EY757184

Overview
NameEY757184
Unique NameEY757184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56
Identity = 115/246 (46.75%), Postives = 154/246 (62.60%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIG 756
            T  IDYD+LE+ AL+  PK+I+ GGSAYPR +D+ R R +ADK GAL + DMAH +GLVA     +P  + H+VTTTTHK+LRGPRAGMI  +                +F   I+   FP +QGGP  H I A AV  K+A  P+FK YA QV ANA  L   L  +G+ +++GGT+ HL+L D+   G+ G++ EK      ITVNKNA+ F  +  + P GVRIGTPA+T+RG+   + R +G
Sbjct:  152 TETIDYDELEKLALEHHPKVIVGGGSAYPRIFDFKRMREIADKAGALFMVDMAHFAGLVAGGAHPSPVPHAHVVTTTTHKTLRGPRAGMILSK---------------QEFAAAIDKVTFPGMQGGPLVHIIAAKAVCFKEAMEPSFKDYANQVVANAKVLAQSLADQGFRIISGGTDTHLMLIDVFAAGMLGSEAEKALGEAGITVNKNAIPFDTNPPMKPSGVRIGTPALTTRGMKEPEMRQVG 382          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA2_VIBCH (Serine hydroxymethyltransferase 2 OS=Vibrio cholerae GN=glyA2 PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56
Identity = 117/246 (47.56%), Postives = 151/246 (61.38%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            I+YD +   AL+ +PK+II GGSA PR  D+A+FR++ D+ GALL+ DMAHI+GLVA     +P  + H+VTTTTHK+LRGPR GMI                   +   KIN AVFP LQGGP  H I A AVA  +A  P F+ Y   V  NA  L   L  +G  +VTGGT+ HL+L DLRP GL GN+VE+  +   IT NKN + F +   +   G+R+GTPA TSRG   E+F+ IGE +
Sbjct:  168 INYDSVRALALEHKPKMIIAGGSAIPRTIDFAQFRSIVDEVGALLMVDMAHIAGLVATGAHPSPLPHAHVVTTTTHKTLRGPRGGMILTNSE--------------EIHKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFRTYIDSVIDNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDEEKPMITSGIRLGTPAGTSRGFGREEFKLIGEWI 399          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA1_AGRT5 (Serine hydroxymethyltransferase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glyA1 PE=3 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56
Identity = 119/246 (48.37%), Postives = 146/246 (59.35%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            +D D++E KA + RPKLI+ GG+AY R WD+ RFR +AD+ GA L+ DMAHI+GLVA  +  +PF +CH+ TTTTHKSLRGPR GMI                   D   K N AVFP LQGGP  H I A AVA  +A  P FK YA QV  NA AL   L   G  +V+GGT+NHL+L DLR    TG + E       IT NKN + F         GVR+GTPA T+RG    +FR IG+ +
Sbjct:  158 LDMDEVERKAKETRPKLILAGGTAYSRVWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMILTNDE--------------DLAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKDYAAQVVKNAKALAETLIEGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFKEAEFREIGKLI 389          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA2_PSEAE (Serine hydroxymethyltransferase 2 OS=Pseudomonas aeruginosa GN=glyA2 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.485e-56
Identity = 117/239 (48.95%), Postives = 150/239 (62.76%), Query Frame = 1
Query:   13 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRG 726
            +++TG IDYD++E  A++ +PK+I+ G SAY +  D+ RFRA+ADK GALL  DMAH++GLVAA    NP  +  +VTTTTHK+LRGPR G+I  R             A  + E K+N AVFP  QGGP  H I A AV  K+A  P FK Y  QV  NA A+     G+GY +V+GGT+NHL+L  L   GLTG   +      +ITVNKNAV  D  S     G+RIGTPA+T+RG
Sbjct:  148 DTATGLIDYDEVERLAVEHKPKMIVAGFSAYSKTLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLILAR-------------ANEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKDYQAQVIRNAKAMAEVFIGRGYDVVSGGTDNHLMLISLVKQGLTGKAADAALGAAHITVNKNAVPNDPQSPFVTSGIRIGTPAVTTRG 373          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_THET8 (Serine hydroxymethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glyA PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.776e-56
Identity = 115/253 (45.45%), Postives = 151/253 (59.68%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAV 777
            T  ID +++   AL+ RPK+I+ G SAYPR WD+  FR +AD+ GA L+ DMAH +GLVAA    NP  Y H+VT+TTHK+LRGPR G+I                   +   +I+  +FP +QGGP  H I   AVA  +A  P FK Y++ V  NA  L   L  +GY +VTGGT+NHL L DLRP GLTG + E+  D   ITVNKNA+ F         G+RIGTPA+T+RG   E+   + E + RA+
Sbjct:  147 TELIDLEEVRRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLILSNDP--------------ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL 385          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_THET2 (Serine hydroxymethyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glyA PE=3 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 9.776e-56
Identity = 115/253 (45.45%), Postives = 151/253 (59.68%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAV 777
            T  ID +++   AL+ RPK+I+ G SAYPR WD+  FR +AD+ GA L+ DMAH +GLVAA    NP  Y H+VT+TTHK+LRGPR G+I                   +   +I+  +FP +QGGP  H I   AVA  +A  P FK Y++ V  NA  L   L  +GY +VTGGT+NHL L DLRP GLTG + E+  D   ITVNKNA+ F         G+RIGTPA+T+RG   E+   + E + RA+
Sbjct:  147 TELIDLEEVRRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLILSNDP--------------ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEALARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL 385          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_DESVV (Serine hydroxymethyltransferase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=glyA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.776e-56
Identity = 122/266 (45.86%), Postives = 155/266 (58.27%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVTLTLEIQRSMESS 816
            TG IDY+++   A + +P LI+ G SAYPR  D+ARFRA+AD+ GA L+ DMAHI+GLVAA    +P ++ H  TTTTHK+LRGPR GMI                +  D    +N  +FP +QGGP  H I A AVA  +A  PAFK Y KQV  NA AL   LT  G+ LV+GGT+NHL+L DL    +TG   E   D   ITVNKN V F   S     GVR+GTPA+T+RG+   +   +G  +  A+  T    R  E S
Sbjct:  147 TGRIDYEQVAALAREHKPSLIVAGASAYPRTIDFARFRAIADEVGAKLMVDMAHIAGLVAAGYHPSPVQHAHYTTTTTHKTLRGPRGGMIL---------------STEDNGKTLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPAFKEYQKQVVDNAAALAGVLTAAGFDLVSGGTDNHLMLVDLTSKDVTGKDAEIALDKAGITVNKNTVPFETRSPFVTSGVRLGTPALTTRGMKAAEMEKVGGWIVDAIANTTNETRLAEIS 397          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_DESVH (Serine hydroxymethyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=glyA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.776e-56
Identity = 122/266 (45.86%), Postives = 155/266 (58.27%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVTLTLEIQRSMESS 816
            TG IDY+++   A + +P LI+ G SAYPR  D+ARFRA+AD+ GA L+ DMAHI+GLVAA    +P ++ H  TTTTHK+LRGPR GMI                +  D    +N  +FP +QGGP  H I A AVA  +A  PAFK Y KQV  NA AL   LT  G+ LV+GGT+NHL+L DL    +TG   E   D   ITVNKN V F   S     GVR+GTPA+T+RG+   +   +G  +  A+  T    R  E S
Sbjct:  147 TGRIDYEQVAALAREHKPSLIVAGASAYPRTIDFARFRAIADEVGAKLMVDMAHIAGLVAAGYHPSPVQHAHYTTTTTHKTLRGPRGGMIL---------------STEDNGKTLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPAFKEYQKQVVDNAAALAGVLTAAGFDLVSGGTDNHLMLVDLTSKDVTGKDAEIALDKAGITVNKNTVPFETRSPFVTSGVRLGTPALTTRGMKAAEMEKVGGWIVDAIANTTNETRLAEIS 397          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_DESDA (Serine hydroxymethyltransferase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=glyA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.776e-56
Identity = 120/253 (47.43%), Postives = 152/253 (60.08%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAV 777
            TG IDYD +  KA + +P +I+ G SAYPR  D+ARFRA+AD+ GA L+ DMAHI+GLVAA    +P  + HI TTTTHK+LRGPR GMI                +  D    +N  +FP +QGGP  H I A AVAL +A  PAFK Y +QV  NA  L   LT  GY LV+GGT+NHL+L DL    +TG   E   D   ITVNKN V F   S     G+R+GT A+T+RG+  E  R +G+ +  A+
Sbjct:  147 TGRIDYDDVAAKAREHKPSVIVAGASAYPRAIDFARFRAIADEVGAKLVVDMAHIAGLVAAGLHQSPVPHAHITTTTTHKTLRGPRGGMIL---------------STEDMGKTLNSQIFPGIQGGPLMHVIAAKAVALGEALHPAFKVYQQQVLDNAATLAACLTEAGYDLVSGGTDNHLMLVDLTSRDITGKDAEIALDTAGITVNKNTVPFETRSPFVTSGIRLGTAALTTRGMKQEHMRTVGQFIIAAL 384          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_CYTH3 (Serine hydroxymethyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=glyA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.776e-56
Identity = 112/250 (44.80%), Postives = 155/250 (62.00%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFY-RXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            +G I+ D +E  AL  +PK+IICG SAY RDWDYARFR +AD  GA+LL D++H +GL+A     +P  +CHIV+TTTHK+LRGPR G+I   +           +G      + ++  VFP  QGGP  H I A AVA ++A +  +  YAKQ++ NA  +      KGY +++GGT+NHL+L DLR   LTG + E      +IT+NKN V F D S     G+R+GT A+TSRG++G+D   I E +
Sbjct:  151 SGLINMDIVEATALKVKPKMIICGASAYSRDWDYARFRKIADSVGAILLADISHPAGLIAKGLLNDPIPHCHIVSTTTHKTLRGPRGGVIMMGKDFENPFGLKTPKGETRMMSNVLDMGVFPGTQGGPLEHVIAAKAVAFQEALSTDYLQYAKQIQKNAQIMAEAFLKKGYDIISGGTDNHLMLIDLRSKNLTGKEAENALIRADITINKNMVPFDDKSPFVTSGMRVGTAAITSRGMVGDDMIRIVEMI 400          
The following BLAST results are available for this feature:
BLAST of EY757184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_ACIBL5.731e-5646.75Serine hydroxymethyltransferase OS=Acidobacteria b... [more]
GLYA2_VIBCH5.731e-5647.56Serine hydroxymethyltransferase 2 OS=Vibrio choler... [more]
GLYA1_AGRT55.731e-5648.37Serine hydroxymethyltransferase 1 OS=Agrobacterium... [more]
GLYA2_PSEAE7.485e-5648.95Serine hydroxymethyltransferase 2 OS=Pseudomonas a... [more]
GLYA_THET89.776e-5645.45Serine hydroxymethyltransferase OS=Thermus thermop... [more]
GLYA_THET29.776e-5645.45Serine hydroxymethyltransferase OS=Thermus thermop... [more]
GLYA_DESVV9.776e-5645.86Serine hydroxymethyltransferase OS=Desulfovibrio v... [more]
GLYA_DESVH9.776e-5645.86Serine hydroxymethyltransferase OS=Desulfovibrio v... [more]
GLYA_DESDA9.776e-5647.43Serine hydroxymethyltransferase OS=Desulfovibrio d... [more]
GLYA_CYTH39.776e-5644.80Serine hydroxymethyltransferase OS=Cytophaga hutch... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757184 ID=EY757184; Name=EY757184; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGAATTCGAGTACTGGGTATATTGATTACGATAAGTTGGA
GGAGAAGGCGTTGGATTTTAGGCCGAAGTTGATCATTTGCGGTGGGAGTG
CGTATCCGAGGGACTGGGATTATGCTAGATTCAGAGCTGTTGCTGATAAG
TGTGGTGCCCTTTTGCTCTGTGATATGGCTCATATCAGTGGCCTTGTTGC
TGCTCAGGAAGCTGCAAACCCCTTTGAGTACTGTCACATAGTCACAACCA
CTACTCACAAGAGCTTGCGGGGTCCTAGGGCTGGTATGATCTTCTACCGG
AAGGGTCCTAAACCACCCAAGAAGGGCCAGCCAGAGGGTGCGGTTTATGA
CTTTGAAGACAAGATCAACTTTGCTGTCTTCCCATCCCTTCAAGGTGGTC
CTCACAACCACCAGATTGGTGCTCTAGCTGTTGCCCTGAAACAGGCCTCG
ACCCCTGCATTCAAGGCCTATGCGAAACAAGTCAAGGCCAATGCAGTTGC
ACTTGGGAACTACCTGACGGGCAAGGGATACAGCCTTGTCACTGGTGGAA
CTGAGAACCACCTTGTTCTCTGGGATCTACGCCCTCTTGGATTGACTGGC
AATAAGGTTGAGAAGCTCTGTGACCTTTGCAACATTACTGTGAACAAGAA
TGCTGTGTTTGGTGACAGCAGTGCCTTGGCCCCTGGAGGAGTAAGAATCG
GTACTCCTGCCATGACTTCCAGAGGTTTGTTGGGAGAAGACTTTCGAGCA
ATTGGAGAGNTTCTTCACCGCGCTGTGACCCTCACGTTGGAAATTCAAAG
GAGTATGGAAAGCTCTTGAGGACTTCANCAGGGTCTGGTGAACACAGGAC
TCGAGGCCCTCAGGGCTGATGTGAGAAGTCGCCACTCA
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