EY757179

Overview
NameEY757179
Unique NameEY757179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY757179 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11
Identity = 34/96 (35.42%), Postives = 48/96 (50.00%), Query Frame = 2 
Query:    8 SAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 295
            SA+W WMT  +  +PS+HD     W P+  D  ++R P +GT  NI+ G   CG+G    + + +  +  Y DLLGVG         L C  Q  F
Sbjct:  225 SALWFWMT-AQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGY-----GNNLDCYSQTPF 314
[Close]
BLAST of EY757179 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 32/99 (32.32%), Postives = 45/99 (45.45%), Query Frame = 2 
Query:    8 SAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAFNPN 304
            +A+W WM P     PS H+   G W P++ D  + R P FG   NI+     C +       N + +YL Y D+L     Q  P + L C  Q+ F  N
Sbjct:  214 AALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDML-----QVDPGDNLYCDNQETFEDN 307
The following BLAST results are available for this feature:
BLAST of EY757179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
CHI5_PHAVU4.580e-1135.42Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHI8_POPTR7.813e-1132.32Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-D04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757179 ID=EY757179; Name=EY757179; organism=Citrus sinensis; type=EST; length=673bp
CCACGCGTCCGCAATTTGGAAGTGGATGACCCCAGTCAAGAAATCCCAGC
CTTCAGCCCATGATGCCTTTGTTGGCAACTGGAAGCCCACCAAGAATGAT
ACTTTGTCCAAACGGGGACCTAACTTTGGTACCACAATGAATATCCTCTA
TGGTGAGAGCGTATGCGGTCAGGGTGATATTGATGCTATGAACAACATTG
TCTCTCATTACTTGTATTACCTTGATCTGTTGGGTGTTGGCCGAGAGCAG
GCAGGACCTAATGAAGAACTCTCTTGTGCTGAGCAGAAAGCCTTCAACCC
AAACACCGCACCTTCAGCTGCATCTTCTTGAGGACGTTTATTGTAGCCAA
GCTATTATTGTGGGAGTGACTCTCTCTCTCTCTCTAGGTGGGTACCATTA
CAATAAGACTGGGGTTAATTAAACTATTTGTTGTAAGTTTTTTTTTTTTT
TTCCATCTTTTCATATATTGCGCAAGGTCAATTAGTGTGTGGATTGGTCT
GCCCCTCTTCATTGCCGTTGTAGATTTGAGATTCATTTGGTTTGTAAAAT
CTTCGTTATATCTGGTTACATATGTAATGATGAACCGCATGAACCACTCG
TGTGTTTCAATAGCAGAATTGTAAAGTATATGCTTATATTTTATTAAAAA
AAAAAAAAAAAAAAAAAAAAAAA
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