EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_PROM4 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ndk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.963e-14
Identity = 38/73 (52.05%), Postives = 46/73 (63.01%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            GEGV+   R +IG+T P  + PGTIRGDLAI  GRN+IHGSD  E+A  EI LWF    + +W  S   W  E
Sbjct:   79 GEGVILGARKLIGSTKPLDADPGTIRGDLAIDIGRNVIHGSDGPETASFEIGLWFESSELSDWNPSDQLWRVE 151          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_EXIS2 (Nucleoside diphosphate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=ndk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.963e-14
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN 193
            GE VV   R +IG T P ++ PGTIRGD A     N+IHGSDSVESA++E+ LWF   P+N
Sbjct:   77 GEDVVTVSRMMIGKTKPTEALPGTIRGDFANTMSENVIHGSDSVESAERELGLWFQGQPLN 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_LISMH (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=ndk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.529e-13
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 220
            G+  + T R ++G TNP ++ PGTIR D AI T RN+IHGSDS+ESA++EI L+F P   +++Q ++  WI
Sbjct:   77 GDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSLESAKREIQLFFAPQEILSYQKAIDTWI 147          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_BREBN (Nucleoside diphosphate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ndk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.529e-13
Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 220
            G  V+ T R ++G TNP  +A GTIRGD A   G NIIHGSDS ESA++EI LWF  +  ++++ ++  WI
Sbjct:   77 GNNVITTARAMMGKTNPVDAASGTIRGDFATSVGMNIIHGSDSPESAEREIGLWFSAEEVLSFEKTIQRWI 147          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_THEPX (Nucleoside diphosphate kinase OS=Thermoanaerobacter sp. (strain X514) GN=ndk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.997e-13
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 181
            GE  VK  R + GAT   ++ PGTIRGD AI T  NIIHGSDS+ESA++EIALWFP+
Sbjct:   77 GENAVKIVRLLNGATKVEEALPGTIRGDFAISTTFNIIHGSDSIESAKREIALWFPE 133          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_THEP3 (Nucleoside diphosphate kinase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=ndk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.997e-13
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 181
            GE  VK  R + GAT   ++ PGTIRGD AI T  NIIHGSDS+ESA++EIALWFP+
Sbjct:   77 GENAVKIVRLLNGATKVEEALPGTIRGDFAISTTFNIIHGSDSIESAKREIALWFPE 133          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_DEIRA (Nucleoside diphosphate kinase OS=Deinococcus radiodurans GN=ndk PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.997e-13
Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  +   R ++GATNPA +APGTIR D A  TG N+ HGSDS ESA++E+AL+F DG +
Sbjct:   77 GENAIAGWRAMMGATNPANAAPGTIRADFATSTGENVTHGSDSPESAERELALFFGDGEL 136          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKM_HUMAN (Nucleoside diphosphate kinase, mitochondrial OS=Homo sapiens GN=NME4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.997e-13
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INW-----QSSLHP 214
            G  VV+  R +IG T+ A++APGTIRGD ++   RN+IH SDSVE AQ+EI LWF     ++W      SS+HP
Sbjct:  113 GYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQHSSIHP 186          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_LISIN (Nucleoside diphosphate kinase OS=Listeria innocua GN=ndk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.608e-13
Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 220
            G+ V+KT R ++G TNP ++ PGTIR + AI T RN+IHGSDS ESA++EI L+F P   ++++ ++  WI
Sbjct:   77 GDDVIKTARRMMGKTNPLEADPGTIRAEYAIHTNRNVIHGSDSPESAKREIQLFFEPHEILSYEKAVDTWI 147          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_MACNO (Nucleoside diphosphate kinase B (Fragments) OS=Macruronus novaezelandiae GN=nme2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.608e-13
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP-DGPINWQSSLHPWIYE 226
            GEG+VK    ++G TNPA S PG+IRGD  I  GRNIIHGSD++E+A+ EI LWF  +  + +      W+YE
Sbjct:   57 GEGIVKM---MLGETNPADSKPGSIRGDFCINIGRNIIHGSDTLENAKMEIGLWFKGEEFVAYAEKAKAWVYE 126          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_PROM48.963e-1452.05Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_EXIS28.963e-1455.74Nucleoside diphosphate kinase OS=Exiguobacterium s... [more]
NDK_LISMH1.529e-1349.30Nucleoside diphosphate kinase OS=Listeria monocyto... [more]
NDK_BREBN1.529e-1349.30Nucleoside diphosphate kinase OS=Brevibacillus bre... [more]
NDK_THEPX1.997e-1363.16Nucleoside diphosphate kinase OS=Thermoanaerobacte... [more]
NDK_THEP31.997e-1363.16Nucleoside diphosphate kinase OS=Thermoanaerobacte... [more]
NDK_DEIRA1.997e-1356.67Nucleoside diphosphate kinase OS=Deinococcus radio... [more]
NDKM_HUMAN1.997e-1350.00Nucleoside diphosphate kinase, mitochondrial OS=Ho... [more]
NDK_LISIN2.608e-1349.30Nucleoside diphosphate kinase OS=Listeria innocua ... [more]
NDKB_MACNO2.608e-1350.68Nucleoside diphosphate kinase B (Fragments) OS=Mac... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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