EY757238

Overview
NameEY757238
Unique NameEY757238
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY757238 vs. ExPASy Swiss-Prot
Match: GLRX2_YEAST (Glutaredoxin-2, mitochondrial OS=Saccharomyces cerevisiae GN=GRX2 PE=1 SV=3)

HSP 1 Score: 45.4394 bits (106), Expect = 7.011e-11
Identity = 27/80 (33.75%), Postives = 43/80 (53.75%), Query Frame = 1 
Query:   58 RFRIKDKEDTEMALPKAQETVSSNSVVVFSKTLCPFC-VSVKELFQQLGVTFK---AIELDKESDGSDIQSAQREWAGTK 285
            RF    K  ++  +   ++ +    V V +KT CP+C  ++  LFQ+L V       +ELD+ S+GS+IQ A  E +G K
Sbjct:   28 RFLSTPKMVSQETVAHVKDLIGQKEVFVAAKTYCPYCKATLSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQK 107

HSP 2 Score: 42.3578 bits (98), Expect = 7.011e-11
Identity = 19/33 (57.58%), Postives = 22/33 (66.67%), Query Frame = 2 
Query:  281 QKTVPNVFIGGKHIGGCDSTTALHREGKLVPLL 379
            QKTVPNV+I GKHIGG      L + GKL  +L
Sbjct:  106 QKTVPNVYINGKHIGGNSDLETLKKNGKLAEIL 138
The following BLAST results are available for this feature:
BLAST of EY757238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GLRX2_YEAST7.011e-1133.75Glutaredoxin-2, mitochondrial OS=Saccharomyces cer... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-019-A08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757238 ID=EY757238; Name=EY757238; organism=Citrus sinensis; type=EST; length=717bp
CCACGCGTCCGCCGCTTGTATACCCAAAGAGGATTTGAAGCTTATTTAGG
GTTTGTGAGATTTCGAATCAAAGACAAAGAAGACACAGAAATGGCTTTGC
CCAAGGCCCAGGAAACCGTTTCCTCCAATTCCGTCGTCGTTTTCAGCAAA
ACGCTTTGTCCGTTCTGCGTGAGTGTCAAAGAGCTGTTTCAGCAACTCGG
AGTCACTTTCAAGGCCATTGAACTGGACAAAGAAAGTGATGGAAGTGACA
TTCAATCAGCTCAACGTGAGTGGGCTGGAACAAAAAACTGTTCCAAATGT
CTTCATCGGAGGGAAACACATTGGTGGCTGCGATTCAACTACTGCACTGC
ACAGGGAAGGGAAGCTGGTTCCTCTGCTCACTGAAGCTGGAGCTGTTGCC
AAGACAGCTGCCTAAGGGATGGCTATTCTCTGCCTGTTTATGCTAGTAAT
AAATAAACAATGTGTTGGTAGTGCTTAATCTGTCTGAATTAAATATGAAA
TTATGCTTATTTGAGTAATTTCCAATGCACTTTTTTGTTCAGTTTCTGTT
TTATGTTGAAATCTGTATGAATTTTATCAGATTTTCCATCTACTATATCC
ATGTAGAGTCATTTCTGCTGTAAATTATTTCAGTGTCCTTGCTATAGATC
ATTTTTTGTCTTTGGTGAAAANTATNNNTTNNNNNACTATNNNANAAAAA
ATAATNAATAAAAAGGG
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