EY757198

Overview
NameEY757198
Unique NameEY757198
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_NOVAD (Argininosuccinate lyase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=argH PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = 1
Query:   16 FNVERIKKALPAGYLDATTLADYLVNK-QIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRSS 351
            F  +R++ A   GY  AT LAD+LV +  IPFR +H I G AV L  S+   L  LS++++++++   D+ VY  L VE ++    S G T    V +++      LG+  S+
Sbjct:  357 FRTDRMRAAAELGYATATDLADWLVRQANIPFREAHHITGSAVKLAESRGIALDQLSIEDLKAIDERIDERVYAALSVEASVAARCSHGGTAPDEVRKRVAQARVALGLEESA 469          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_MAGSM (Argininosuccinate lyase OS=Magnetococcus sp. (strain MC-1) GN=argH PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 1
Query:   22 VERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACV 300
            V  ++ A  AG+  AT LADYLV KQIPFR +H+IVG  V +   +   L  L+L +++S++   + DV   L VE+++    + G T  A V
Sbjct:  359 VATLRGAAGAGFATATDLADYLVRKQIPFREAHEIVGTIVRMAEQQGVDLDGLTLADLQSVDGRIESDVTAILSVESSVNARQAIGGTAVATV 451          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_CHLPD (Argininosuccinate lyase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=argH PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 1
Query:   13 TFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINR 345
            T  VER++         AT +A+YLV++ +PFR +H I GK V   + +   L  ++L++ R+ +P+FD  +Y+ L  E ++    S GS     V  QL    A++  NR
Sbjct:  354 TLKVERLRSLTSEDLSLATEIAEYLVSRNLPFREAHRITGKIVTFSIGEGITLPRITLEQFRTFSPLFDSAIYDSLKPEASVNSKKSHGSCSFRSVEAQLAEARAQMQENR 464          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_ARCB4 (Argininosuccinate lyase OS=Arcobacter butzleri (strain RM4018) GN=argH PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 1
Query:   19 NVERIKKALPAGYLDATTLADYLVNKQ-IPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPV---FDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 312
            NV++++ A   G+L AT LADYLV KQ +PFRT++ I    VAL  S    + +LS+DE+R  N      ++D+  YL ++N++   +SFG T +     Q+
Sbjct:  355 NVDKMQNACKIGHLTATDLADYLVQKQNMPFRTAYYITKDVVALANSLNKDISELSIDEIRKANDELKNINEDIVLYLDLKNSMNARNSFGGTSTKQTESQI 456          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_ACIAD (Argininosuccinate lyase OS=Acinetobacter sp. (strain ADP1) GN=argH PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 36/90 (40.00%), Postives = 57/90 (63.33%), Query Frame = 1
Query:   19 NVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYE-YLGVENAIRKFSSFGST 285
            N+E +++A   G+  AT LADYLV K + FR +H+IVGKAVAL V +E  L +LSL++++  + +   DV++  L +E ++      G T
Sbjct:  367 NIEIMREAALRGFSTATDLADYLVKKGVAFRDAHEIVGKAVALGVQEEKDLSELSLEQLQQFSDLITADVFDKALTLEASVNARDHIGGT 456          
The following BLAST results are available for this feature:
BLAST of EY757198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 355
Match NameE-valueIdentityDescription
ARLY_NOVAD9.911e-1134.51Argininosuccinate lyase OS=Novosphingobium aromati... [more]
ARLY_MAGSM9.911e-1138.71Argininosuccinate lyase OS=Magnetococcus sp. (stra... [more]
ARLY_CHLPD9.911e-1132.43Argininosuccinate lyase OS=Chlorobium phaeobactero... [more]
ARLY_ARCB49.911e-1138.24Argininosuccinate lyase OS=Arcobacter butzleri (st... [more]
ARLY_ACIAD9.911e-1140.00Argininosuccinate lyase OS=Acinetobacter sp. (stra... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-F01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757198 ID=EY757198; Name=EY757198; organism=Citrus sinensis; type=EST; length=771bp
CCACGCGTCCGTACATTTAATGTGGAGAGAATAAAGAAGGCTTTGCCAGC
TGGTTATCTTGATGCCACAACCCTTGCCGATTATCTTGTGAATAAGCAAA
TACCTTTTAGGACTTCCCATGATATAGTAGGAAAAGCAGTTGCTTTGTGC
GTGTCAAAGGAATGTCAGCTTCAGGATCTGAGTCTTGATGAGATGAGAAG
TCTAAACCCAGTGTTTGATAAGGATGTATACGAATATCTCGGAGTAGAAA
ATGCAATAAGGAAATTCAGCTCATTTGGTTCCACAGGATCGGCATGCGTC
ACTGAACAACTACATTCTTGGGTTGCCAAGCTTGGAATCAACAGAAGTAG
CTGTTAATTTACAAATGGAAGCAGAGATGAGTAAAATGAGATCAAGGAAA
CTGCCTGGAACATGAGTATCATTTTTAAGAACCTGAAGTTGCAGATACTA
AGGATAGGATTTGGTAAACTGGGTAACAAAAATGAAAGTTAATTGCAGTA
CTGAACCGAAAGATTCCATCAGTGAGATTTGAATAATTGCGATGCCATGC
TTGGTTGTAATCAACTGAGCTTATGCCGCTANGATTGGGTACAGCAATTA
GTTTAAGAGTCCTTTAAAAATTGTTTGCAGTGGGATAAAATTTTATTTGT
TCTCCCATTGTGTTGCGTCCTTTGGTTGCTATGCTTATTACAAACAGNTC
TGTTATTGACTAGATCATTCAGTTACCTCTCCAAATCAGAAGTTTTGTTT
AAAAAAAAAAAAAAAAAAAAA
back to top