGKEVERVIG 476
            +++DF A+WCGPCK+  PE +K A  +SD QFVK++VD+ +D+A  + + ++PT V+ + G E +R IG
Sbjct:   21 VIVDFWAAWCGPCKLTSPEFQKAADEFSDAQFVKVNVDDHTDIAAAYNITSLPTIVVFENGVEKKRAIG 89          
The following BLAST results are available for this feature:
BLAST of EY757322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
THIO_ECHGR1.782e-1546.34Thioredoxin OS=Echinococcus granulosus GN=TRX PE=3... [more]
THIO_BOVIN1.782e-1545.45Thioredoxin OS=Bos taurus GN=TXN PE=3 SV=3[more]
THIO_COPCM2.328e-1535.42Thioredoxin OS=Coprinus comatus PE=1 SV=1[more]
THIO_MOUSE3.040e-1541.67Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3[more]
THIO_RABIT3.971e-1537.76Thioredoxin OS=Oryctolagus cuniculus GN=TXN PE=1 S... [more]
THIO_RAT5.186e-1544.16Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2[more]
TRXH_CHLRE6.773e-1535.78Thioredoxin H-type OS=Chlamydomonas reinhardtii GN... [more]
NGLY1_CAEEL6.773e-1534.88Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]
THIO_GEOCY1.155e-1446.51Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1[more]
THIO_MYCGE1.971e-1444.93Thioredoxin OS=Mycoplasma genitalium GN=trxA PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-022-A04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757322 ID=EY757322; Name=EY757322; organism=Citrus sinensis; type=EST; length=783bp
TTCGTCAACCCCGCGTCCGCTCCACTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCATAATCCCCCTTCTATAAACGAATCCATTACTATTGCGTCGTCTC
GGCTTGTTCTTGTTTAAAGATGGGGGGTATTCTTTCAAACATTTTTGGGG
CCGGAGGATCCGACGGCCAAGATTCACCGCACTCAGAATCTGCTACCAAC
GTCATGTCGTTTCACTCGTCCGCCAGATGGCAGCTCCATTTCGATTCCTG
CAAAACTTCTTCCCAATTGATGGTGATAGATTTTGCGGCGTCGTGGTGTG
GGCCCTGCAAGATCATGGAACCGGAACTGCGTAAGATGGCTTCGACCTAC
TCCGATGTCCAGTTCGTCAAGATTGATGTTGATGAGTTGTCTGATGTGGC
GCAAGAGTTTCAGGTGCAGGCAATGCCTACGTTTGTGTTGGTGAAGGGAG
GGAAGGAAGTTGAGAGGGTGATTGGTGCTCGAAAGGATGAGCTTTTGAAG
AAAATTGAGAAACACAGAGCTCAGCAGTGACAGACCAGCCGCCATAAGCC
GACTGATTGCTCGCTCATGGTCTCTCTCTTATATATGTTTCGCTTTGTTG
TATTTTCCATTGGGAAAATTGACTTTGATCAATTCTCATGATGATGATGC
GCTCTCCATCTTTATGTAATAATAAATTCTCTTTCAACGAATCTATCATA
TTATGNATTTCCCTATTTTATCTTCAGGTTCTCCTGCTTAAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGGCCGGCCCTCCTGA
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