EY757184

Overview
NameEY757184
Unique NameEY757184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_ANATD (Serine hydroxymethyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glyA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.776e-56
Identity = 119/254 (46.85%), Postives = 158/254 (62.20%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVT 780
            T  I+YD++ + A + RPKLI+ G SAYPR  D+ +FR +AD+ GA L+ DMAHI+GLVAA    +P EY   VTTTTHK+LRGPR G+I  +                 +   I+ ++FP +QGGP  H I A AVALK+A T  FK Y  Q+  NA AL   L  +G+ LV+GGT+NHL+L DLR  G+TG   EK+ D  NIT NKNAV F   S +   G+R+GTPA+T+RG    D   + + +H A+T
Sbjct:  150 TETINYDEVLKLAKEHRPKLILAGASAYPRVIDFKKFREIADEVGAYLMVDMAHIAGLVAAGLHPSPVEYADFVTTTTHKTLRGPRGGLILCKE---------------KYAKLIDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFKNYQVQILKNAKALSTRLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKILDEHNITCNKNAVPFDTQSPMITSGIRLGTPAVTTRGFKEGDMLEVADIIHDALT 388          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA3_COLP3 (Serine hydroxymethyltransferase 3 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glyA3 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.776e-56
Identity = 117/246 (47.56%), Postives = 152/246 (61.79%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            IDYD++   A++ +PK+II GGSA PR  D+A+FR +AD+ GA+L+ DMAHI+GLVAA    NP  +  +VTTTTHK+LRGPR G+I                   D   KIN AVFP LQGGP  H I A AVAL +   P+F AY KQV +NA  L + L  +G  +VT GT+ HL+L DLRP GL GN  E+  +   IT NKN + F     +   G+R+GTPA TSRG   ++F  IG+ +
Sbjct:  164 IDYDQVLALAIEHQPKMIIAGGSAIPRQIDFAKFREIADQVGAILMVDMAHIAGLVAAGAHQNPLPFADVVTTTTHKTLRGPRGGLILTNNP--------------DVAKKINSAVFPGLQGGPLMHVIAAKAVALGEVLEPSFGAYIKQVLSNARVLASTLQQRGCDIVTDGTDTHLMLVDLRPKGLKGNTTEESLERAGITCNKNGIPFDSEKPMVTSGIRLGTPAGTSRGFGNDEFELIGQWI 395          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA1_RHILO (Serine hydroxymethyltransferase 1 OS=Rhizobium loti GN=glyA1 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.776e-56
Identity = 118/246 (47.97%), Postives = 148/246 (60.16%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            +D D +E+ A + +PKLI+ GG+AY R WD+ RFR +AD  GA L+ DMAHI+GLVA     +P  + H+VTTTTHKSLRGPR GMI                   D   K+N AVFP LQGGP  H I A AVA  +A  P+FK YA+ V ANA AL + L   G  +V+GGT+NHL+L DLRP   TG + E      NIT NKN + F         GVR+GTPA T+RG    +FR IG+ +
Sbjct:  165 LDMDAIEKTAHETKPKLILAGGTAYSRIWDWKRFREIADAVGAYLMVDMAHIAGLVAGGVHPSPLPHAHVVTTTTHKSLRGPRGGMILCNDE--------------DIAKKMNSAVFPGLQGGPLMHVIAAKAVAFGEALKPSFKVYAESVAANAKALASSLKETGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFGQAEFREIGKLI 396          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_THETN (Serine hydroxymethyltransferase OS=Thermoanaerobacter tengcongensis GN=glyA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.277e-55
Identity = 119/249 (47.79%), Postives = 154/249 (61.85%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXL 765
            TGYIDYD++E+ A   +PKLI+ G SAYPR  D+ +FR +ADK GA L+ DMAHI+GLVAA    NP  Y  +VTTTTHK+LRGPR G I  +                +    I+ A+FP  QGGP  H I A AV  K+A +  FK Y K++  NA AL N L  +G +LV+GGT+NHL+L DLR  G+TG ++E   D  NIT NKNA+ F         GVR+GTPA+T+RG+  ED   I + +
Sbjct:  149 TGYIDYDQVEDLAKKHKPKLIVAGASAYPRIIDFKKFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILCK---------------QEHAKAIDKALFPGTQGGPLMHIIAAKAVCFKEALSDEFKEYQKRIVENAKALANALMERGINLVSGGTDNHLMLLDLRNTGITGKELETRLDEVNITCNKNAIPFDPLGPNVTSGVRLGTPAVTTRGMKPEDMVEIADII 382          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_RHOS4 (Serine hydroxymethyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=glyA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.277e-55
Identity = 120/250 (48.00%), Postives = 149/250 (59.60%), Query Frame = 1
Query:   31 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAV 777
            IDYD++   A + +PKLII GGSA PR  D+ARFRA+AD+ GALL+ DMAH +GLVA     +PF +  + TTTTHK+LRGPR GMI                   +   K+N A+FP +QGGP  H I A AVA  +A  P FKAYA QV  NA AL + L   G  +VTGGT+ HL+L DLRP G+ GN  EK     +IT NKN + F         GVR+GTPA T+RG    +FR IG  +   V
Sbjct:  161 IDYDQVAALAREHKPKLIIAGGSAIPRQIDFARFRAIADEVGALLMVDMAHFAGLVAGGAHPSPFPHADVATTTTHKTLRGPRGGMILTNSE--------------EIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKAYAAQVVKNAQALADELMKGGLDIVTGGTDTHLMLVDLRPKGVKGNATEKALGRAHITCNKNGIPFDPEKPTVTSGVRLGTPAGTTRGFGEAEFREIGRLIVEVV 396          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.277e-55
Identity = 117/258 (45.35%), Postives = 153/258 (59.30%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIF----YRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVT 780
            TG ID +K+EE ALDF+P+LIICG SAY + +D+  FR +ADK GA L+ D+AH +GL+AA    +P  +CH VTTTTHK+LRGPR GMI     +               V    + ++  V P +QGGP  H I   AVA  +A  P F+ YA QV+ NA ++    T  GY++V+GGT+NHL+L DLR   + G   E L     ITVNKN V F D S     G+RIGT AMT+RG+   D   I E + R +T
Sbjct:  149 TGIIDMNKVEEMALDFKPRLIICGASAYSQGFDFKAFREIADKVGAFLMADIAHPAGLIAAGLLTDPMPHCHFVTTTTHKTLRGPRGGMIMMGKDFENPMGITIKTKNGPRVKMMSEVMDAEVMPGIQGGPLMHIIAGKAVAFGEALRPEFREYAVQVRKNAASMAERFTSLGYNIVSGGTKNHLMLLDLRNKDVNGKVAENLLHDAGITVNKNMVPFDDKSPFVTSGIRIGTAAMTTRGMKEADATLIAELIDRVIT 406          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_MARMM (Serine hydroxymethyltransferase OS=Maricaulis maris (strain MCS10) GN=glyA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.277e-55
Identity = 116/254 (45.67%), Postives = 150/254 (59.06%), Query Frame = 1
Query:   19 STGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAV 777
            S   IDYD +  KA++ +P+LII GGSAYPR+ D+A FR +AD+ GA L+ DMAH++GLVA     NP  + H+ TTTTHK+LRGPR GMI                   D   K N A+FP LQGGP  H I   AVA  +A  P FK Y  +V AN  AL   +T  GY++V+GGT++HL L DLRP GL GN  E+  +   IT NKN V F         G+R+G+PA T+RG    +F  +GE + R +
Sbjct:  161 SDARIDYDAVRAKAIEVKPQLIIAGGSAYPREIDFAEFRKIADEVGAYLMVDMAHVAGLVAGGVYPNPMPHAHVCTTTTHKTLRGPRGGMILSNDP--------------DLGKKFNSAIFPGLQGGPLMHVIAGKAVAFGEALQPEFKDYVTRVVANCQALSKAITDGGYAIVSGGTDSHLALVDLRPKGLKGNSAEQALERAFITCNKNGVPFDPEKPTVTSGLRVGSPAATTRGFGVAEFTLVGELMVRVL 400          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_CHLTE (Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.277e-55
Identity = 121/261 (46.36%), Postives = 154/261 (59.00%), Query Frame = 1
Query:   13 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIF----YRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAVT 780
            +  TG ID +K+EE A   +PKLII G SAY + +D+  FR VADK GALL+ D+AH +GLVAA  +ANP  +CH VTTTTHK+LRGPR GMI     +               V    + I+  V P +QGGP  H I   AVA  +A  P FKAYA+Q+K NA A+       GY +V+GGT+NHL+L DLR   + G   E L     ITVNKN V F D S     G+RIGTPAMT+RG+   +   I E + R ++
Sbjct:  146 DKETGIIDMNKVEEMARRVKPKLIITGASAYSQGFDFKAFREVADKVGALLMADIAHPAGLVAAGLSANPMPHCHFVTTTTHKTLRGPRGGMIMMGKDFENPLGLTINTKNGSRVKMMSEVIDAEVMPGIQGGPLMHIIAGKAVAFGEALQPEFKAYAQQIKDNAAAMAAKFLAAGYHIVSGGTKNHLMLLDLRNKNVNGKVAENLLHEAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMKVAEAEKIVEFIDRVIS 406          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAA (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=glyA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.277e-55
Identity = 117/240 (48.75%), Postives = 152/240 (63.33%), Query Frame = 1
Query:   13 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGL 729
            ++ TG IDYD L  KA   RPKLI  G SAYPR  D+AR R +AD+ GALL+ D+AHI+GLVAA E  +P  + H++TTTTHK+LRGPR G+I                   DF  ++N +VFP  QGGP  H I   AVA  +A  P F+ YA Q++ NA AL   L  +G +LV+GGT+NHL+L DLR  GLTG + ++  D   ITVNKNA+  D    +   G+RIGTPA+T+RG+
Sbjct:  145 DAQTGQIDYDDLASKARAIRPKLITSGVSAYPRIIDFARMRQIADEVGALLMADIAHIAGLVAAGEHPSPVGHAHVITTTTHKTLRGPRGGLILMGD---------------DFAKQLNSSVFPGTQGGPLMHVIAGKAVAFGEALRPEFRQYAAQIRRNARALAEGLMAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAIPDDPQPPMKTSGIRIGTPAVTTRGM 369          
BLAST of EY757184 vs. ExPASy Swiss-Prot
Match: GLYA_ANOFW (Serine hydroxymethyltransferase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=glyA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.277e-55
Identity = 120/253 (47.43%), Postives = 154/253 (60.87%), Query Frame = 1
Query:   22 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLGEDFRAIGEXLHRAV 777
            T  I+YD + EKAL  +PKLI+ G SAYPR  D+A+FR +AD+ GA  + DMAHI+GLVAA    NP  Y H VTTTTHK+LRGPR GMI  +                 F  +I+ A+FP +QGGP  H I A AVAL +A    FK YA+ +  NA  L   L  +G++LV+GGT+NHL+L DLR +GLTG   EK+ D   ITVNKN + +   S     G+RIGT A+TSRG   E+   I   +  A+
Sbjct:  149 THRINYDDVREKALKHKPKLIVAGASAYPRTIDFAKFREIADEVGAYFMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQE---------------QFAKQIDKAIFPGIQGGPLMHVIAAKAVALGEALQDDFKTYAQNIVNNAKRLAEALVAEGFTLVSGGTDNHLLLIDLRSIGLTGKVAEKVLDEIGITVNKNTIPYDPESPFVTSGIRIGTAAVTSRGFGLEEMDEIARIISIAL 386          
The following BLAST results are available for this feature:
BLAST of EY757184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_ANATD9.776e-5646.85Serine hydroxymethyltransferase OS=Anaerocellum th... [more]
GLYA3_COLP39.776e-5647.56Serine hydroxymethyltransferase 3 OS=Colwellia psy... [more]
GLYA1_RHILO9.776e-5647.97Serine hydroxymethyltransferase 1 OS=Rhizobium lot... [more]
GLYA_THETN1.277e-5547.79Serine hydroxymethyltransferase OS=Thermoanaerobac... [more]
GLYA_RHOS41.277e-5548.00Serine hydroxymethyltransferase OS=Rhodobacter sph... [more]
GLYA_PELLD1.277e-5545.35Serine hydroxymethyltransferase OS=Pelodictyon lut... [more]
GLYA_MARMM1.277e-5545.67Serine hydroxymethyltransferase OS=Maricaulis mari... [more]
GLYA_CHLTE1.277e-5546.36Serine hydroxymethyltransferase OS=Chlorobium tepi... [more]
GLYA_CHLAA1.277e-5548.75Serine hydroxymethyltransferase OS=Chloroflexus au... [more]
GLYA_ANOFW1.277e-5547.43Serine hydroxymethyltransferase OS=Anoxybacillus f... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757184 ID=EY757184; Name=EY757184; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGAATTCGAGTACTGGGTATATTGATTACGATAAGTTGGA
GGAGAAGGCGTTGGATTTTAGGCCGAAGTTGATCATTTGCGGTGGGAGTG
CGTATCCGAGGGACTGGGATTATGCTAGATTCAGAGCTGTTGCTGATAAG
TGTGGTGCCCTTTTGCTCTGTGATATGGCTCATATCAGTGGCCTTGTTGC
TGCTCAGGAAGCTGCAAACCCCTTTGAGTACTGTCACATAGTCACAACCA
CTACTCACAAGAGCTTGCGGGGTCCTAGGGCTGGTATGATCTTCTACCGG
AAGGGTCCTAAACCACCCAAGAAGGGCCAGCCAGAGGGTGCGGTTTATGA
CTTTGAAGACAAGATCAACTTTGCTGTCTTCCCATCCCTTCAAGGTGGTC
CTCACAACCACCAGATTGGTGCTCTAGCTGTTGCCCTGAAACAGGCCTCG
ACCCCTGCATTCAAGGCCTATGCGAAACAAGTCAAGGCCAATGCAGTTGC
ACTTGGGAACTACCTGACGGGCAAGGGATACAGCCTTGTCACTGGTGGAA
CTGAGAACCACCTTGTTCTCTGGGATCTACGCCCTCTTGGATTGACTGGC
AATAAGGTTGAGAAGCTCTGTGACCTTTGCAACATTACTGTGAACAAGAA
TGCTGTGTTTGGTGACAGCAGTGCCTTGGCCCCTGGAGGAGTAAGAATCG
GTACTCCTGCCATGACTTCCAGAGGTTTGTTGGGAGAAGACTTTCGAGCA
ATTGGAGAGNTTCTTCACCGCGCTGTGACCCTCACGTTGGAAATTCAAAG
GAGTATGGAAAGCTCTTGAGGACTTCANCAGGGTCTGGTGAACACAGGAC
TCGAGGCCCTCAGGGCTGATGTGAGAAGTCGCCACTCA
back to top