EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.383e-14
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 226
            GEGV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD  ++A  EI LWF +   ++W  S   W  E
Sbjct:   79 GEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.806e-14
Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 226
            G+GV+ + R +IGAT P  + PGTIRGDLA+  GRN+IHGSD  ++AQ EI LWF    +N W  S   W  E
Sbjct:   79 GDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSAEELNAWTPSDQSWRIE 151          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.806e-14
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            G+GV+ + R +IGAT P ++ PGTIRGDL I  GRN+IHGSD  E+A  EI LWF    + NW  S   W  E
Sbjct:   79 GDGVILSARKLIGATKPLEAEPGTIRGDLGINIGRNVIHGSDGPETASFEIDLWFNSSELNNWNPSDQKWRVE 151          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_MERPR (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius productus GN=nme2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.806e-14
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            GEG+VK    ++G TNPA S PG+IRGD  I  GRNIIHGSD+VE+A+ E+ LWF P+  + +      W+YE
Sbjct:   59 GEGIVKM---MLGETNPADSKPGSIRGDFCINIGRNIIHGSDTVENAKMEVGLWFKPEEFVAYAEKAKAWVYE 128          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_MERHU (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius hubbsi GN=nme2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.806e-14
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            GEG+VK    ++G TNPA S PG+IRGD  I  GRNIIHGSD+VE+A+ E+ LWF P+  + +      W+YE
Sbjct:   59 GEGIVKM---MLGETNPADSKPGSIRGDFCINIGRNIIHGSDTVENAKMEVGLWFKPEEFVAYAEKAKAWVYE 128          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_MERGA (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius gayi GN=nme2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.806e-14
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            GEG+VK    ++G TNPA S PG+IRGD  I  GRNIIHGSD+VE+A+ E+ LWF P+  + +      W+YE
Sbjct:   59 GEGIVKM---MLGETNPADSKPGSIRGDFCINIGRNIIHGSDTVENAKMEVGLWFKPEEFVAYAEKAKAWVYE 128          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_MERBI (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius bilinearis GN=nme2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.806e-14
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            GEG+VK    ++G TNPA S PG+IRGD  I  GRNIIHGSD+VE+A+ E+ LWF P+  + +      W+YE
Sbjct:   59 GEGIVKM---MLGETNPADSKPGSIRGDFCINIGRNIIHGSDTVENAKMEVGLWFKPEEFVAYAEKAKAWVYE 128          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_MERAP (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius australis polylepis GN=nme2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.806e-14
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            GEG+VK    ++G TNPA S PG+IRGD  I  GRNIIHGSD+VE+A+ E+ LWF P+  + +      W+YE
Sbjct:   59 GEGIVKM---MLGETNPADSKPGSIRGDFCINIGRNIIHGSDTVENAKMEVGLWFKPEEFVAYAEKAKAWVYE 128          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_MERAA (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius australis australis GN=nme2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.806e-14
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            GEG+VK    ++G TNPA S PG+IRGD  I  GRNIIHGSD+VE+A+ E+ LWF P+  + +      W+YE
Sbjct:   59 GEGIVKM---MLGETNPADSKPGSIRGDFCINIGRNIIHGSDTVENAKMEVGLWFKPEEFVAYAEKAKAWVYE 128          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_PROM9 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ndk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.359e-14
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 217
            GEGV+ + R +IGAT P ++ PGTIRGDLAI  GRNIIHGSD  ++A+ EI LWF +  +  W +S   W
Sbjct:   79 GEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWYTSDSKW 148          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_PROM11.383e-1450.68Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROMM1.806e-1452.05Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROMA1.806e-1452.05Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDKB_MERPR1.806e-1452.05Nucleoside diphosphate kinase B (Fragments) OS=Mer... [more]
NDKB_MERHU1.806e-1452.05Nucleoside diphosphate kinase B (Fragments) OS=Mer... [more]
NDKB_MERGA1.806e-1452.05Nucleoside diphosphate kinase B (Fragments) OS=Mer... [more]
NDKB_MERBI1.806e-1452.05Nucleoside diphosphate kinase B (Fragments) OS=Mer... [more]
NDKB_MERAP1.806e-1452.05Nucleoside diphosphate kinase B (Fragments) OS=Mer... [more]
NDKB_MERAA1.806e-1452.05Nucleoside diphosphate kinase B (Fragments) OS=Mer... [more]
NDK_PROM92.359e-1454.29Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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