EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_MACMG (Nucleoside diphosphate kinase B (Fragments) OS=Macruronus magellanicus GN=nme2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.608e-13
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP-DGPINWQSSLHPWIYE 226
            GEG+VK    ++G TNPA S PG+IRGD  I  GRNIIHGSD++E+A+ EI LWF  +  + +      W+YE
Sbjct:   57 GEGIVKM---MLGETNPADSKPGSIRGDFCINIGRNIIHGSDTLENAKMEIGLWFKGEEFVAYAEKAKAWVYE 126          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METKA (Nucleoside diphosphate kinase OS=Methanopyrus kandleri GN=ndk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.406e-13
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD--GPINWQSSLHPWIYE 226
            G   VK  R IIGAT+PA++APGT+RGD A+  GRN++H SDS ESA++EI + F      I+++     W+YE
Sbjct:   80 GRKAVKVVRNIIGATDPAEAAPGTVRGDFALDIGRNVVHASDSPESAEREIEIVFGKDLSTIDYERCDEEWLYE 153          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_LISMF (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=ndk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.406e-13
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 220
            G+  + T R ++G TNP ++ PGTIR D AI T RN+IHGSDS ESA++EI L+F P   +++Q ++  WI
Sbjct:   77 GDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAKREIQLFFAPQEILSYQKAIDTWI 147          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_LISMC (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=ndk PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.448e-13
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 220
            G+  + T R ++G TNP ++ PGTIR D A+ T RN+IHGSDS ESA++EI L+F P   +++Q ++  WI
Sbjct:   77 GDDAIATARRMMGKTNPLEADPGTIRADYAVHTNRNVIHGSDSPESAKREIQLFFAPQEILSYQKAIDTWI 147          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ENCCU (Nucleoside diphosphate kinase OS=Encephalitozoon cuniculi GN=NDK1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.448e-13
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDG--PINWQSSLHPWIY 223
            G+  V  GR +IG TNP  ++ GTIRGD  + TG+NIIHGSD VE+A+KEI LW  D   P+++      WIY
Sbjct:   77 GKDAVSIGRKLIGETNPQAASVGTIRGDYGVSTGKNIIHGSDCVENAEKEIKLWIGDDVQPVSFFDK--EWIY 147          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ROSCS (Nucleoside diphosphate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=ndk PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.809e-13
Identity = 34/74 (45.95%), Postives = 52/74 (70.27%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            +G  V++  R+++GATNP ++APGTIRGD A+  GRN+IH SDS E+ + E+ L+F  +  ++ + S   WIYE
Sbjct:   76 TGANVIEMVRSMVGATNPGKAAPGTIRGDFALEIGRNLIHASDSPENGEMEVNLFFRAEELVDMRRSTDQWIYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_BACHD (Nucleoside diphosphate kinase OS=Bacillus halodurans GN=ndk PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.809e-13
Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI 220
            GE V+ T R ++GATNPA + PGTIRGD  +    N+IHGSDS ESA++EI ++F    +N +   ++ W+
Sbjct:   77 GENVIATARKMMGATNPADAEPGTIRGDFGVQVAMNVIHGSDSPESAKREIDIFFDSSELNEYDKVVNRWV 147          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METBU (Nucleoside diphosphate kinase OS=Methanococcoides burtonii (strain DSM 6242) GN=ndk PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 7.587e-13
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 226
            G   +K  R I GATNP  + PGTIRGDLA+  GRN++H SD+ ESA++EI L F +  I+ +  +   W+YE
Sbjct:   77 GNNAIKIMRAINGATNPVDALPGTIRGDLAVDMGRNVVHASDAPESAEREIGLHFEESEISGYPRADDEWLYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_THETN (Nucleoside diphosphate kinase OS=Thermoanaerobacter tengcongensis GN=ndk PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.909e-13
Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 181
            GE  VK  R I GAT    + PGTIRGD A  T  N++HGSDSVESA++EIALWFP+
Sbjct:   80 GENAVKLVRMINGATKVEDALPGTIRGDFASSTTYNVVHGSDSVESAKREIALWFPE 136          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_PELTS (Nucleoside diphosphate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ndk PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.909e-13
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G+  V   R ++GAT+P ++APGTIRG   I  GRN+IHGSDS  SAQ+EIAL+F  D  + +   L  W+YE
Sbjct:   77 GKNAVGAAREMMGATDPLKAAPGTIRGTYGIDIGRNVIHGSDSPASAQREIALFFSADELMEYGLELDRWVYE 149          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDKB_MACMG2.608e-1350.68Nucleoside diphosphate kinase B (Fragments) OS=Mac... [more]
NDK_METKA3.406e-1348.65Nucleoside diphosphate kinase OS=Methanopyrus kand... [more]
NDK_LISMF3.406e-1349.30Nucleoside diphosphate kinase OS=Listeria monocyto... [more]
NDK_LISMC4.448e-1347.89Nucleoside diphosphate kinase OS=Listeria monocyto... [more]
NDK_ENCCU4.448e-1350.68Nucleoside diphosphate kinase OS=Encephalitozoon c... [more]
NDK_ROSCS5.809e-1345.95Nucleoside diphosphate kinase OS=Roseiflexus caste... [more]
NDK_BACHD5.809e-1346.48Nucleoside diphosphate kinase OS=Bacillus halodura... [more]
NDK_METBU7.587e-1347.95Nucleoside diphosphate kinase OS=Methanococcoides ... [more]
NDK_THETN9.909e-1361.40Nucleoside diphosphate kinase OS=Thermoanaerobacte... [more]
NDK_PELTS9.909e-1350.68Nucleoside diphosphate kinase OS=Pelotomaculum the... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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