EY757184

Overview
NameEY757184
Unique NameEY757184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_MAGSA (Serine hydroxymethyltransferase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glyA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55
Identity = 118/246 (47.97%), Postives = 148/246 (60.16%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            ID+ ++EE A   RPKLII GGSAYPR  D+ARFR +AD+ GA  + DMAH +GLVA     NP  + H+VTTTTHK+LRGPR GMI                   D   KIN A+FP +QGGP  H I   AVA  +A  P FK YAKQV  NA AL + L  +G  +V+GGT++HL+L DLRP  LTG   E   +   +T NKN + F         GVR+GTPA T+RG   E+F+ +GE +
Sbjct:  160 IDFAEVEELARTHRPKLIIAGGSAYPRTIDFARFRKIADEVGAFFMVDMAHFAGLVAGGVYPNPLPHAHVVTTTTHKTLRGPRGGMILSNDA--------------DIGKKINSAIFPGIQGGPLMHVIAGKAVAFGEALKPEFKLYAKQVVDNARALADTLVRRGLDIVSGGTDSHLMLVDLRPKKLTGKAAEASLEHAGMTCNKNGIPFDPEKPTITSGVRLGTPAATTRGFGVEEFKKVGELI 391          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_GEOKA (Serine hydroxymethyltransferase OS=Geobacillus kaustophilus GN=glyA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55
Identity = 119/236 (50.42%), Postives = 148/236 (62.71%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRG 726
            T  IDYD + EKA   RPKLI+ G SAYPR  D+A+FR +AD+ GA L+ DMAHI+GLVAA    NP  Y H VTTTTHK+LRGPR GMI  +                 F  +I+ A+FP +QGGP  H I A AVAL +A    FK YAK+V  NA  L   L  +G++L++GGT+NHL+L DLRP  LTG   EK+ D   ITVNKN + +   S     G+RIGT A+T+RG
Sbjct:  147 THVIDYDDVREKARLHRPKLIVAGASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGVHPNPVPYAHFVTTTTHKTLRGPRGGMILCQE---------------QFAKQIDKAIFPGIQGGPLMHVIAAKAVALGEALQDDFKVYAKRVVENAKRLAAALQNEGFTLISGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRG 367          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA2_RHIME (Serine hydroxymethyltransferase 2 OS=Rhizobium meliloti GN=glyA2 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55
Identity = 119/243 (48.97%), Postives = 148/243 (60.91%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIG 756
            IDYD+LE KA+  RPKLII GGSAYPR  D+ R RA+AD  GA ++ DMAH +GLVA     NP E   IVTTTTHK+LRGPR GMI                   D   K+N AVFP LQGGP  H I A AVAL +A    F+ YA+Q+ ANA AL + LT +GY +V+GGT+ HL+L DLR  G++G   E+      +T NKN + F  +      G+R+GTPA TSRG    +F  +G
Sbjct:  154 IDYDELEVKAIATRPKLIITGGSAYPRLIDFKRIRAIADSVGAAMMVDMAHFAGLVAGGVHPNPVEIADIVTTTTHKTLRGPRGGMILTNN--------------QDVAKKVNSAVFPGLQGGPLMHVIAAKAVALGEALEDNFRQYARQMVANARALASALTERGYDIVSGGTDTHLILVDLRSKGVSGKDAEEALGRAGLTCNKNGIPFDPAPPAVTSGIRLGTPAATSRGFREAEFNEVG 382          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_GLOVI (Serine hydroxymethyltransferase OS=Gloeobacter violaceus GN=gylA PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.844e-55
Identity = 124/251 (49.40%), Postives = 155/251 (61.75%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVT 780
            ID+D++ E A   RPKLIICG SAYPR  D+  FR +AD+ GA LL D+AHI+GLV A    NP  +C +VTTTTHK+LRGPR G+I  R           + A+    DK   AVFP  QGGP  H I A AVA  +A  P FK YA  V ANA AL   LT +G +LV+GGT+NHL+L DLR + LTG + + L    NIT NKN + F   S     G+R+G+PAMT+RGL   +F  IGE +   +T
Sbjct:  154 IDFDQVRELAHAHRPKLIICGYSAYPRVIDFECFREIADEVGAYLLADIAHIAGLVVAGVHPNPIPHCDVVTTTTHKTLRGPRGGLILTR-----------DEALGKRFDK---AVFPGTQGGPLEHVIAAKAVAFGEALQPEFKTYAADVVANARALAERLTARGLTLVSGGTDNHLMLVDLRSVDLTGKQADLLMSDVNITTNKNTIPFDPQSPFVTSGLRLGSPAMTTRGLGTTEFGEIGEIIANRLT 390          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAD (Serine hydroxymethyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=glyA PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.844e-55
Identity = 118/237 (49.79%), Postives = 149/237 (62.87%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGL 729
            TG IDYD L  KA   RPKLI  G SAYPR  D+AR R +AD+ GALL+ D+AHI+GLVA  E  +P  + HI+TTTTHK+LRGPR G+I                   +F  +IN +VFP  QGGP  H I   AVA  +A  P FK YA Q++ NA AL   L  +G +LV+GGT+NHL+L DLR  GLTG + ++  D   ITVNKNA+  D    +   G+RIGTPA+T+RG+
Sbjct:  148 TGQIDYDDLAAKARAIRPKLITSGASAYPRLIDFARMRQIADEVGALLMADIAHIAGLVATGEHPSPVGHAHIITTTTHKTLRGPRGGLILMGE---------------EFAKQINSSVFPGTQGGPLMHVIAGKAVAFGEALRPEFKQYAAQIRRNAKALAEGLHAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAIPDDPQPPMKTSGIRIGTPAVTTRGM 369          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_SYNS9 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain CC9902) GN=glyA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.715e-55
Identity = 115/250 (46.00%), Postives = 157/250 (62.80%), Query Frame = 1
Query:   19 STGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            +T  +D + + + AL+ +PKLI+CG SAYPR  D+A FR++AD+ GA LL DMAHI+GLVAA    +P  +C +VTTTTHK+LRGPR G+I  R                +F  K + AVFP  QGGP  H I A AVA  +A  P+FK Y++QV ANA AL   L  +G ++V+GGT+NH+VL DLR +G+TG   + L    +IT NKN V F   S     G+R+GT A+T+RG   + FR + + +
Sbjct:  155 TTQRLDMEAIRKLALEHKPKLIVCGYSAYPRTIDFAAFRSIADEVGAFLLADMAHIAGLVAAGVHPSPVPHCDVVTTTTHKTLRGPRGGLILCRDA--------------EFAKKFDKAVFPGTQGGPLEHVIAAKAVAFGEALQPSFKTYSQQVVANAGALAEQLISRGINVVSGGTDNHVVLLDLRSIGMTGKVADLLVSDVHITANKNTVPFDPESPFVTSGLRLGTAALTTRGFDVDAFREVADVI 390          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_BACHD (Serine hydroxymethyltransferase OS=Bacillus halodurans GN=glyA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.715e-55
Identity = 120/252 (47.62%), Postives = 155/252 (61.51%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVTL 783
            IDY+++   A + +PK+I+ G SAYPR+ D+A+FR +AD+ GA L+ DMAHI+GLVAA    NP  + H VTTTTHK+LRGPR GMI                   +F  +I+ ++FP +QGGP  H I A AVA  +A  P FK+Y + +  NA  LG  LT +G  LV+GGT+NHL+L DLR LGLTG   EK  D   IT NKN + F   S     G+RIGT A+TSRGL  E    IG  +  A+TL
Sbjct:  150 IDYEEVRRLAKEHQPKMIVAGASAYPREIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHQNPVPHSHFVTTTTHKTLRGPRGGMIICNE---------------EFAKQIDKSIFPGIQGGPLMHVIAAKAVAFGEALQPEFKSYGEAIIRNAKRLGEKLTSEGIDLVSGGTDNHLLLLDLRSLGLTGKVAEKALDDVGITTNKNTIPFDPESPFVTSGIRIGTAAVTSRGLDEEAMDEIGATI--ALTL 384          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_SYNAS (Serine hydroxymethyltransferase OS=Syntrophus aciditrophicus (strain SB) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.852e-55
Identity = 112/249 (44.98%), Postives = 154/249 (61.85%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            T  IDY+++E+ AL  +P++I+ G SAYPR  D+ +FRA+ADK GAL++ D+AHI+GLVA     +P   C  VT+TTHK+LRGPR G++  +                 ++  ++  VFP +QGGP  H I A AVA K+A T  FK Y  Q+  NA AL   L G+GY LV+GGT+NHL+L DL   GLTG + ++  D   ITVNKN + F     +   G+RIGTPA+TSRG+  E+ R I   +
Sbjct:  147 TETIDYNQVEDLALQHKPRMIVVGASAYPRTIDFEKFRAIADKVGALVMADIAHIAGLVATGLHPSPVPVCEYVTSTTHKTLRGPRGGLVMCQA---------------SYQKTLSSRVFPGVQGGPLMHIIAAKAVAFKEALTDEFKDYQSQIVKNAQALAKELIGRGYRLVSGGTDNHLLLMDLTDKGLTGKEAQESLDSAGITVNKNGIPFDTRGPMVTSGIRIGTPALTSRGMKEEEMRTIARLI 380          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_MOOTA (Serine hydroxymethyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.852e-55
Identity = 116/240 (48.33%), Postives = 151/240 (62.92%), Query Frame = 1
Query:   13 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGL 729
            ++ TG IDYD +   A + RP+LI+ G SAYPR  D+ARFR +AD+ GALL+ DMAHI+GLVAA    NP  Y H VTTTTHK++RGPR G+I                   ++   I+ AVFP +QGGP  H I A AVALK+A  P FK Y +Q+  NA  L + L G G++LV+GGT+NHL+L DLR   +TG + E +     ITVNKNA+ F         G+R+GT A+TSRG+
Sbjct:  146 DAKTGRIDYDAVARIAREERPRLIVAGASAYPRVIDFARFREIADEVGALLMVDMAHIAGLVAAGIHPNPVPYAHFVTTTTHKTMRGPRGGIIL---------------TTREYARDIDKAVFPGVQGGPLMHVIAAKAVALKEAMLPEFKRYQEQIVTNARTLADALMGYGFNLVSGGTDNHLMLVDLRNKNITGREAEDILASVQITVNKNAIPFDPQKPSVTSGIRLGTAALTSRGM 370          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_BACSU (Serine hydroxymethyltransferase OS=Bacillus subtilis GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.852e-55
Identity = 118/256 (46.09%), Postives = 152/256 (59.38%), Query Frame = 1
Query:   13 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAV 777
            +  T YIDYD + EKAL  +PKLI+ G SAYPR  D+ +FR +AD+ GA  + DMAHI+GLVAA    NP  Y   VTTTTHK+LRGPR GMI  R                +F  KI+ ++FP +QGGP  H I A AV+  +     FK YA+ V +NA  L   LT +G  LV+GGT+NHL+L DLR LGLTG   E + D   IT NKNA+ +         G+R+GT A+TSRG  G+    +G  +  A+
Sbjct:  144 DKETQYIDYDDVREKALAHKPKLIVAGASAYPRTIDFKKFREIADEVGAYFMVDMAHIAGLVAAGLHPNPVPYADFVTTTTHKTLRGPRGGMILCRE---------------EFGKKIDKSIFPGIQGGPLMHVIAAKAVSFGEVLQDDFKTYAQNVISNAKRLAEALTKEGIQLVSGGTDNHLILVDLRSLGLTGKVAEHVLDEIGITSNKNAIPYDPEKPFVTSGIRLGTAAVTSRGFDGDALEEVGAIIALAL 384          
The following BLAST results are available for this feature:
BLAST of EY757184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_MAGSA2.178e-5547.97Serine hydroxymethyltransferase OS=Magnetospirillu... [more]
GLYA_GEOKA2.178e-5550.42Serine hydroxymethyltransferase OS=Geobacillus kau... [more]
GLYA2_RHIME2.178e-5548.97Serine hydroxymethyltransferase 2 OS=Rhizobium mel... [more]
GLYA_GLOVI2.844e-5549.40Serine hydroxymethyltransferase OS=Gloeobacter vio... [more]
GLYA_CHLAD2.844e-5549.79Serine hydroxymethyltransferase OS=Chloroflexus ag... [more]
GLYA_SYNS93.715e-5546.00Serine hydroxymethyltransferase OS=Synechococcus s... [more]
GLYA_BACHD3.715e-5547.62Serine hydroxymethyltransferase OS=Bacillus halodu... [more]
GLYA_SYNAS4.852e-5544.98Serine hydroxymethyltransferase OS=Syntrophus acid... [more]
GLYA_MOOTA4.852e-5548.33Serine hydroxymethyltransferase OS=Moorella thermo... [more]
GLYA_BACSU4.852e-5546.09Serine hydroxymethyltransferase OS=Bacillus subtil... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757184 ID=EY757184; Name=EY757184; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGAATTCGAGTACTGGGTATATTGATTACGATAAGTTGGA
GGAGAAGGCGTTGGATTTTAGGCCGAAGTTGATCATTTGCGGTGGGAGTG
CGTATCCGAGGGACTGGGATTATGCTAGATTCAGAGCTGTTGCTGATAAG
TGTGGTGCCCTTTTGCTCTGTGATATGGCTCATATCAGTGGCCTTGTTGC
TGCTCAGGAAGCTGCAAACCCCTTTGAGTACTGTCACATAGTCACAACCA
CTACTCACAAGAGCTTGCGGGGTCCTAGGGCTGGTATGATCTTCTACCGG
AAGGGTCCTAAACCACCCAAGAAGGGCCAGCCAGAGGGTGCGGTTTATGA
CTTTGAAGACAAGATCAACTTTGCTGTCTTCCCATCCCTTCAAGGTGGTC
CTCACAACCACCAGATTGGTGCTCTAGCTGTTGCCCTGAAACAGGCCTCG
ACCCCTGCATTCAAGGCCTATGCGAAACAAGTCAAGGCCAATGCAGTTGC
ACTTGGGAACTACCTGACGGGCAAGGGATACAGCCTTGTCACTGGTGGAA
CTGAGAACCACCTTGTTCTCTGGGATCTACGCCCTCTTGGATTGACTGGC
AATAAGGTTGAGAAGCTCTGTGACCTTTGCAACATTACTGTGAACAAGAA
TGCTGTGTTTGGTGACAGCAGTGCCTTGGCCCCTGGAGGAGTAAGAATCG
GTACTCCTGCCATGACTTCCAGAGGTTTGTTGGGAGAAGACTTTCGAGCA
ATTGGAGAGNTTCTTCACCGCGCTGTGACCCTCACGTTGGAAATTCAAAG
GAGTATGGAAAGCTCTTGAGGACTTCANCAGGGTCTGGTGAACACAGGAC
TCGAGGCCCTCAGGGCTGATGTGAGAAGTCGCCACTCA
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