EY757184

Overview
NameEY757184
Unique NameEY757184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA2_BURTA (Serine hydroxymethyltransferase 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=glyA2 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.782e-57
Identity = 122/249 (49.00%), Postives = 152/249 (61.04%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            T  IDYD++EE A   +P LII G SAYPR  D+ARFRA+AD  GA L+ DMAHI+G++AA   ANP E+ H+VT+TTHK+LRGPR G +                   +   KIN AVFP LQGGP  H I   AVA  +A T  FK Y  +V ANA ALG+ L   G  LVTGGT+NHL+L DLRP GL G +VE+  +   IT NKN + F         G+R+GTPA T+RG    +FR +G  +
Sbjct:  155 TMLIDYDQVEELAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDE--------------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERSGITCNKNGIPFDAEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLI 389          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_SYNY3 (Serine hydroxymethyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glyA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.039e-57
Identity = 115/249 (46.18%), Postives = 159/249 (63.86%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            TG +DYDK+ ++AL+ +PKL+ICG SAYPR  ++ +FRA+AD+ GA L+ D+AHI+GLVA+    +P  YC +VTTTTHK+LRGPR G+I                   +   K + +VFP  QGGP  H I A AVA  +A  P FK Y+ QV ANA A+ + L  +G+ LV+GGT+NHL+L DLR + +TG   ++L    NIT NKN V F   S     G+R+G+PAMT+RG+  ++FR I   +
Sbjct:  152 TGRLDYDKIRQQALEVKPKLLICGYSAYPRQIEFDKFRAIADEVGAYLMADIAHIAGLVASGHHPSPLPYCDVVTTTTHKTLRGPRGGLIMTNNE--------------ELGKKFDKSVFPGTQGGPLEHVITAKAVAFGEALKPEFKVYSGQVIANAQAMADQLQKRGFDLVSGGTDNHLMLVDLRSIAMTGKVGDQLLGEINITANKNTVPFDPESPFVTSGLRLGSPAMTTRGMQEDEFRTIANII 386          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_LYSSC (Serine hydroxymethyltransferase OS=Lysinibacillus sphaericus (strain C3-41) GN=glyA PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.969e-57
Identity = 115/246 (46.75%), Postives = 154/246 (62.60%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIG 756
            T  IDY+ + +KAL+ +PKLI+ G SAYPR+ D+++FR +AD+ GA  + DMAHI+GLVA  E  +P  Y   VT+TTHK+LRGPR G+I                A  ++E K+N +VFP +QGGP  H I A AVA  +   P FK YAKQ+K NA AL   L  +G  +V+GGT+NHL+L +++ LGLTG   E   D   IT NKN + +   S     G+RIGTPA+TSRG   ED + +G
Sbjct:  149 TQVIDYEDVRQKALEHKPKLIVAGASAYPREIDFSKFREIADEVGAYFMVDMAHIAGLVAVGEHQSPVPYADFVTSTTHKTLRGPRGGLIL---------------ASKEWEQKLNKSVFPGIQGGPLMHVIAAKAVAFGEVLQPEFKDYAKQIKLNAKALAEVLIAEGVEIVSGGTDNHLLLLNVKSLGLTGKVAEHALDEVGITTNKNTIPYDTESPFVTSGIRIGTPAVTSRGFKEEDMKEVG 379          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_BRASB (Serine hydroxymethyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=glyA PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.969e-57
Identity = 124/278 (44.60%), Postives = 161/278 (57.91%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVTLTLEIQRSMESS*GLXQGLVNTGLEAL 861
            ID D + ++A + +PKLII GGSAY R WD+ RFR +AD  GA LL DMAH +GLVA    A+P  + HIVTTTTHKSLRGPR G+I +                  F  K+N A+FP LQGGP  H I A AVA  +A  P FK YAK +  NA AL   L  +G+ +V+GGT+NHL+L DLRP GL GN  EK      IT NKN + F         G+R+GTPA T+RG    +F+ +G  +   +     I ++ + S  L +  V   ++AL
Sbjct:  166 IDMDAVAKQAEEVKPKLIIAGGSAYSRPWDFKRFREIADHVGAYLLVDMAHFAGLVAGGAHASPVPHAHIVTTTTHKSLRGPRGGLILWNDE--------------QFTKKLNSAIFPGLQGGPLMHVIAAKAVAFAEALRPEFKTYAKNIVENAKALAESLRAQGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGSLIAEVLN---AIAQAPDGSAPLVEAAVKAKVKAL 426          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_HYPME (Serine hydroxymethyltransferase OS=Hyphomicrobium methylovorum GN=glyA PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.184e-57
Identity = 119/246 (48.37%), Postives = 151/246 (61.38%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            ID D++ + A + +P++II GGSAYPR  D+A FRA+AD+ GA+ L DMAH +GLVAA    +PF + H+VTTTTHK+LRGPR GMI                   D   KIN A+FP +QGGP  H I   AVA  +A  P FK Y KQV  NA ALG  L   G++LV+GGT+ HLVL DLRP  LTG K EK     NIT NKN + F     +   G+R+G+PA T+RG    +F+ IG  +
Sbjct:  166 IDMDEVRKLAQEHKPRIIIAGGSAYPRKIDFAAFRAIADEVGAIFLVDMAHFAGLVAAGLIPSPFPHAHVVTTTTHKTLRGPRGGMILTNDA--------------DIAKKINSAIFPGIQGGPLMHVIAGKAVAFGEALRPDFKVYIKQVMDNARALGEVLVQNGFALVSGGTDTHLVLVDLRPKKLTGTKAEKALGRANITCNKNGIPFDPEKPMVTSGIRLGSPAGTTRGFGVAEFQEIGRLI 397          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA2_BURPS (Serine hydroxymethyltransferase 2 OS=Burkholderia pseudomallei GN=glyA2 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 5.184e-57
Identity = 121/249 (48.59%), Postives = 151/249 (60.64%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            T  IDYD++E  A   +P LII G SAYPR  D+ARFRA+AD  GA L+ DMAHI+G++AA   ANP E+ H+VT+TTHK+LRGPR G +                   +   KIN AVFP LQGGP  H I   AVA  +A T  FK Y  +V ANA ALG+ L   G  LVTGGT+NHL+L DLRP GL G +VE+  +   IT NKN + F         G+R+GTPA T+RG    +FR +G  +
Sbjct:  155 TMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDE--------------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLI 389          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA2_BURP1 (Serine hydroxymethyltransferase 2 OS=Burkholderia pseudomallei (strain 1710b) GN=glyA2 PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.184e-57
Identity = 121/249 (48.59%), Postives = 151/249 (60.64%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            T  IDYD++E  A   +P LII G SAYPR  D+ARFRA+AD  GA L+ DMAHI+G++AA   ANP E+ H+VT+TTHK+LRGPR G +                   +   KIN AVFP LQGGP  H I   AVA  +A T  FK Y  +V ANA ALG+ L   G  LVTGGT+NHL+L DLRP GL G +VE+  +   IT NKN + F         G+R+GTPA T+RG    +FR +G  +
Sbjct:  155 TMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDE--------------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLI 389          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA2_PHOPR (Serine hydroxymethyltransferase 2 OS=Photobacterium profundum GN=glyA2 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.770e-57
Identity = 117/252 (46.43%), Postives = 153/252 (60.71%), Query Frame = 1
Query:   13 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            N  T  IDY+++ E A++ +PK+II GGSA PR  ++A+FR +AD+ GA L+ DMAHI+GL+AA E  +P  + H++TTTTHK+LRGPR GMI                 + D   KIN AVFP LQGGP  H I   AVA  +A  P FK Y K V +NA  L   L  +G  +VT GT+ HL+L DLRP GL GN  E   +   IT NKN + F     +   G+R+GTPA TSRG   ++F+ IGE +
Sbjct:  158 NKDTLEIDYNQVRELAIEHKPKMIIAGGSAIPRIINFAKFREIADEVGAFLMVDMAHIAGLIAAGEHPSPIPHAHVITTTTHKTLRGPRGGMILTN--------------LEDINKKINSAVFPGLQGGPLMHVIAGKAVAFGEALEPDFKIYIKNVISNAKVLAEVLQNRGCDIVTNGTDTHLMLVDLRPKGLKGNAAENALERAGITCNKNGIPFDTEKPMVTSGIRLGTPAGTSRGFGNDEFKQIGEWI 395          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_BRASO (Serine hydroxymethyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=glyA PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.842e-57
Identity = 125/278 (44.96%), Postives = 159/278 (57.19%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVTLTLEIQRSMESS*GLXQGLVNTGLEAL 861
            ID D + ++A + +PKLII GGSAY R WD+ RFR +AD  GA LL DMAH +GLVA    A+P  Y HI TTTTHKSLRGPR G++ +                  F  K N A+FP LQGGP  H I A AVA  +A  P FKAYAK V  NA AL   L  +G+ +V+GGT+NHL+L DLRP GL GN  EK      IT NKN + F         G+R+GTPA T+RG    +F+ +G  +   +     I +  + S  L +  V   ++AL
Sbjct:  165 IDMDAVAKQAEEVKPKLIIAGGSAYSRPWDFKRFREIADSVGAYLLVDMAHFAGLVAGGVHASPVPYAHITTTTTHKSLRGPRGGLMLWNDE--------------QFTKKFNSAIFPGLQGGPLMHVIAAKAVAFAEALRPEFKAYAKNVVENAKALAESLRAQGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAAITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGSLIAEVLN---AIAQGPDGSAPLVEAAVKEKVKAL 425          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA2_RALEJ (Serine hydroxymethyltransferase 2 OS=Ralstonia eutropha (strain JMP134) GN=glyA2 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.842e-57
Identity = 120/252 (47.62%), Postives = 151/252 (59.92%), Query Frame = 1
Query:   13 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            N  +  IDYD++E  A + +P LII G SAYPR  D+ARFRA+AD  GA L+ DMAHI+G++AA   +NP +Y H+VT+TTHK+LRGPR G +                   +   KIN AVFP LQGGP  H I A AVA  +A T  F+ Y   V ANA ALG  L   G  LVTGGT+NHL+L DLRP GL G +VE+  +   IT NKN + F         G+R+G PA T+RG    +FR IG  +
Sbjct:  152 NRESMLIDYDQVEALAKEHKPSLIIAGFSAYPRQLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHSNPVDYAHVVTSTTHKTLRGPRGGFVLTNHE--------------EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEAMTSDFRTYIDNVLANAKALGEVLKEGGVDLVTGGTDNHLLLVDLRPKGLKGTQVEQALERAGITCNKNGIPFDTEKPTITSGIRLGAPAATTRGFGVAEFREIGRLI 389          
The following BLAST results are available for this feature:
BLAST of EY757184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA2_BURTA1.782e-5749.00Serine hydroxymethyltransferase 2 OS=Burkholderia ... [more]
GLYA_SYNY33.039e-5746.18Serine hydroxymethyltransferase OS=Synechocystis s... [more]
GLYA_LYSSC3.969e-5746.75Serine hydroxymethyltransferase OS=Lysinibacillus ... [more]
GLYA_BRASB3.969e-5744.60Serine hydroxymethyltransferase OS=Bradyrhizobium ... [more]
GLYA_HYPME5.184e-5748.37Serine hydroxymethyltransferase OS=Hyphomicrobium ... [more]
GLYA2_BURPS5.184e-5748.59Serine hydroxymethyltransferase 2 OS=Burkholderia ... [more]
GLYA2_BURP15.184e-5748.59Serine hydroxymethyltransferase 2 OS=Burkholderia ... [more]
GLYA2_PHOPR6.770e-5746.43Serine hydroxymethyltransferase 2 OS=Photobacteriu... [more]
GLYA_BRASO8.842e-5744.96Serine hydroxymethyltransferase OS=Bradyrhizobium ... [more]
GLYA2_RALEJ8.842e-5747.62Serine hydroxymethyltransferase 2 OS=Ralstonia eut... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757184 ID=EY757184; Name=EY757184; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGAATTCGAGTACTGGGTATATTGATTACGATAAGTTGGA
GGAGAAGGCGTTGGATTTTAGGCCGAAGTTGATCATTTGCGGTGGGAGTG
CGTATCCGAGGGACTGGGATTATGCTAGATTCAGAGCTGTTGCTGATAAG
TGTGGTGCCCTTTTGCTCTGTGATATGGCTCATATCAGTGGCCTTGTTGC
TGCTCAGGAAGCTGCAAACCCCTTTGAGTACTGTCACATAGTCACAACCA
CTACTCACAAGAGCTTGCGGGGTCCTAGGGCTGGTATGATCTTCTACCGG
AAGGGTCCTAAACCACCCAAGAAGGGCCAGCCAGAGGGTGCGGTTTATGA
CTTTGAAGACAAGATCAACTTTGCTGTCTTCCCATCCCTTCAAGGTGGTC
CTCACAACCACCAGATTGGTGCTCTAGCTGTTGCCCTGAAACAGGCCTCG
ACCCCTGCATTCAAGGCCTATGCGAAACAAGTCAAGGCCAATGCAGTTGC
ACTTGGGAACTACCTGACGGGCAAGGGATACAGCCTTGTCACTGGTGGAA
CTGAGAACCACCTTGTTCTCTGGGATCTACGCCCTCTTGGATTGACTGGC
AATAAGGTTGAGAAGCTCTGTGACCTTTGCAACATTACTGTGAACAAGAA
TGCTGTGTTTGGTGACAGCAGTGCCTTGGCCCCTGGAGGAGTAAGAATCG
GTACTCCTGCCATGACTTCCAGAGGTTTGTTGGGAGAAGACTTTCGAGCA
ATTGGAGAGNTTCTTCACCGCGCTGTGACCCTCACGTTGGAAATTCAAAG
GAGTATGGAAAGCTCTTGAGGACTTCANCAGGGTCTGGTGAACACAGGAC
TCGAGGCCCTCAGGGCTGATGTGAGAAGTCGCCACTCA
back to top