EY757229

Overview
NameEY757229
Unique NameEY757229
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY757229 vs. ExPASy Swiss-Prot
Match: LH15_EUGGR (Light-harvesting complex I LH35 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13
Identity = 67/173 (38.73%), Postives = 81/173 (46.82%), Query Frame = 2 
Query:   29 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG----EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA 535
            P  + + R  EV + R AML  +GCV+PELL  NGV F   VW K     F                    A+ + QVV    +E +R  GG  G    E  D  YPG  FDP  L  +       K  EIKNGRLAM  MFG  VQ  VT +GP+ NL +HL  P+  N  A
Sbjct:    1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELLG-NGVWF--EVWNKVDFYRF--------------------ALISLQVV--APLEYWRGNGG-FGWDGEEKYDRSYPG--FDPCNLTTE-----YTKAAEIKNGRLAMIGMFGLEVQNHVTAQGPVANLIEHLRHPLAANIGA 140
The following BLAST results are available for this feature:
BLAST of EY757229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
LH15_EUGGR2.414e-1338.73Light-harvesting complex I LH35 proteins (Fragment... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757229 ID=EY757229; Name=EY757229; organism=Citrus sinensis; type=EST; length=707bp
CCACGCGTCCGCCGGGCTTTCACCTGACCCAGAAACCTTTGCCAAGAACC
GTGAACTCGAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCTCTTGGA
TGCGTCTTCCCGGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGAGGC
TGTGTGGTTCAAGGCGGGAGCTCAGATCTTCAGCGAGGGCGGGCTTGACT
ACTTGGGAAACCCAAGCTTGATCCACGCCCAGAGCATCTTGGCCATCTGG
GCTTGCCAGGTGGTCTTGATGGGAGCCGTTGAGGGTTACAGAATTGCTGG
AGGGCCGCTCGGTGAAGTGACTGACCCATTGTACCCAGGTGGCAGCTTTG
ATCCATTGGGTTTGGCTGATGACCCGGAGGCTTTTGCTGAGCTCAAGGTT
AAGGAAATCAAGAATGGAAGGTTGGCTATGTTCTCCATGTTTGGTTTCTT
CGTTCAGGCCATTGTCACCGGCAAGGGACCGTTAGAGAACTTGGCCGACC
ACTTGGCTGACCCTGTCAATAACAATGCCTGGGCCTACGCCACCAACTTT
GTCCCCGGAAAGTGAGCTTCGGTTGATAAGAGTTTTTCTCTTTTCGGTTT
CTTGGATATCATGTAAATCTGTTGTGAGCTCATGGAAGCTTTAATTTGAG
TTGTGATTATTTATAAAATGCTTCAATTTGATCTAAAAAAAAAAAAAAAA
AAAAAAA
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