EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRZJ (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae (strain JJA) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG-----RNIIHGSDSVESAQKEIALWF 175
            SG  V++T RT++GAT P ++ PGTIRGD A   G     +N++HGSDS ESA++EIALWF
Sbjct:   77 SGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRR6 (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG-----RNIIHGSDSVESAQKEIALWF 175
            SG  V++T RT++GAT P ++ PGTIRGD A   G     +N++HGSDS ESA++EIALWF
Sbjct:   77 SGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRPS (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae (strain CGSP14) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG-----RNIIHGSDSVESAQKEIALWF 175
            SG  V++T RT++GAT P ++ PGTIRGD A   G     +N++HGSDS ESA++EIALWF
Sbjct:   77 SGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRPN (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae GN=ndk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG-----RNIIHGSDSVESAQKEIALWF 175
            SG  V++T RT++GAT P ++ PGTIRGD A   G     +N++HGSDS ESA++EIALWF
Sbjct:   77 SGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRPI (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG-----RNIIHGSDSVESAQKEIALWF 175
            SG  V++T RT++GAT P ++ PGTIRGD A   G     +N++HGSDS ESA++EIALWF
Sbjct:   77 SGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRP2 (Nucleoside diphosphate kinase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG-----RNIIHGSDSVESAQKEIALWF 175
            SG  V++T RT++GAT P ++ PGTIRGD A   G     +N++HGSDS ESA++EIALWF
Sbjct:   77 SGPKVIETWRTMMGATRPEEALPGTIRGDFAKAAGENEIIQNVVHGSDSEESAKREIALWF 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_EXISA (Nucleoside diphosphate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 181
            GE +V   R +IG T P  + PGTIRGD A    +N+IHGSDSV+SA++E++LWF +
Sbjct:   77 GEDIVAVSRLMIGKTKPVDAQPGTIRGDFASTMSQNVIHGSDSVDSAERELSLWFAE 133          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_CORJK (Nucleoside diphosphate kinase OS=Corynebacterium jeikeium (strain K411) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.766e-12
Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 181
            GE  +   R + G T+P + A PGTIRGD A+  G N++HGSDS ESA++EI +WFP+
Sbjct:   78 GESAIAAWRQLAGGTHPVEKATPGTIRGDFALTVGENVVHGSDSPESAEREIGIWFPN 135          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MOOTA (Nucleoside diphosphate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.918e-12
Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 175
            G GV+   R ++GATNP ++APGTIRGD A+ T  N+IHG+DS  SA++EIAL+F
Sbjct:   79 GPGVIAGLRRLMGATNPQEAAPGTIRGDFALETSDNVIHGADSPASAEREIALYF 133          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_FRASC (Nucleoside diphosphate kinase OS=Frankia sp. (strain CcI3) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.918e-12
Identity = 31/58 (53.45%), Postives = 45/58 (77.59%), Query Frame = 2
Query:    5 ASGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            A G   V+  R +IGAT+P ++APG++RGD A+  G+N++HGSDS ESA++EI L+FP
Sbjct:   77 AEGPRAVEASRGLIGATDPVKAAPGSLRGDYALEIGQNLVHGSDSPESAKREIDLFFP 134          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_STRZJ2.883e-1255.74Nucleoside diphosphate kinase OS=Streptococcus pne... [more]
NDK_STRR62.883e-1255.74Nucleoside diphosphate kinase OS=Streptococcus pne... [more]
NDK_STRPS2.883e-1255.74Nucleoside diphosphate kinase OS=Streptococcus pne... [more]
NDK_STRPN2.883e-1255.74Nucleoside diphosphate kinase OS=Streptococcus pne... [more]
NDK_STRPI2.883e-1255.74Nucleoside diphosphate kinase OS=Streptococcus pne... [more]
NDK_STRP22.883e-1255.74Nucleoside diphosphate kinase OS=Streptococcus pne... [more]
NDK_EXISA2.883e-1252.63Nucleoside diphosphate kinase OS=Exiguobacterium s... [more]
NDK_CORJK3.766e-1251.72Nucleoside diphosphate kinase OS=Corynebacterium j... [more]
NDK_MOOTA4.918e-1258.18Nucleoside diphosphate kinase OS=Moorella thermoac... [more]
NDK_FRASC4.918e-1253.45Nucleoside diphosphate kinase OS=Frankia sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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