EY757198

Overview
NameEY757198
Unique NameEY757198
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_NITSB (Argininosuccinate lyase OS=Nitratiruptor sp. (strain SB155-2) GN=argH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14
Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 1
Query:    4 RVRTFNVERIKKALPAGYLDATTLADYLVNK-QIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 312
            +    N E+++ A   G+L AT LADYLV K  IPFR +H I GKAVAL   K+  L +LSL E++S++P    DV +YL +++++   +S+G T    V +Q+
Sbjct:  347 KTMNINKEKMEAATKIGHLTATDLADYLVEKIGIPFREAHFITGKAVALAEQKQKDLSELSLAELQSIDPRIQNDVLQYLDLQHSMNARNSYGGTAKEQVEKQI 450          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_BACC2 (Argininosuccinate lyase OS=Bacillus cereus (strain G9842) GN=argH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14
Identity = 37/92 (40.22%), Postives = 60/92 (65.22%), Query Frame = 1
Query:   13 TFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTG 288
            T N E++ +A+   + +AT +ADYL NK +PFR +H+IVGK V  C  K   L D+ L+  + ++P+F++D+YE L    A+++ +S G TG
Sbjct:  350 TVNKEKMGQAVTQDFSNATEIADYLANKGLPFRQAHEIVGKLVLHCTQKGIYLLDVPLETYKEMSPLFEEDLYEVLSPYEAVKRRNSAGGTG 441          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_SYNPX (Argininosuccinate lyase OS=Synechococcus sp. (strain WH8102) GN=argH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.478e-14
Identity = 36/106 (33.96%), Postives = 66/106 (62.26%), Query Frame = 1
Query:   16 FNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKL 333
            F ++R+ +A+ + + +AT +ADYLV + +PFR ++ +VG  V  C+ ++C L++LSL++ + ++P F+ D++E L     +    S G TG   V EQ+  W  +L
Sbjct:  360 FRIDRLNQAVESDFSNATDVADYLVARGVPFREAYQLVGAVVRRCLEQDCLLRELSLEQWKEIHPAFEADLHEALAPRAVVSARRSEGGTGFDRVHEQVMLWQERL 465          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_SHEPW (Argininosuccinate lyase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=argH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.478e-14
Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 1
Query:   19 NVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGST 285
            N ER   A   GY ++T LADYLV K +PFR +H +VG+AV   ++K+  L+DL L+E++S + + + DVYE L +E+ + K  + G T
Sbjct:  352 NRERTLSAAQQGYANSTELADYLVAKGMPFREAHHVVGEAVVNAIAKQTPLEDLPLEELQSFSAIIEADVYECLTIESCLAKREALGGT 440          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_SHEHH (Argininosuccinate lyase OS=Shewanella halifaxensis (strain HAW-EB4) GN=argH PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14
Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 1
Query:   19 NVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGST 285
            N E+   A   GY ++T LADYLV K +PFR +H +VG+AV   ++K+  L+DL+L+E+++ + V D DVY+ L +E+ + K  + G T
Sbjct:  352 NREKTLSAAKQGYANSTELADYLVAKGMPFREAHHVVGEAVVSAIAKQTPLEDLTLEELQAFSAVIDADVYDCLTIESCLAKREALGGT 440          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_RHIE6 (Argininosuccinate lyase OS=Rhizobium etli (strain CIAT 652) GN=argH PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14
Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 1
Query:    4 RVRTFNVERIKKALPAGYLDATTLADYLVNKQ-IPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAK 330
            R  T N  R+K A  +G+  AT LAD+LV +  +PFR +H + G+AVAL  SK C L +L L ++++++P     VY+ L VE ++    SFG T  + V +Q+  W A+
Sbjct:  357 RDMTVNTARMKAAAGSGFSTATDLADWLVREAGLPFRDAHHVTGRAVALAESKGCDLAELPLADLQAIHPDITDKVYDVLTVEASVASRKSFGGTAPSEVRKQIAFWRAR 466          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_DESRM (Argininosuccinate lyase OS=Desulfotomaculum reducens (strain MI-1) GN=argH PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14
Identity = 35/82 (42.68%), Postives = 55/82 (67.07%), Query Frame = 1
Query:   13 TFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAI 258
            T   E + KA   G+ +AT +ADYL  K +PFR +H++VGKAV  C+ +   L++L+L+E + L+PVF+ D+Y  +GVE  +
Sbjct:  349 TVRQENMAKAARGGFTNATDVADYLAKKGVPFREAHEVVGKAVFYCLQQNKALEELTLEEYKELSPVFEDDIYAAIGVEYCV 430          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLZ_SCHPO (Probable argininosuccinate lyase OS=Schizosaccharomyces pombe GN=argx PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14
Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 1
Query:   13 TFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHS 318
            T N E I K+L A  L AT LA+YLV K +PFR +H I G AV +   +   +  LS+++ +SL+P++++DV +    E+++ K  + G T  +CV EQ+ +
Sbjct:  354 TVNPENIAKSLTADML-ATDLAEYLVRKGVPFRETHHISGSAVRMAEERNTTIDKLSVEDFKSLHPLYEEDVADVFNYESSVEKRCAIGGTAKSCVLEQIQT 454          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_RHOS4 (Argininosuccinate lyase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=argH PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1
Query:   19 NVERIKKALPAGYLDATTLADYLVNK-QIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLG 336
            N E +  A  +G+  AT LAD+LV +  +PFR +H + G  VA   ++ C L DLSL EM+ ++P   +DV+  LGVEN++R  +S+G T    V  Q   W   LG
Sbjct:  362 NRESLAAAAASGFSTATDLADWLVRELNLPFRDAHHVTGTLVARAEARGCDLPDLSLAEMQEVHPGIREDVFAVLGVENSVRSRTSYGGTAPDNVRAQAARWKELLG 468          
BLAST of EY757198 vs. ExPASy Swiss-Prot
Match: ARLY_RHOS1 (Argininosuccinate lyase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=argH PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1
Query:   19 NVERIKKALPAGYLDATTLADYLVNK-QIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLG 336
            N E +  A  +G+  AT LAD+LV +  +PFR +H + G  VA   ++ C L DLSL EM+ ++P   +DV+  LGVEN++R  +S+G T    V  Q   W   LG
Sbjct:  362 NRESLAAAAASGFSTATDLADWLVRELNLPFRDAHHVTGTLVARAEARGCDLPDLSLAEMQEVHPGIREDVFAVLGVENSVRSRTSYGGTAPDNVRAQAARWKELLG 468          
The following BLAST results are available for this feature:
BLAST of EY757198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 355
Match NameE-valueIdentityDescription
ARLY_NITSB1.131e-1441.35Argininosuccinate lyase OS=Nitratiruptor sp. (stra... [more]
ARLY_BACC21.131e-1440.22Argininosuccinate lyase OS=Bacillus cereus (strain... [more]
ARLY_SYNPX1.478e-1433.96Argininosuccinate lyase OS=Synechococcus sp. (stra... [more]
ARLY_SHEPW1.478e-1442.70Argininosuccinate lyase OS=Shewanella piezotoleran... [more]
ARLY_SHEHH1.930e-1441.57Argininosuccinate lyase OS=Shewanella halifaxensis... [more]
ARLY_RHIE61.930e-1439.09Argininosuccinate lyase OS=Rhizobium etli (strain ... [more]
ARLY_DESRM1.930e-1442.68Argininosuccinate lyase OS=Desulfotomaculum reduce... [more]
ARLZ_SCHPO2.520e-1438.24Probable argininosuccinate lyase OS=Schizosaccharo... [more]
ARLY_RHOS42.520e-1440.19Argininosuccinate lyase OS=Rhodobacter sphaeroides... [more]
ARLY_RHOS12.520e-1440.19Argininosuccinate lyase OS=Rhodobacter sphaeroides... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-F01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757198 ID=EY757198; Name=EY757198; organism=Citrus sinensis; type=EST; length=771bp
CCACGCGTCCGTACATTTAATGTGGAGAGAATAAAGAAGGCTTTGCCAGC
TGGTTATCTTGATGCCACAACCCTTGCCGATTATCTTGTGAATAAGCAAA
TACCTTTTAGGACTTCCCATGATATAGTAGGAAAAGCAGTTGCTTTGTGC
GTGTCAAAGGAATGTCAGCTTCAGGATCTGAGTCTTGATGAGATGAGAAG
TCTAAACCCAGTGTTTGATAAGGATGTATACGAATATCTCGGAGTAGAAA
ATGCAATAAGGAAATTCAGCTCATTTGGTTCCACAGGATCGGCATGCGTC
ACTGAACAACTACATTCTTGGGTTGCCAAGCTTGGAATCAACAGAAGTAG
CTGTTAATTTACAAATGGAAGCAGAGATGAGTAAAATGAGATCAAGGAAA
CTGCCTGGAACATGAGTATCATTTTTAAGAACCTGAAGTTGCAGATACTA
AGGATAGGATTTGGTAAACTGGGTAACAAAAATGAAAGTTAATTGCAGTA
CTGAACCGAAAGATTCCATCAGTGAGATTTGAATAATTGCGATGCCATGC
TTGGTTGTAATCAACTGAGCTTATGCCGCTANGATTGGGTACAGCAATTA
GTTTAAGAGTCCTTTAAAAATTGTTTGCAGTGGGATAAAATTTTATTTGT
TCTCCCATTGTGTTGCGTCCTTTGGTTGCTATGCTTATTACAAACAGNTC
TGTTATTGACTAGATCATTCAGTTACCTCTCCAAATCAGAAGTTTTGTTT
AAAAAAAAAAAAAAAAAAAAA
back to top