EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:350..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK1_SACOF (Nucleoside diphosphate kinase 1 OS=Saccharum officinarum GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 5.984e-26
Identity = 53/72 (73.61%), Postives = 59/72 (81.94%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+ VV TGR IIGATNP  S PGTIRGD A+  GRN+IHGSDS+ESA KEIALWFP+G  +WQSS HPWIYE
Sbjct:   77 GKSVVTTGRKIIGATNPLVSEPGTIRGDFAVDIGRNVIHGSDSIESANKEIALWFPEGLADWQSSQHPWIYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SOLLC (Nucleoside diphosphate kinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.616e-25
Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+GVV TGR IIGATNP +SA GTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH  IYE
Sbjct:   73 GKGVVATGRKIIGATNPLESAAGTIRGDFAIDIGRNVIHGSDAVESARKEIALWFPEGIAEWQSSLHSCIYE 144          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSJ (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. japonica GN=NDKR PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 7.315e-24
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+ VV TGR IIGAT P ++APGTIR D A+  GRN+IHGSDSV++ +KEIALWFP+G   W+S+LHPWIYE
Sbjct:   77 GKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEGLAEWRSNLHPWIYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSI (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. indica GN=NDKR PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 7.315e-24
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+ VV TGR IIGAT P ++APGTIR D A+  GRN+IHGSDSV++ +KEIALWFP+G   W+S+LHPWIYE
Sbjct:   77 GKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEGLAEWRSNLHPWIYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ASPFU (Nucleoside diphosphate kinase OS=Aspergillus fumigatus GN=ndk1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.380e-22
Identity = 50/73 (68.49%), Postives = 59/73 (80.82%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGRTI+GATNP  SAPGTIRGD AI  GRN+ HGSDSVE+A+KEIALWF P+  I+W+S+   W+YE
Sbjct:   79 GRDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVENAKKEIALWFKPEELISWKSATFDWVYE 151          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_CHICK (Nucleoside diphosphate kinase OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 4.438e-21
Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESAQKEI+LWF P   I+++S  H W+YE
Sbjct:   81 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAQKEISLWFKPAELIDYRSCAHDWVYE 153          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_RAT (Nucleoside diphosphate kinase B OS=Rattus norvegicus GN=Nme2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 4.438e-21
Identity = 48/73 (65.75%), Postives = 56/73 (76.71%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEI LWF P+  I+++S  H W+YE
Sbjct:   80 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFKPEELIDYKSCAHDWVYE 152          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKA2_BOVIN (Nucleoside diphosphate kinase A 2 OS=Bos taurus GN=NME1-2 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 4.438e-21
Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEIALWF P+  +N++S    WIYE
Sbjct:   80 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIALWFRPEELVNYKSCAQNWIYE 152          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKA1_BOVIN (Nucleoside diphosphate kinase A 1 OS=Bos taurus GN=NME1-1 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 4.438e-21
Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEIALWF P+  +N++S    WIYE
Sbjct:   80 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIALWFHPEELVNYKSCAQNWIYE 152          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_MOUSE (Nucleoside diphosphate kinase B OS=Mus musculus GN=Nme2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 7.570e-21
Identity = 48/73 (65.75%), Postives = 56/73 (76.71%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEI LWF P+  I+++S  H W+YE
Sbjct:   80 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIHLWFKPEELIDYKSCAHDWVYE 152          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK1_SACOF5.984e-2673.61Nucleoside diphosphate kinase 1 OS=Saccharum offic... [more]
NDK_SOLLC6.616e-2575.00Nucleoside diphosphate kinase (Fragment) OS=Solanu... [more]
NDK1_ORYSJ7.315e-2466.67Nucleoside diphosphate kinase 1 OS=Oryza sativa su... [more]
NDK1_ORYSI7.315e-2466.67Nucleoside diphosphate kinase 1 OS=Oryza sativa su... [more]
NDK_ASPFU1.380e-2268.49Nucleoside diphosphate kinase OS=Aspergillus fumig... [more]
NDK_CHICK4.438e-2167.12Nucleoside diphosphate kinase OS=Gallus gallus PE=... [more]
NDKB_RAT4.438e-2165.75Nucleoside diphosphate kinase B OS=Rattus norvegic... [more]
NDKA2_BOVIN4.438e-2167.12Nucleoside diphosphate kinase A 2 OS=Bos taurus GN... [more]
NDKA1_BOVIN4.438e-2167.12Nucleoside diphosphate kinase A 1 OS=Bos taurus GN... [more]
NDKB_MOUSE7.570e-2165.75Nucleoside diphosphate kinase B OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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