EY757184

Overview
NameEY757184
Unique NameEY757184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_NATTJ (Serine hydroxymethyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glyA PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.388e-56
Identity = 118/264 (44.70%), Postives = 166/264 (62.88%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVTLTLEIQRSME 810
            TG ID+DK+ E A + +PK+I+ G SAYPR  D+A FR +AD+ GA L+ DMAHI+GLVAA    NP  Y   VTTTTHK+LRGPR G++  +                +++ +I+ A+FP LQGGP  H I + AV+ ++A +  FK Y KQV  NA  L + L   GY LV GG++NHL+L DL+  G+TG K E++ D  +ITVNKNAV  D        G+R+GTPA+T+RG   ++ + + + L + +T  LE Q ++E
Sbjct:  147 TGKIDFDKVRELAKEHKPKMIVAGASAYPRIIDFATFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYADFVTTTTHKTLRGPRGGVVLCKE---------------EYKKEIDKAMFPGLQGGPLMHVIASKAVSFQEALSSEFKNYQKQVIKNASVLADELNNLGYDLVAGGSDNHLMLVDLQKKGVTGKKAERVLDDVHITVNKNAVPNDPEGPFVTSGLRLGTPAVTTRGFAEDEIKEVAQLLDKVIT-GLEDQENLE 394          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPH (Serine hydroxymethyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glyA PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.388e-56
Identity = 114/252 (45.24%), Postives = 158/252 (62.70%), Query Frame = 1
Query:   25 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAV 777
            G+IDY+++E+ A + +PKLI+ G SAY R  D+ RFR +AD  GA L+ DMAHI+GLVAA    +P  Y H+ TTTTHK+LRGPR GMI                  +  E K+N ++FP  QGGP  H I A A+  K+A   +FK YA ++ +NA AL N LT +G++LV+GGT+NHL+L DL+ + +TG + E + D  NIT NKN V  D +S     G+R+GTPA+T+RG   +D   + E +   V
Sbjct:  150 GFIDYEEVEKIAKECKPKLIVAGASAYARKIDFKRFREIADLVGAYLMVDMAHIAGLVAAGYHQSPIPYAHVTTTTTHKTLRGPRGGMIL-------------SSEEFAEEHKLNKSIFPGTQGGPLMHVIAAKAICFKEALDDSFKDYAGKIISNAGALANELTARGFNLVSGGTDNHLMLIDLQNMNITGKEAEHILDEANITCNKNTVPNDPASPFVTSGIRLGTPAITTRGFNEKDMAVVAEAISLVV 388          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_BACV8 (Serine hydroxymethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=glyA PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.388e-56
Identity = 119/260 (45.77%), Postives = 158/260 (60.77%), Query Frame = 1
Query:   13 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFY-RXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL--GLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVT 780
            N  TG +DYD++EE AL  +PK+II GGSAY R+WDY R R +ADK GA+L+ DMAH +GL+AA    NP +Y HIVT+TTHK+LRGPR G+I   +           +G +      ++ AVFP +QGGP  H I A AVA  +   P +K Y  QVK NA  L   L  +G+++V+GGT+NH +L DLR     LTG   EK     +ITVNKN V F   SA    G+R+GTPA+T+RG   +    I E +   ++
Sbjct:  140 NKETGRVDYDQMEEIALREKPKMIIGGGSAYSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIMMGKDFPNPWGKKTPKGEIKMMSQLLDSAVFPGIQGGPLEHVIAAKAVAFGECLQPEYKEYQTQVKKNAAVLAQALIDRGFTIVSGGTDNHSMLVDLRTKYPDLTGKVAEKALVAADITVNKNMVPFDSRSAFQTSGIRLGTPAITTRGAKEDLMLEIAEMIETVLS 399          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEAE (Serine hydroxymethyltransferase 1 OS=Pseudomonas aeruginosa GN=glyA1 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.388e-56
Identity = 118/240 (49.17%), Postives = 151/240 (62.92%), Query Frame = 1
Query:   13 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGL 729
            +++TG IDYD++E  A++ +PK+I+ G SAY +  D+ RFRA+ADK GALL  DMAH++GLVAA    NP  +  +VTTTTHK+LRGPR G+I  R             A  + E K+N AVFP  QGGP  H I A AV  K+A  P FK Y  QV  NA A+     G+GY +V+GGT+NHL+L  L   GLTG + +       ITVNKNAV  D  S     G+RIGTPA+T+RGL
Sbjct:  148 DTATGLIDYDEVERLAVEHKPKMIVAGFSAYSKTLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLILAR-------------ANEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKDYQAQVIRNAKAMAEVFIGRGYDVVSGGTDNHLMLISLVRQGLTGKEADAALGRVGITVNKNAVPNDPQSPFVTSGIRIGTPAITTRGL 374          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_WOLSU (Serine hydroxymethyltransferase OS=Wolinella succinogenes GN=glyA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56
Identity = 117/244 (47.95%), Postives = 153/244 (62.70%), Query Frame = 1
Query:   25 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLGEDFRAI 753
            GYI+YDK+EE A   +P++I+CG SAY R+ D+ RFR +AD  GALLL D+AH++GL+ A E  NPF +CHIVTTTTHK+LRGPR GMI                   +   KI+ AVFP +QGGP  H I A AV   +   P +K YAKQVKANA  L   L  +GY+LV+GGT+NHL+L  L     +G   ++      ITVNKN V G++ S     GVRIG+ A+T+RG+  ++F  I
Sbjct:  148 GYINYDKVEEIAKIVKPQMIVCGFSAYARELDFKRFREIADSVGALLLGDVAHVAGLIVAGEYPNPFPHCHIVTTTTHKTLRGPRGGMILTNDE--------------EIAKKIDKAVFPGMQGGPLMHVIAAKAVGFGENLKPEWKEYAKQVKANAKVLAKVLMARGYTLVSGGTDNHLILVSLLDKEFSGKDADRALGEAGITVNKNTVPGETRSPFVTSGVRIGSAALTARGMREKEFEFI 377          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_MARMS (Serine hydroxymethyltransferase OS=Marinomonas sp. (strain MWYL1) GN=glyA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56
Identity = 118/246 (47.97%), Postives = 146/246 (59.35%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            IDYD +E +AL+ +PK+II GGSA PR  D+ RFR +ADK GA L  DMAHI+GLVA     +P  + H+VTTTTHK+LRGPR GMI                   D   KIN AVFP  QGGP  H I   AVA  +A  P F  Y KQV ANA AL   +  +G  +VTGGT+ HL+L DLRP GL GN  +   +   IT NKN + F     +   G+R+GTPA TSRG   E+F+ +G  +
Sbjct:  158 IDYDAIEAQALECKPKMIIAGGSAIPRQIDFKRFREIADKVGAYLFVDMAHIAGLVATGVHPSPLPHAHVVTTTTHKTLRGPRGGMILSND--------------LDLGKKINSAVFPGYQGGPLMHVIAGKAVAFGEALKPEFTDYIKQVVANAKALAEVMVERGCDIVTGGTDTHLMLVDLRPKGLKGNAADAALERAGITCNKNGIPFDTEKPMVTSGIRLGTPAATSRGFGIEEFQKVGHLI 389          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_GLUOX (Serine hydroxymethyltransferase OS=Gluconobacter oxydans GN=glyA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56
Identity = 117/257 (45.53%), Postives = 154/257 (59.92%), Query Frame = 1
Query:   25 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVTLTLE 792
            G IDYD++E  A + +PK+I+ G SAYPR  D+ARFR +AD+ GA L+ DMAH +GLVAA    NP     I T+TTHK+LRGPR G+I                   D   K+N AVFP LQGGP  H I   AVA  +A +  FKAY K+V ANA AL + L  +G+ +VTGGT++HL+L DLRP  +TG   E + +   IT NKNA+ F         G+R+G+PA T+RG    +FR +G  +   +T  LE
Sbjct:  162 GLIDYDQMEALAREHKPKIIVAGSSAYPRVIDFARFRKIADEVGAYLMVDMAHFAGLVAAGLYPNPVPMADITTSTTHKTLRGPRGGIILTNNP--------------DLAKKVNSAVFPGLQGGPLMHVIAGKAVAFGEALSDEFKAYQKRVLANARALADELQNRGFDIVTGGTDSHLILVDLRPKKVTGKLAEAILERAGITANKNAIPFDPEKPFVTSGIRLGSPAATARGFGEAEFREVGRMIDEVLTAALE 404          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56
Identity = 123/258 (47.67%), Postives = 157/258 (60.85%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVTLTLE 792
            TG IDYD++   A + RPKLI+ G SAYPR+ D+AR RA+AD  GALL+ DMAHI+GL+AA    +P  Y  +VTTTTHK+LRGPR GMI                   ++   I+ AVFP +QGGP  H I A AVAL +A  P FK Y +Q+  NA AL   L  +G+ LV GGT+ HL+L DLR  GLTG   E L D  ++TVNKN V F         G+RIGTPA+T+RG+  +    I E     ++LTL+
Sbjct:  150 TGRIDYDRMHAIAREHRPKLIVGGASAYPRELDFARMRAIADDVGALLMIDMAHIAGLIAAGLHMSPVPYADVVTTTTHKTLRGPRGGMIL---------------CPEEYAAAIDKAVFPGIQGGPLMHVIAAKAVALGEAQRPEFKTYQEQIVKNARALAQALQERGFELVAGGTDTHLILVDLRNKGLTGAVAEDLLDRVDVTVNKNMVPFDPQPPRVTSGIRIGTPAVTTRGMKEDSMVQIAE----VISLTLD 388          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_CHLSY (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56
Identity = 117/240 (48.75%), Postives = 152/240 (63.33%), Query Frame = 1
Query:   13 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGL 729
            ++ TG IDYD L  KA   RPKLI  G SAYPR  D+AR R +AD+ GALL+ D+AHI+GLVAA E  +P  + H++TTTTHK+LRGPR G+I                   DF  ++N +VFP  QGGP  H I   AVA  +A  P F+ YA Q++ NA AL   L  +G +LV+GGT+NHL+L DLR  GLTG + ++  D   ITVNKNA+  D    +   G+RIGTPA+T+RG+
Sbjct:  145 DAQTGQIDYDDLASKARAIRPKLITSGASAYPRIIDFARMRQIADEVGALLMADIAHIAGLVAAGEHPSPVGHAHVITTTTHKTLRGPRGGLILMGD---------------DFAKQLNSSVFPGTQGGPLMHVIAGKAVAFGEALRPEFRQYAAQIRRNARALAEGLMAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAIPDDPQPPMKTSGIRIGTPAVTTRGM 369          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_BEII9 (Serine hydroxymethyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=glyA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56
Identity = 116/246 (47.15%), Postives = 150/246 (60.98%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            ID D +E  A + +PKLII GGSAYPR WD+ARFRA+AD  GA    DMAH +GLVA     +PF + H+VT+TTHK+LRGPR G++                   D   KIN AVFP LQGGP  H I A AVA  +A  P F+ YA+QV  NA  L + L  KG+++ +GGT+NHL+L DLRP  LTG   E      +IT NKN V F  +S     G+R+G+PA TSRG   ++F+ + + +
Sbjct:  166 IDMDAVEALAKEHKPKLIIAGGSAYPRHWDFARFRAIADSVGAYFFVDMAHFAGLVAGGAHPSPFPHAHVVTSTTHKTLRGPRGGLVLTNDA--------------DIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPDFRLYAQQVVVNAGTLASRLVEKGFAISSGGTDNHLMLVDLRPKQLTGKAAEAALGRASITCNKNGVPFDTASPFVTSGIRLGSPAATSRGFGTKEFQDVADLI 397          
The following BLAST results are available for this feature:
BLAST of EY757184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_NATTJ4.388e-5644.70Serine hydroxymethyltransferase OS=Natranaerobius ... [more]
GLYA_CLOPH4.388e-5645.24Serine hydroxymethyltransferase OS=Clostridium phy... [more]
GLYA_BACV84.388e-5645.77Serine hydroxymethyltransferase OS=Bacteroides vul... [more]
GLYA1_PSEAE4.388e-5649.17Serine hydroxymethyltransferase 1 OS=Pseudomonas a... [more]
GLYA_WOLSU5.731e-5647.95Serine hydroxymethyltransferase OS=Wolinella succi... [more]
GLYA_MARMS5.731e-5647.97Serine hydroxymethyltransferase OS=Marinomonas sp.... [more]
GLYA_GLUOX5.731e-5645.53Serine hydroxymethyltransferase OS=Gluconobacter o... [more]
GLYA_DESAP5.731e-5647.67Serine hydroxymethyltransferase OS=Desulforudis au... [more]
GLYA_CHLSY5.731e-5648.75Serine hydroxymethyltransferase OS=Chloroflexus au... [more]
GLYA_BEII95.731e-5647.15Serine hydroxymethyltransferase OS=Beijerinckia in... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757184 ID=EY757184; Name=EY757184; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGAATTCGAGTACTGGGTATATTGATTACGATAAGTTGGA
GGAGAAGGCGTTGGATTTTAGGCCGAAGTTGATCATTTGCGGTGGGAGTG
CGTATCCGAGGGACTGGGATTATGCTAGATTCAGAGCTGTTGCTGATAAG
TGTGGTGCCCTTTTGCTCTGTGATATGGCTCATATCAGTGGCCTTGTTGC
TGCTCAGGAAGCTGCAAACCCCTTTGAGTACTGTCACATAGTCACAACCA
CTACTCACAAGAGCTTGCGGGGTCCTAGGGCTGGTATGATCTTCTACCGG
AAGGGTCCTAAACCACCCAAGAAGGGCCAGCCAGAGGGTGCGGTTTATGA
CTTTGAAGACAAGATCAACTTTGCTGTCTTCCCATCCCTTCAAGGTGGTC
CTCACAACCACCAGATTGGTGCTCTAGCTGTTGCCCTGAAACAGGCCTCG
ACCCCTGCATTCAAGGCCTATGCGAAACAAGTCAAGGCCAATGCAGTTGC
ACTTGGGAACTACCTGACGGGCAAGGGATACAGCCTTGTCACTGGTGGAA
CTGAGAACCACCTTGTTCTCTGGGATCTACGCCCTCTTGGATTGACTGGC
AATAAGGTTGAGAAGCTCTGTGACCTTTGCAACATTACTGTGAACAAGAA
TGCTGTGTTTGGTGACAGCAGTGCCTTGGCCCCTGGAGGAGTAAGAATCG
GTACTCCTGCCATGACTTCCAGAGGTTTGTTGGGAGAAGACTTTCGAGCA
ATTGGAGAGNTTCTTCACCGCGCTGTGACCCTCACGTTGGAAATTCAAAG
GAGTATGGAAAGCTCTTGAGGACTTCANCAGGGTCTGGTGAACACAGGAC
TCGAGGCCCTCAGGGCTGATGTGAGAAGTCGCCACTCA
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