EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_NATPD (Nucleoside diphosphate kinase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=ndk PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.909e-13
Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVE-SAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            G+  V   RT++G T+PA+SAPGTIRGD  +  GRN+IHGSD+   SA++EI L+F D  + +++    PW+YE
Sbjct:   80 GQDAVAQVRTMMGETDPAESAPGTIRGDFGLDLGRNVIHGSDTEPGSAEREIGLFFDDDELQDYERIDEPWLYE 153          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METPE (Nucleoside diphosphate kinase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=ndk PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.909e-13
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP-DGPINWQSSLHPWIYE 226
            G+      RT+ GATNP+++APGTIRGD  +  GRN+IH SD+ ESA +EIAL FP  G + +     P +YE
Sbjct:   77 GKNAAAVVRTLTGATNPSEAAPGTIRGDYGLDIGRNVIHASDAPESAAREIALHFPGTGQVTYTRIDEPVLYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_CORU7 (Nucleoside diphosphate kinase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=ndk PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.909e-13
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 181
            GE  +   R + G T+P ++A PGTIRGD A+  G N++HGSDS ESA++EIA+WFP+
Sbjct:   78 GESAIAAWRQLAGGTHPVEAATPGTIRGDFALTVGENVVHGSDSPESAEREIAIWFPN 135          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_BACLD (Nucleoside diphosphate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ndk PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.909e-13
Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 223
            GE  +   R +IG TNP ++ PGTIRGD  +  G+NIIHGSDS ESA +EI L+F  D  +  +  ++ WIY
Sbjct:   77 GEDAIAVARQLIGKTNPKEALPGTIRGDFGMFVGKNIIHGSDSPESAAREINLFFKEDELVEDEKLMNQWIY 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_UNCMA (Nucleoside diphosphate kinase OS=Uncultured methanogenic archaeon RC-I GN=ndk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.690e-12
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSL-HPWIYE 226
            G+  V   R+++G T P +SAPGTIRGD A+  GRN+IH SDS ESA++EI+L+F    I   + +   W+YE
Sbjct:   80 GKDAVSMVRSMLGKTKPIESAPGTIRGDFALDMGRNVIHASDSPESAKREISLYFKTSEIATYARIDEQWLYE 152          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METMJ (Nucleoside diphosphate kinase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=ndk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.690e-12
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 226
            G+GVV   R ++GATNPA++APG+IRG+ A+  GRN+IH SDS ESA +E+ + F  G  +++     P +YE
Sbjct:   77 GKGVVAVVRRMVGATNPAEAAPGSIRGNFALDIGRNVIHASDSPESAARELGIHFAAGELVDYSRIDEPVLYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METMA (Nucleoside diphosphate kinase OS=Methanosarcina mazei GN=ndk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.690e-12
Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            +G+  +K  R I GATNP  +APGTIRGD A+  GRN++H SDS E+A +EIA+ F D  I
Sbjct:   76 AGKDAIKVMRAINGATNPVDAAPGTIRGDFALDVGRNVVHASDSPEAAAREIAIHFKDSEI 136          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METAC (Nucleoside diphosphate kinase OS=Methanosarcina acetivorans GN=ndk PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.690e-12
Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            +G+  +K  R I GATNP  +APGTIRGD A+  GRN++H SDS E+A +EIA+ F D  I
Sbjct:   76 AGKDAIKVMRAINGATNPVDAAPGTIRGDFALDVGRNVVHASDSPEAAAREIAIHFKDSEI 136          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRZT (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG-----RNIIHGSDSVESAQKEIALWF 175
            SG  V++T RT++GAT P ++ PGTIRGD A   G     +N++HGSDS ESA++EIALWF
Sbjct:   77 SGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRZP (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae (strain P1031) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG-----RNIIHGSDSVESAQKEIALWF 175
            SG  V++T RT++GAT P ++ PGTIRGD A   G     +N++HGSDS ESA++EIALWF
Sbjct:   77 SGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEVIQNVVHGSDSEESAKREIALWF 137          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_NATPD9.909e-1348.65Nucleoside diphosphate kinase OS=Natronomonas phar... [more]
NDK_METPE9.909e-1349.32Nucleoside diphosphate kinase OS=Methanosphaerula ... [more]
NDK_CORU79.909e-1353.45Nucleoside diphosphate kinase OS=Corynebacterium u... [more]
NDK_BACLD9.909e-1348.61Nucleoside diphosphate kinase OS=Bacillus lichenif... [more]
NDK_UNCMA1.690e-1247.95Nucleoside diphosphate kinase OS=Uncultured methan... [more]
NDK_METMJ1.690e-1247.95Nucleoside diphosphate kinase OS=Methanoculleus ma... [more]
NDK_METMA1.690e-1254.10Nucleoside diphosphate kinase OS=Methanosarcina ma... [more]
NDK_METAC1.690e-1254.10Nucleoside diphosphate kinase OS=Methanosarcina ac... [more]
NDK_STRZT2.883e-1255.74Nucleoside diphosphate kinase OS=Streptococcus pne... [more]
NDK_STRZP2.883e-1255.74Nucleoside diphosphate kinase OS=Streptococcus pne... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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