EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_FRAAA (Nucleoside diphosphate kinase OS=Frankia alni (strain ACN14a) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.918e-12
Identity = 31/58 (53.45%), Postives = 45/58 (77.59%), Query Frame = 2
Query:    5 ASGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            A G   V+  R +IGAT+P ++APG++RGD A+  G+N++HGSDS ESA++EI L+FP
Sbjct:   77 AEGPRAVEASRGLIGATDPVKAAPGSLRGDYALEIGQNLVHGSDSPESAKREIDLFFP 134          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_DESHY (Nucleoside diphosphate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.918e-12
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G+ VV   R ++GATNPA + PG+IRG   +   RN+IHGSDSV SA++EIAL+F P+   +++ +   W+ E
Sbjct:   77 GKNVVALARELMGATNPANANPGSIRGSFGMDISRNVIHGSDSVASAEREIALYFRPEELCDYRKAGEEWLSE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_DESHD (Nucleoside diphosphate kinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.918e-12
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G+ VV   R ++GATNPA + PG+IRG   +   RN+IHGSDSV SA++EIAL+F P+   +++ +   W+ E
Sbjct:   77 GKNVVALARELMGATNPANANPGSIRGSFGMDISRNVIHGSDSVASAEREIALYFRPEELCDYRKAGEEWLSE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_CORGL (Nucleoside diphosphate kinase OS=Corynebacterium glutamicum GN=ndk PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.918e-12
Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNP-AQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 181
            GE  +   R + G T+P A++ PGTIRGD A+  G N++HGSDS ESA++EI++WFP+
Sbjct:   78 GERAIDAWRQLAGGTDPVAKATPGTIRGDFALTVGENVVHGSDSPESAEREISIWFPN 135          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_CORGB (Nucleoside diphosphate kinase OS=Corynebacterium glutamicum (strain R) GN=ndk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.918e-12
Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNP-AQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 181
            GE  +   R + G T+P A++ PGTIRGD A+  G N++HGSDS ESA++EI++WFP+
Sbjct:   78 GERAIDAWRQLAGGTDPVAKATPGTIRGDFALTVGENVVHGSDSPESAEREISIWFPN 135          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKM_MOUSE (Nucleoside diphosphate kinase, mitochondrial OS=Mus musculus GN=Nme4 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.918e-12
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLH 211
            G  VV   R +IG T+  ++APGTIRGD ++   RN+IH SDSV+ AQ+EI LWF     +NW    H
Sbjct:  112 GPNVVHISRAMIGHTDSTEAAPGTIRGDFSVHISRNVIHASDSVDGAQREIELWFQSSELLNWADGGH 179          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METBF (Nucleoside diphosphate kinase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=ndk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.423e-12
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            G+  ++  R I GATNP  +APGT+RGD A+  GRN++H SDS E+A +EIA+ F D  I
Sbjct:   77 GKDAIRVMRAINGATNPVDAAPGTVRGDFALDVGRNVVHASDSPEAAAREIAIHFKDSEI 136          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRT2 (Nucleoside diphosphate kinase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=ndk PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 8.389e-12
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG----RNIIHGSDSVESAQKEIALWF 175
            SG GV+K+ R ++GATNP  +APGTIRGD A         NI+HGSDS ESA +EI +WF
Sbjct:   76 SGPGVIKSWRDMMGATNPGDAAPGTIRGDFATAPDGDMIPNIVHGSDSEESAAREIKIWF 135          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRT1 (Nucleoside diphosphate kinase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=ndk PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 8.389e-12
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG----RNIIHGSDSVESAQKEIALWF 175
            SG GV+K+ R ++GATNP  +APGTIRGD A         NI+HGSDS ESA +EI +WF
Sbjct:   76 SGPGVIKSWRDMMGATNPGDAAPGTIRGDFATAPDGDMIPNIVHGSDSEESAAREIKIWF 135          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METTH (Nucleoside diphosphate kinase OS=Methanobacterium thermoautotrophicum GN=ndk PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 8.389e-12
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            G+  +   R ++GATNPA++  GTIRGD A+ TGRNIIH SDS ESA++EI L+F +  I +++      IYE
Sbjct:   77 GKDCISLIRKMVGATNPAEADLGTIRGDFALETGRNIIHASDSPESAEREIKLFFDESEICSYEMPDREMIYE 149          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_FRAAA4.918e-1253.45Nucleoside diphosphate kinase OS=Frankia alni (str... [more]
NDK_DESHY4.918e-1246.58Nucleoside diphosphate kinase OS=Desulfitobacteriu... [more]
NDK_DESHD4.918e-1246.58Nucleoside diphosphate kinase OS=Desulfitobacteriu... [more]
NDK_CORGL4.918e-1251.72Nucleoside diphosphate kinase OS=Corynebacterium g... [more]
NDK_CORGB4.918e-1251.72Nucleoside diphosphate kinase OS=Corynebacterium g... [more]
NDKM_MOUSE4.918e-1248.53Nucleoside diphosphate kinase, mitochondrial OS=Mu... [more]
NDK_METBF6.423e-1251.67Nucleoside diphosphate kinase OS=Methanosarcina ba... [more]
NDK_STRT28.389e-1256.67Nucleoside diphosphate kinase OS=Streptococcus the... [more]
NDK_STRT18.389e-1256.67Nucleoside diphosphate kinase OS=Streptococcus the... [more]
NDK_METTH8.389e-1249.32Nucleoside diphosphate kinase OS=Methanobacterium ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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